RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 NAT8Q9UHE5 227 aa1.13□□□□□ -2.23
XRN1-206ENST00000467077 MDN1Q9NU22 5596 aa1.13□□□□□ -2.23
XRN1-206ENST00000467077 TRBV10-2A0A0K0K1G8 114 aa1.12□□□□□ -2.23
XRN1-206ENST00000467077 TEX49A0A1B0GTD5 131 aa1.12□□□□□ -2.23
XRN1-206ENST00000467077 A6NN06 94 aa1.12□□□□□ -2.23
XRN1-206ENST00000467077 LINC00587B1AMM8 73 aa1.12□□□□□ -2.23
XRN1-206ENST00000467077 TSPEAR-AS2P59090 65 aa1.12□□□□□ -2.23
XRN1-206ENST00000467077 C4orf26Q17RF5 130 aa1.12□□□□□ -2.23
XRN1-206ENST00000467077 COMMD7Q86VX2 200 aa1.12□□□□□ -2.23
XRN1-206ENST00000467077 BAGE3Q86Y29 109 aa1.12□□□□□ -2.23
XRN1-206ENST00000467077 SPANXB1Q9NS25 103 aaPredicted RBP1.12□□□□□ -2.23
XRN1-206ENST00000467077 KMT2DO14686 5537 aa1.11□□□□□ -2.23
XRN1-206ENST00000467077 MYMXA0A1B0GTQ4 84 aa1.11□□□□□ -2.23
XRN1-206ENST00000467077 LINC01546A6NGU7 62 aa1.11□□□□□ -2.23
XRN1-206ENST00000467077 HBDP02042 147 aa1.11□□□□□ -2.23
XRN1-206ENST00000467077 NPC2P61916 151 aa1.11□□□□□ -2.23
XRN1-206ENST00000467077 PEA15Q15121 130 aa1.11□□□□□ -2.23
XRN1-206ENST00000467077 PMCHL1Q16048 86 aa1.11□□□□□ -2.23
XRN1-206ENST00000467077 OR13C6PQ8NH95 151 aa1.11□□□□□ -2.23
XRN1-206ENST00000467077 GPR98Q8WXG9 6306 aa1.1□□□□□ -2.23
XRN1-206ENST00000467077 NDUFC2O95298 119 aa1.1□□□□□ -2.23
XRN1-206ENST00000467077 MT-ND4LP03901 98 aa1.1□□□□□ -2.23
XRN1-206ENST00000467077 SPRR2EP22531 72 aa1.1□□□□□ -2.23
XRN1-206ENST00000467077 COX7BP24311 80 aa1.1□□□□□ -2.23
XRN1-206ENST00000467077 SPRR2BP35325 72 aa1.1□□□□□ -2.23
XRN1-206ENST00000467077 SPRR2AP35326 72 aa1.1□□□□□ -2.23
XRN1-206ENST00000467077 RHEBQ15382 184 aa1.1□□□□□ -2.23
XRN1-206ENST00000467077 KRTAP2-1Q9BYU5 128 aa1.1□□□□□ -2.23
XRN1-206ENST00000467077 TRBV7-7A0A0K0K1E9 115 aa1.09□□□□□ -2.23
XRN1-206ENST00000467077 F8WEM9 126 aa1.09□□□□□ -2.23
XRN1-206ENST00000467077 LST1O00453 97 aa1.09□□□□□ -2.23
XRN1-206ENST00000467077 LINC00614P0C842 121 aa1.09□□□□□ -2.23
XRN1-206ENST00000467077 ELOF1P60002 83 aaKnown RBP1.09□□□□□ -2.23
XRN1-206ENST00000467077 IFITM2Q01629 132 aa1.09□□□□□ -2.23
XRN1-206ENST00000467077 C2orf91Q6ZV80 131 aa1.09□□□□□ -2.23
XRN1-206ENST00000467077 TCTE3Q8IZS6 198 aa1.09□□□□□ -2.23
XRN1-206ENST00000467077 IGLV5-48A0A075B6I7 105 aa1.08□□□□□ -2.24
XRN1-206ENST00000467077 H3BPC8 53 aa1.08□□□□□ -2.24
XRN1-206ENST00000467077 LEPROTO15243 131 aa1.08□□□□□ -2.24
XRN1-206ENST00000467077 FABP9Q0Z7S8 132 aa1.08□□□□□ -2.24
XRN1-206ENST00000467077 SOSTDC1Q6X4U4 206 aa1.08□□□□□ -2.24
XRN1-206ENST00000467077 TRAV12-1A0A0B4J245 112 aa1.07□□□□□ -2.24
XRN1-206ENST00000467077 J3QQQ9 107 aa1.07□□□□□ -2.24
XRN1-206ENST00000467077 S100PP25815 95 aa1.07□□□□□ -2.24
XRN1-206ENST00000467077 CLEC2BQ92478 149 aa1.07□□□□□ -2.24
XRN1-206ENST00000467077 SPRR2FQ96RM1 72 aa1.07□□□□□ -2.24
XRN1-206ENST00000467077 SPANXDQ9BXN6 97 aa1.07□□□□□ -2.24
XRN1-206ENST00000467077 SEC11CQ9BY50 192 aa1.07□□□□□ -2.24
XRN1-206ENST00000467077 SPANXCQ9NY87 97 aa1.07□□□□□ -2.24
XRN1-206ENST00000467077 TRAV13-2A0A0B4J235 113 aa1.06□□□□□ -2.24
XRN1-206ENST00000467077 TRBV7-6A0A0J9YX20 115 aa1.06□□□□□ -2.24
XRN1-206ENST00000467077 ZNF815PA8K554 130 aa1.06□□□□□ -2.24
XRN1-206ENST00000467077 SPRR2DP22532 72 aa1.06□□□□□ -2.24
XRN1-206ENST00000467077 OCIAD2Q56VL3 154 aa1.06□□□□□ -2.24
XRN1-206ENST00000467077 Q5VV11 94 aa1.06□□□□□ -2.24
XRN1-206ENST00000467077 Q6JHZ5 121 aa1.06□□□□□ -2.24
XRN1-206ENST00000467077 C18orf32Q8TCD1 76 aa1.06□□□□□ -2.24
XRN1-206ENST00000467077 LINC00308Q8TCZ7 52 aa1.06□□□□□ -2.24
XRN1-206ENST00000467077 IFI27L1Q96BM0 104 aa1.06□□□□□ -2.24
XRN1-206ENST00000467077 IMUPQ9GZP8 106 aa1.06□□□□□ -2.24
XRN1-206ENST00000467077 NHP2Q9NX24 153 aaKnown RBP1.06□□□□□ -2.24
XRN1-206ENST00000467077 SS18L2Q9UHA2 77 aa1.06□□□□□ -2.24
XRN1-206ENST00000467077 MT1BP07438 61 aa1.05□□□□□ -2.24
XRN1-206ENST00000467077 PLNP26678 52 aa1.05□□□□□ -2.24
XRN1-206ENST00000467077 SPINK7P58062 85 aa1.05□□□□□ -2.24
XRN1-206ENST00000467077 SIGMAR1Q99720 223 aa1.05□□□□□ -2.24
XRN1-206ENST00000467077 PRO2289Q9P1D8 64 aa1.05□□□□□ -2.24
XRN1-206ENST00000467077 FAM236AA0A1B0GUQ0 79 aa1.04□□□□□ -2.24
XRN1-206ENST00000467077 FAM236BA0A1B0GV22 79 aa1.04□□□□□ -2.24
XRN1-206ENST00000467077 H3BUT2 72 aa1.04□□□□□ -2.24
XRN1-206ENST00000467077 DPM2O94777 84 aa1.04□□□□□ -2.24
XRN1-206ENST00000467077 Q6ZQY7 126 aa1.04□□□□□ -2.24
XRN1-206ENST00000467077 WFDC13Q8IUB5 93 aa1.04□□□□□ -2.24
XRN1-206ENST00000467077 CHCHD1Q96BP2 118 aaKnown RBP1.04□□□□□ -2.24
XRN1-206ENST00000467077 PMCHL2Q9BQD1 86 aa1.04□□□□□ -2.24
XRN1-206ENST00000467077 SNHG12Q9BXW3 62 aa1.04□□□□□ -2.24
XRN1-206ENST00000467077 A0A087WSZ3 146 aa1.03□□□□□ -2.24
XRN1-206ENST00000467077 hADV29S1A0JD25 119 aa1.03□□□□□ -2.24
XRN1-206ENST00000467077 TIMM17BO60830 172 aa1.03□□□□□ -2.24
XRN1-206ENST00000467077 IGKCP01834 107 aa1.03□□□□□ -2.24
XRN1-206ENST00000467077 LYRM7Q5U5X0 104 aa1.03□□□□□ -2.24
XRN1-206ENST00000467077 LINC00575Q6W349 94 aa1.03□□□□□ -2.24
XRN1-206ENST00000467077 TEN1Q86WV5 123 aa1.03□□□□□ -2.24
XRN1-206ENST00000467077 KRTAP8-1Q8IUC2 63 aa1.03□□□□□ -2.24
XRN1-206ENST00000467077 SMIM11BQ8TCY0 68 aa1.03□□□□□ -2.24
XRN1-206ENST00000467077 LEPROTL1O95214 131 aa1.02□□□□□ -2.25
XRN1-206ENST00000467077 FABP4P15090 132 aa1.02□□□□□ -2.25
XRN1-206ENST00000467077 KRTAP19-8Q3LI54 63 aa1.02□□□□□ -2.25
XRN1-206ENST00000467077 H1FX-AS1Q4G0G2 97 aa1.02□□□□□ -2.25
XRN1-206ENST00000467077 COPS9Q8WXC6 57 aa1.02□□□□□ -2.25
XRN1-206ENST00000467077 TTTY13Q9BZ97 58 aa1.02□□□□□ -2.25
XRN1-206ENST00000467077 HSPB8Q9UJY1 196 aa1.02□□□□□ -2.25
XRN1-206ENST00000467077 DSTQ03001 7570 aaKnown RBP1.01□□□□□ -2.25
XRN1-206ENST00000467077 C3orf79P0CE67 100 aa1.01□□□□□ -2.25
XRN1-206ENST00000467077 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.01□□□□□ -2.25
XRN1-206ENST00000467077 MUSTN1Q8IVN3 82 aa1.01□□□□□ -2.25
XRN1-206ENST00000467077 PPDPFLQ8WWR9 84 aa1.01□□□□□ -2.25
XRN1-206ENST00000467077 C12orf57Q99622 126 aa1.01□□□□□ -2.25
XRN1-206ENST00000467077 SPRR2GQ9BYE4 73 aa1.01□□□□□ -2.25
XRN1-206ENST00000467077 TMEM218A2RU14 115 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms