RNA–Protein interactions for RNA: ENST00000464756.6

NFXL1-203, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 3,865 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-203ENST00000464756 A0A1B0GU69 56 aa7.65□□□□□ -1.18
NFXL1-203ENST00000464756 COL7A1Q02388 2944 aa7.65□□□□□ -1.19
NFXL1-203ENST00000464756 A0A087X002 238 aa7.64□□□□□ -1.19
NFXL1-203ENST00000464756 NOTCH2NLQ7Z3S9 236 aa7.64□□□□□ -1.19
NFXL1-203ENST00000464756 Q8N1X5 172 aa7.64□□□□□ -1.19
NFXL1-203ENST00000464756 Q8N9P0 234 aaPredicted RBP7.64□□□□□ -1.19
NFXL1-203ENST00000464756 FP248Q71RG6 208 aaPredicted RBP7.64□□□□□ -1.19
NFXL1-203ENST00000464756 Q5XG85 94 aa7.6□□□□□ -1.19
NFXL1-203ENST00000464756 CD164Q04900 197 aa7.58□□□□□ -1.2
NFXL1-203ENST00000464756 AKAP9Q99996 3911 aa7.57□□□□□ -1.2
NFXL1-203ENST00000464756 MEGF8Q7Z7M0 2845 aa7.56□□□□□ -1.2
NFXL1-203ENST00000464756 KRTAP29-1A8MX34 341 aaPredicted RBP7.55□□□□□ -1.2
NFXL1-203ENST00000464756 HRES1P13985 223 aa7.54□□□□□ -1.2
NFXL1-203ENST00000464756 SPANXA2-OT1Q8N9U9 137 aa7.54□□□□□ -1.2
NFXL1-203ENST00000464756 LINC00483Q53H64 154 aa7.53□□□□□ -1.2
NFXL1-203ENST00000464756 ATP11AUNQ6ZP68 121 aa7.53□□□□□ -1.2
NFXL1-203ENST00000464756 KRTAP13-1Q8IUC0 172 aa7.52□□□□□ -1.21
NFXL1-203ENST00000464756 IGLV7-46A0A075B6I9 117 aa7.51□□□□□ -1.21
NFXL1-203ENST00000464756 CYP4F30PQ9H0H9 118 aa7.5□□□□□ -1.21
NFXL1-203ENST00000464756 K7ERS5 55 aa7.49□□□□□ -1.21
NFXL1-203ENST00000464756 Q5W150 140 aa7.48□□□□□ -1.21
NFXL1-203ENST00000464756 LCE6AA0A183 80 aa7.45□□□□□ -1.22
NFXL1-203ENST00000464756 ZCCHC13Q8WW36 166 aaKnown RBP7.44□□□□□ -1.22
NFXL1-203ENST00000464756 KRTAP13-2Q52LG2 175 aa7.44□□□□□ -1.22
NFXL1-203ENST00000464756 Q1T7F1 81 aa7.42□□□□□ -1.22
NFXL1-203ENST00000464756 UQCR11O14957 56 aa7.38□□□□□ -1.23
NFXL1-203ENST00000464756 J3QL48 77 aa7.37□□□□□ -1.23
NFXL1-203ENST00000464756 MIR22HGQ0VDD5 57 aa7.35□□□□□ -1.23
NFXL1-203ENST00000464756 Q5VV11 94 aa7.34□□□□□ -1.23
NFXL1-203ENST00000464756 Q5VSD8 79 aa7.34□□□□□ -1.23
NFXL1-203ENST00000464756 SPINK7P58062 85 aa7.32□□□□□ -1.24
NFXL1-203ENST00000464756 A0A0D9SG42 100 aa7.27□□□□□ -1.24
NFXL1-203ENST00000464756 A8MU10 97 aa7.26□□□□□ -1.25
NFXL1-203ENST00000464756 LINC01558Q9Y6Z2 57 aa7.26□□□□□ -1.25
NFXL1-203ENST00000464756 CDC42SE1Q9NRR8 79 aa7.25□□□□□ -1.25
NFXL1-203ENST00000464756 Q75L30 129 aa7.24□□□□□ -1.25
NFXL1-203ENST00000464756 Q6ZSA8 131 aa7.22□□□□□ -1.25
NFXL1-203ENST00000464756 KRTAP1-4P0C5Y4 121 aa7.21□□□□□ -1.26
NFXL1-203ENST00000464756 HUWE1Q7Z6Z7 4374 aaKnown RBP7.2□□□□□ -1.26
NFXL1-203ENST00000464756 DMAC1Q96GE9 116 aa7.2□□□□□ -1.26
NFXL1-203ENST00000464756 LINC01554Q52M75 96 aa7.19□□□□□ -1.26
NFXL1-203ENST00000464756 COX6B2Q6YFQ2 88 aa7.18□□□□□ -1.26
NFXL1-203ENST00000464756 ASB16-AS1Q495Z4 193 aa7.16□□□□□ -1.26
NFXL1-203ENST00000464756 LCA10Q71F78 164 aa7.14□□□□□ -1.27
NFXL1-203ENST00000464756 A0A1B0GU33 70 aa7.14□□□□□ -1.27
NFXL1-203ENST00000464756 KTN1-AS1Q86SY8 53 aa7.13□□□□□ -1.27
NFXL1-203ENST00000464756 PRAC1Q96KF2 57 aa7.13□□□□□ -1.27
NFXL1-203ENST00000464756 RBM12B-AS1Q9P1G2 102 aa7.11□□□□□ -1.27
NFXL1-203ENST00000464756 SPINT4Q6UDR6 99 aa7.1□□□□□ -1.27
NFXL1-203ENST00000464756 DNHD1Q96M86 4753 aa7.08□□□□□ -1.28
NFXL1-203ENST00000464756 KRTAP21-3Q3LHN1 58 aa7.07□□□□□ -1.28
NFXL1-203ENST00000464756 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
NFXL1-203ENST00000464756 DNAH10Q8IVF4 4471 aa7.05□□□□□ -1.28
NFXL1-203ENST00000464756 SPATA8Q6RVD6 105 aa7.03□□□□□ -1.28
NFXL1-203ENST00000464756 PLECQ15149 4684 aaKnown RBP7□□□□□ -1.29
NFXL1-203ENST00000464756 DNAH9Q9NYC9 4486 aa7□□□□□ -1.29
NFXL1-203ENST00000464756 S4R3F8 94 aa7□□□□□ -1.29
NFXL1-203ENST00000464756 ANK2Q01484 3957 aa6.99□□□□□ -1.29
NFXL1-203ENST00000464756 RPS29P62273 56 aaKnown RBP6.95□□□□□ -1.3
NFXL1-203ENST00000464756 KRTAP16-1A8MUX0 517 aa6.95□□□□□ -1.3
NFXL1-203ENST00000464756 CSAG1Q6PB30 78 aa6.93□□□□□ -1.3
NFXL1-203ENST00000464756 A8MUU9 505 aa6.9□□□□□ -1.3
NFXL1-203ENST00000464756 ADM2Q7Z4H4 148 aa6.89□□□□□ -1.31
NFXL1-203ENST00000464756 H1FX-AS1Q4G0G2 97 aa6.88□□□□□ -1.31
NFXL1-203ENST00000464756 C20orf166-AS1Q96NR2 134 aa6.88□□□□□ -1.31
NFXL1-203ENST00000464756 PRKDCP78527 4128 aaKnown RBP6.87□□□□□ -1.31
NFXL1-203ENST00000464756 DNAH11Q96DT5 4516 aa6.86□□□□□ -1.31
NFXL1-203ENST00000464756 STARD9Q9P2P6 4700 aa6.85□□□□□ -1.31
NFXL1-203ENST00000464756 A0A1B0GVY2 172 aa6.84□□□□□ -1.31
NFXL1-203ENST00000464756 KRTAP13-3Q3SY46 172 aa6.84□□□□□ -1.31
NFXL1-203ENST00000464756 RPL37P61927 97 aaKnown RBP6.84□□□□□ -1.31
NFXL1-203ENST00000464756 SEC61BP60468 96 aaKnown RBP6.82□□□□□ -1.32
NFXL1-203ENST00000464756 LYSTQ99698 3801 aa6.82□□□□□ -1.32
NFXL1-203ENST00000464756 R4GN34 69 aa6.81□□□□□ -1.32
NFXL1-203ENST00000464756 XP32Q5T750 250 aa6.8□□□□□ -1.32
NFXL1-203ENST00000464756 A6NN06 94 aa6.8□□□□□ -1.32
NFXL1-203ENST00000464756 M0R2T5 61 aa6.8□□□□□ -1.32
NFXL1-203ENST00000464756 DNAH1Q9P2D7 4330 aa6.8□□□□□ -1.32
NFXL1-203ENST00000464756 M0QZ58 72 aa6.76□□□□□ -1.33
NFXL1-203ENST00000464756 CAMK2N1Q7Z7J9 78 aa6.75□□□□□ -1.33
NFXL1-203ENST00000464756 KMT2AQ03164 3969 aa6.72□□□□□ -1.33
NFXL1-203ENST00000464756 DNAH5Q8TE73 4624 aa6.72□□□□□ -1.33
NFXL1-203ENST00000464756 FAT1Q14517 4588 aa6.7□□□□□ -1.34
NFXL1-203ENST00000464756 KRTAP10-8P60410 259 aa6.68□□□□□ -1.34
NFXL1-203ENST00000464756 H3BS24 57 aa6.67□□□□□ -1.34
NFXL1-203ENST00000464756 H0YAA0 97 aa6.63□□□□□ -1.35
NFXL1-203ENST00000464756 VPS13DQ5THJ4 4388 aa6.63□□□□□ -1.35
NFXL1-203ENST00000464756 LRP1BQ9NZR2 4599 aa6.63□□□□□ -1.35
NFXL1-203ENST00000464756 ROMO1P60602 79 aa6.63□□□□□ -1.35
NFXL1-203ENST00000464756 DNAH8Q96JB1 4490 aa6.62□□□□□ -1.35
NFXL1-203ENST00000464756 DNAH7Q8WXX0 4024 aa6.59□□□□□ -1.36
NFXL1-203ENST00000464756 P0C880 135 aa6.58□□□□□ -1.36
NFXL1-203ENST00000464756 KRTAP3-1Q9BYR8 98 aa6.58□□□□□ -1.36
NFXL1-203ENST00000464756 CMYA5Q8N3K9 4069 aa6.56□□□□□ -1.36
NFXL1-203ENST00000464756 DNAH17Q9UFH2 4485 aa6.51□□□□□ -1.37
NFXL1-203ENST00000464756 KRTAP10-4P60372 401 aaPredicted RBP6.51□□□□□ -1.37
NFXL1-203ENST00000464756 TPRXLQ17RH7 258 aa6.51□□□□□ -1.37
NFXL1-203ENST00000464756 DYNC1H1Q14204 4646 aaKnown RBP6.5□□□□□ -1.37
NFXL1-203ENST00000464756 DNAH2Q9P225 4427 aa6.5□□□□□ -1.37
NFXL1-203ENST00000464756 DNAH3Q8TD57 4116 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms