RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 CXCL6P80162 114 aa8.83□□□□□ -1
SF3A3-203ENST00000461869 ASB16-AS1Q495Z4 193 aa8.83□□□□□ -1
SF3A3-203ENST00000461869 MUC17Q685J3 4493 aa8.82□□□□□ -1
SF3A3-203ENST00000461869 J3KT08 172 aa8.81□□□□□ -1
SF3A3-203ENST00000461869 SIGMAR1Q99720 223 aa8.81□□□□□ -1
SF3A3-203ENST00000461869 LINC00472Q9H8W2 130 aa8.79□□□□□ -1
SF3A3-203ENST00000461869 IGKV3D-7A0A0C4DH55 119 aa8.78□□□□□ -1
SF3A3-203ENST00000461869 MT-ATP8P03928 68 aa8.78□□□□□ -1
SF3A3-203ENST00000461869 IMUPQ9GZP8 106 aa8.78□□□□□ -1
SF3A3-203ENST00000461869 Q96NJ1 140 aa8.75□□□□□ -1.01
SF3A3-203ENST00000461869 IGKV4-1P06312 121 aa8.73□□□□□ -1.01
SF3A3-203ENST00000461869 NDUFB1O75438 58 aa8.72□□□□□ -1.01
SF3A3-203ENST00000461869 A8MWP4 228 aa8.71□□□□□ -1.02
SF3A3-203ENST00000461869 DSCR10P59022 87 aa8.71□□□□□ -1.02
SF3A3-203ENST00000461869 HIST1H4AP62805 103 aaKnown RBP8.71□□□□□ -1.02
SF3A3-203ENST00000461869 DEFB116Q30KQ4 102 aa8.71□□□□□ -1.02
SF3A3-203ENST00000461869 C1orf195Q5TG92 126 aa8.7□□□□□ -1.02
SF3A3-203ENST00000461869 K7EQZ3 153 aa8.67□□□□□ -1.02
SF3A3-203ENST00000461869 FP248Q71RG6 208 aaPredicted RBP8.67□□□□□ -1.02
SF3A3-203ENST00000461869 LCE2DQ5TA82 110 aaPredicted RBP8.66□□□□□ -1.02
SF3A3-203ENST00000461869 PRR15Q8IV56 129 aa8.66□□□□□ -1.02
SF3A3-203ENST00000461869 Q8N9L7 120 aa8.65□□□□□ -1.02
SF3A3-203ENST00000461869 A0A1B0GVX0 72 aa8.64□□□□□ -1.03
SF3A3-203ENST00000461869 KRTAP13-3Q3SY46 172 aa8.63□□□□□ -1.03
SF3A3-203ENST00000461869 A0A087WVE0 104 aa8.61□□□□□ -1.03
SF3A3-203ENST00000461869 C8orf87E5RJ46 101 aa8.6□□□□□ -1.03
SF3A3-203ENST00000461869 SCGB1A1P11684 91 aa8.6□□□□□ -1.03
SF3A3-203ENST00000461869 KRTAP4-1Q9BYQ7 146 aa8.6□□□□□ -1.03
SF3A3-203ENST00000461869 IGHV6-1A0A0B4J1U7 121 aa8.59□□□□□ -1.03
SF3A3-203ENST00000461869 FAM236AA0A1B0GUQ0 79 aa8.59□□□□□ -1.03
SF3A3-203ENST00000461869 FAM236BA0A1B0GV22 79 aa8.59□□□□□ -1.03
SF3A3-203ENST00000461869 HCG22E2RYF7 251 aa8.59□□□□□ -1.03
SF3A3-203ENST00000461869 SEC61BP60468 96 aaKnown RBP8.59□□□□□ -1.03
SF3A3-203ENST00000461869 CRCT1Q9UGL9 99 aa8.59□□□□□ -1.03
SF3A3-203ENST00000461869 FSIP2Q5CZC0 6907 aa8.58□□□□□ -1.04
SF3A3-203ENST00000461869 C8orf17Q9NRJ1 99 aa8.56□□□□□ -1.04
SF3A3-203ENST00000461869 MMP24-AS1A0A0U1RRL7 71 aa8.55□□□□□ -1.04
SF3A3-203ENST00000461869 CASC2Q6XLA1 102 aa8.54□□□□□ -1.04
SF3A3-203ENST00000461869 LINC00313P59037 77 aa8.53□□□□□ -1.04
SF3A3-203ENST00000461869 hDV103S1A0JD37 113 aa8.52□□□□□ -1.05
SF3A3-203ENST00000461869 ATOX1O00244 68 aa8.52□□□□□ -1.05
SF3A3-203ENST00000461869 WFDC13Q8IUB5 93 aa8.51□□□□□ -1.05
SF3A3-203ENST00000461869 TMEM254Q8TBM7 123 aa8.5□□□□□ -1.05
SF3A3-203ENST00000461869 SMIM20Q8N5G0 67 aa8.48□□□□□ -1.05
SF3A3-203ENST00000461869 MRPL34Q9BQ48 92 aaKnown RBP8.47□□□□□ -1.05
SF3A3-203ENST00000461869 XP32Q5T750 250 aa8.45□□□□□ -1.06
SF3A3-203ENST00000461869 LCE2CQ5TA81 110 aa8.45□□□□□ -1.06
SF3A3-203ENST00000461869 NOTCH2NLQ7Z3S9 236 aa8.45□□□□□ -1.06
SF3A3-203ENST00000461869 ANAPC13Q9BS18 74 aa8.41□□□□□ -1.06
SF3A3-203ENST00000461869 TP53AIP1Q9HCN2 124 aa8.41□□□□□ -1.06
SF3A3-203ENST00000461869 KRTAP16-1A8MUX0 517 aa8.4□□□□□ -1.06
SF3A3-203ENST00000461869 TRAV7A0A075B6U4 112 aa8.39□□□□□ -1.07
SF3A3-203ENST00000461869 C9orf92A6NGG3 77 aa8.39□□□□□ -1.07
SF3A3-203ENST00000461869 NDUFS5O43920 106 aa8.39□□□□□ -1.07
SF3A3-203ENST00000461869 MT1HP80294 61 aa8.38□□□□□ -1.07
SF3A3-203ENST00000461869 KRTAP19-2Q3LHN2 52 aa8.38□□□□□ -1.07
SF3A3-203ENST00000461869 SERP2Q8N6R1 65 aa8.38□□□□□ -1.07
SF3A3-203ENST00000461869 Q8N9P0 234 aaPredicted RBP8.38□□□□□ -1.07
SF3A3-203ENST00000461869 OCR1Q9BZK8 76 aa8.38□□□□□ -1.07
SF3A3-203ENST00000461869 UQCRQO14949 82 aa8.36□□□□□ -1.07
SF3A3-203ENST00000461869 PCOTHQ58A44 107 aa8.33□□□□□ -1.08
SF3A3-203ENST00000461869 C20orf166-AS1Q96NR2 134 aa8.33□□□□□ -1.08
SF3A3-203ENST00000461869 A8MUU9 505 aa8.31□□□□□ -1.08
SF3A3-203ENST00000461869 COX7CP15954 63 aa8.31□□□□□ -1.08
SF3A3-203ENST00000461869 TRAV22A0A0B4J277 110 aa8.3□□□□□ -1.08
SF3A3-203ENST00000461869 C5orf47Q569G3 176 aa8.3□□□□□ -1.08
SF3A3-203ENST00000461869 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
SF3A3-203ENST00000461869 Q75L30 129 aa8.29□□□□□ -1.08
SF3A3-203ENST00000461869 MP68P56378 58 aa8.28□□□□□ -1.08
SF3A3-203ENST00000461869 KRTAP10-6P60371 365 aaPredicted RBP8.27□□□□□ -1.09
SF3A3-203ENST00000461869 H0Y9P7 68 aa8.25□□□□□ -1.09
SF3A3-203ENST00000461869 H3BPC8 53 aa8.25□□□□□ -1.09
SF3A3-203ENST00000461869 PCP4P48539 62 aa8.25□□□□□ -1.09
SF3A3-203ENST00000461869 M0R2T5 61 aa8.23□□□□□ -1.09
SF3A3-203ENST00000461869 RPL37P61927 97 aaKnown RBP8.23□□□□□ -1.09
SF3A3-203ENST00000461869 ZCCHC13Q8WW36 166 aaKnown RBP8.23□□□□□ -1.09
SF3A3-203ENST00000461869 C20orf197Q8N268 126 aa8.2□□□□□ -1.1
SF3A3-203ENST00000461869 ATP11AUNQ6ZP68 121 aa8.19□□□□□ -1.1
SF3A3-203ENST00000461869 Q5W150 140 aa8.18□□□□□ -1.1
SF3A3-203ENST00000461869 LOC101927531A0A1B0GV80 90 aa8.17□□□□□ -1.1
SF3A3-203ENST00000461869 KLKP1Q107X0 134 aa8.17□□□□□ -1.1
SF3A3-203ENST00000461869 LINC00208Q96KT6 92 aa8.17□□□□□ -1.1
SF3A3-203ENST00000461869 CCDC179H3BU77 68 aa8.16□□□□□ -1.1
SF3A3-203ENST00000461869 C1orf64Q8NEQ6 169 aa8.16□□□□□ -1.1
SF3A3-203ENST00000461869 COX6B2Q6YFQ2 88 aa8.15□□□□□ -1.1
SF3A3-203ENST00000461869 NDUFC1O43677 76 aa8.12□□□□□ -1.11
SF3A3-203ENST00000461869 SNURFQ9Y675 71 aa8.12□□□□□ -1.11
SF3A3-203ENST00000461869 IGKV2-30P06310 120 aa8.11□□□□□ -1.11
SF3A3-203ENST00000461869 C7orf65Q6ZTY9 151 aa8.1□□□□□ -1.11
SF3A3-203ENST00000461869 IGKV2D-30A0A075B6S6 120 aa8.07□□□□□ -1.12
SF3A3-203ENST00000461869 FLGP20930 4061 aaPredicted RBP8.07□□□□□ -1.12
SF3A3-203ENST00000461869 CYP4F30PQ9H0H9 118 aa8.06□□□□□ -1.12
SF3A3-203ENST00000461869 KRTAP9-7A8MTY7 169 aa8.03□□□□□ -1.12
SF3A3-203ENST00000461869 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.02□□□□□ -1.13
SF3A3-203ENST00000461869 H7BZZ5 65 aa8.01□□□□□ -1.13
SF3A3-203ENST00000461869 SPINK7P58062 85 aa8.01□□□□□ -1.13
SF3A3-203ENST00000461869 CYSTM1Q9H1C7 97 aa8□□□□□ -1.13
SF3A3-203ENST00000461869 TMEM258P61165 79 aa7.97□□□□□ -1.13
SF3A3-203ENST00000461869 SPANXA2-OT1Q8N9U9 137 aa7.96□□□□□ -1.14
SF3A3-203ENST00000461869 ATP5EP56381 51 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms