RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 LINC00269Q8N2A0 174 aa3.42□□□□□ -1.86
COL4A2-203ENST00000462309 C9orf163Q8N9P6 203 aa3.42□□□□□ -1.86
COL4A2-203ENST00000462309 WFDC9Q8NEX5 89 aa3.42□□□□□ -1.86
COL4A2-203ENST00000462309 C4orf3Q8WVX3 66 aa3.42□□□□□ -1.86
COL4A2-203ENST00000462309 LIMD2Q9BT23 127 aa3.42□□□□□ -1.86
COL4A2-203ENST00000462309 PRO2289Q9P1D8 64 aa3.42□□□□□ -1.86
COL4A2-203ENST00000462309 VPS13CQ709C8 3753 aa3.42□□□□□ -1.86
COL4A2-203ENST00000462309 NIPBLQ6KC79 2804 aaeCLIP3.42□□□□□ -1.86
COL4A2-203ENST00000462309 ATRQ13535 2644 aa3.41□□□□□ -1.86
COL4A2-203ENST00000462309 TRGV2A0A075B6R0 118 aa3.41□□□□□ -1.86
COL4A2-203ENST00000462309 GVQW2A0A096LPI5 108 aaPredicted RBP3.41□□□□□ -1.86
COL4A2-203ENST00000462309 TRAV10A0A0B4J240 114 aa3.41□□□□□ -1.86
COL4A2-203ENST00000462309 ZCCHC13Q8WW36 166 aaKnown RBP3.41□□□□□ -1.86
COL4A2-203ENST00000462309 COL6A5A8TX70 2615 aa3.4□□□□□ -1.87
COL4A2-203ENST00000462309 KRTAP6-3Q3LI67 103 aa3.4□□□□□ -1.87
COL4A2-203ENST00000462309 Q6ZQY7 126 aa3.4□□□□□ -1.87
COL4A2-203ENST00000462309 LINC00474Q9P2X8 69 aa3.4□□□□□ -1.87
COL4A2-203ENST00000462309 A0A087WSZ3 146 aa3.39□□□□□ -1.87
COL4A2-203ENST00000462309 KRTAP10-1P60331 282 aa3.39□□□□□ -1.87
COL4A2-203ENST00000462309 Q6ZTI0 123 aa3.39□□□□□ -1.87
COL4A2-203ENST00000462309 ANK3Q12955 4377 aaKnown RBP3.38□□□□□ -1.87
COL4A2-203ENST00000462309 ETDCA0A1B0GVM5 59 aa3.38□□□□□ -1.87
COL4A2-203ENST00000462309 NF1P21359 2839 aa3.38□□□□□ -1.87
COL4A2-203ENST00000462309 CASC2Q6XLA1 102 aa3.37□□□□□ -1.87
COL4A2-203ENST00000462309 HCG22E2RYF7 251 aa3.36□□□□□ -1.87
COL4A2-203ENST00000462309 NOP10Q9NPE3 64 aaKnown RBP3.36□□□□□ -1.87
COL4A2-203ENST00000462309 PRO0255Q9UI72 69 aa3.36□□□□□ -1.87
COL4A2-203ENST00000462309 IGLV5-48A0A075B6I7 105 aa3.35□□□□□ -1.87
COL4A2-203ENST00000462309 TRAV22A0A0B4J277 110 aa3.35□□□□□ -1.87
COL4A2-203ENST00000462309 IGKV3OR2-268A0A0C4DH90 116 aa3.35□□□□□ -1.87
COL4A2-203ENST00000462309 SPAG11BQ08648 103 aa3.35□□□□□ -1.87
COL4A2-203ENST00000462309 DEFB112Q30KQ8 113 aa3.35□□□□□ -1.87
COL4A2-203ENST00000462309 MXRA5Q9NR99 2828 aa3.35□□□□□ -1.87
COL4A2-203ENST00000462309 MIR22HGQ0VDD5 57 aa3.34□□□□□ -1.87
COL4A2-203ENST00000462309 STAB1Q9NY15 2570 aa3.34□□□□□ -1.88
COL4A2-203ENST00000462309 FBN1P35555 2871 aaKnown RBP3.33□□□□□ -1.88
COL4A2-203ENST00000462309 WNK1Q9H4A3 2382 aa3.33□□□□□ -1.88
COL4A2-203ENST00000462309 A0A0G2JQZ4 141 aa3.33□□□□□ -1.88
COL4A2-203ENST00000462309 KCNQ1DNQ9H478 68 aa3.33□□□□□ -1.88
COL4A2-203ENST00000462309 SVEP1Q4LDE5 3571 aa3.33□□□□□ -1.88
COL4A2-203ENST00000462309 KRTAP13-1Q8IUC0 172 aa3.32□□□□□ -1.88
COL4A2-203ENST00000462309 SPRR4Q96PI1 79 aa3.32□□□□□ -1.88
COL4A2-203ENST00000462309 LOC101927531A0A1B0GV80 90 aa3.31□□□□□ -1.88
COL4A2-203ENST00000462309 ANGP03950 147 aaKnown RBP3.31□□□□□ -1.88
COL4A2-203ENST00000462309 LINC00208Q96KT6 92 aa3.31□□□□□ -1.88
COL4A2-203ENST00000462309 CUBNO60494 3623 aa3.31□□□□□ -1.88
COL4A2-203ENST00000462309 CHKB-CPT1BH3BT56 60 aa3.3□□□□□ -1.88
COL4A2-203ENST00000462309 M0R2N4 97 aa3.3□□□□□ -1.88
COL4A2-203ENST00000462309 TPRXLQ17RH7 258 aa3.3□□□□□ -1.88
COL4A2-203ENST00000462309 LELP1Q5T871 98 aa3.3□□□□□ -1.88
COL4A2-203ENST00000462309 CDC42SE1Q9NRR8 79 aa3.3□□□□□ -1.88
COL4A2-203ENST00000462309 C1orf137Q5JT78 98 aa3.28□□□□□ -1.88
COL4A2-203ENST00000462309 Q5VV11 94 aa3.28□□□□□ -1.88
COL4A2-203ENST00000462309 KRTAP26-1Q6PEX3 210 aa3.28□□□□□ -1.88
COL4A2-203ENST00000462309 UNQ6190/PRO20217Q6UXQ8 127 aa3.28□□□□□ -1.88
COL4A2-203ENST00000462309 H3BNG1 76 aa3.27□□□□□ -1.89
COL4A2-203ENST00000462309 C10orf99Q6UWK7 81 aa3.27□□□□□ -1.89
COL4A2-203ENST00000462309 SPACA4Q8TDM5 124 aa3.27□□□□□ -1.89
COL4A2-203ENST00000462309 WFDC10AQ9H1F0 79 aa3.27□□□□□ -1.89
COL4A2-203ENST00000462309 MGAM2Q2M2H8 2515 aa3.27□□□□□ -1.89
COL4A2-203ENST00000462309 DEFB130BP0DP73 79 aa3.26□□□□□ -1.89
COL4A2-203ENST00000462309 DEFB130AP0DP74 79 aa3.26□□□□□ -1.89
COL4A2-203ENST00000462309 DEFB136Q30KP8 78 aa3.26□□□□□ -1.89
COL4A2-203ENST00000462309 Q6ZRX8 168 aa3.26□□□□□ -1.89
COL4A2-203ENST00000462309 PRR15LQ9BU68 103 aa3.26□□□□□ -1.89
COL4A2-203ENST00000462309 TP53AIP1Q9HCN2 124 aa3.26□□□□□ -1.89
COL4A2-203ENST00000462309 C6orf48Q9UBA6 75 aa3.26□□□□□ -1.89
COL4A2-203ENST00000462309 C9orf116Q5BN46 136 aaPredicted RBP3.25□□□□□ -1.89
COL4A2-203ENST00000462309 CLPSL2Q6UWE3 100 aa3.25□□□□□ -1.89
COL4A2-203ENST00000462309 LINC01558Q9Y6Z2 57 aa3.25□□□□□ -1.89
COL4A2-203ENST00000462309 TENM1Q9UKZ4 2725 aa3.24□□□□□ -1.89
COL4A2-203ENST00000462309 H0Y9P7 68 aa3.24□□□□□ -1.89
COL4A2-203ENST00000462309 CNBPP62633 177 aaKnown RBP3.24□□□□□ -1.89
COL4A2-203ENST00000462309 SPART-AS1P0CW21 52 aa3.23□□□□□ -1.89
COL4A2-203ENST00000462309 SPRR1AP35321 89 aa3.23□□□□□ -1.89
COL4A2-203ENST00000462309 SPTSSBQ8NFR3 76 aa3.23□□□□□ -1.89
COL4A2-203ENST00000462309 NBEAL1Q6ZS30 2694 aa3.23□□□□□ -1.89
COL4A2-203ENST00000462309 SORL1Q92673 2214 aa3.22□□□□□ -1.89
COL4A2-203ENST00000462309 K7EQZ3 153 aa3.22□□□□□ -1.89
COL4A2-203ENST00000462309 FBN3Q75N90 2809 aa3.22□□□□□ -1.89
COL4A2-203ENST00000462309 TRRAPQ9Y4A5 3859 aa3.22□□□□□ -1.89
COL4A2-203ENST00000462309 COA5Q86WW8 74 aa3.21□□□□□ -1.9
COL4A2-203ENST00000462309 DEFB131BA0A096LNP1 70 aa3.2□□□□□ -1.9
COL4A2-203ENST00000462309 DEFB105AQ8NG35 78 aa3.2□□□□□ -1.9
COL4A2-203ENST00000462309 DNHD1Q96M86 4753 aa3.2□□□□□ -1.9
COL4A2-203ENST00000462309 ANK2Q01484 3957 aa3.19□□□□□ -1.9
COL4A2-203ENST00000462309 PLAC8Q9NZF1 115 aa3.19□□□□□ -1.9
COL4A2-203ENST00000462309 NOTCH1P46531 2555 aa3.19□□□□□ -1.9
COL4A2-203ENST00000462309 RPL37AP61513 92 aaKnown RBP3.18□□□□□ -1.9
COL4A2-203ENST00000462309 PKD1L1Q8TDX9 2849 aa3.17□□□□□ -1.9
COL4A2-203ENST00000462309 A0A096LPF7 62 aa3.17□□□□□ -1.9
COL4A2-203ENST00000462309 LINC01556Q5JQF7 62 aa3.17□□□□□ -1.9
COL4A2-203ENST00000462309 CSAG1Q6PB30 78 aa3.17□□□□□ -1.9
COL4A2-203ENST00000462309 SPRR1BP22528 89 aa3.16□□□□□ -1.9
COL4A2-203ENST00000462309 WFDC10BQ8IUB3 73 aa3.16□□□□□ -1.9
COL4A2-203ENST00000462309 WFDC13Q8IUB5 93 aa3.16□□□□□ -1.9
COL4A2-203ENST00000462309 VWFP04275 2813 aa3.16□□□□□ -1.9
COL4A2-203ENST00000462309 KRTAP12-3P60328 96 aa3.15□□□□□ -1.91
COL4A2-203ENST00000462309 K7EIL1 84 aa3.14□□□□□ -1.91
COL4A2-203ENST00000462309 CMYA5Q8N3K9 4069 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms