RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 CNFNQ9BYD5 112 aa1.06□□□□□ -2.24
HMGB1P26-201ENST00000452520 FRAS1Q86XX4 4008 aa1.05□□□□□ -2.24
HMGB1P26-201ENST00000452520 STAB2Q8WWQ8 2551 aa1.05□□□□□ -2.24
HMGB1P26-201ENST00000452520 DNAH3Q8TD57 4116 aa1.05□□□□□ -2.24
HMGB1P26-201ENST00000452520 HMGN3Q15651 99 aa1.05□□□□□ -2.24
HMGB1P26-201ENST00000452520 SPCS1Q9Y6A9 102 aa1.05□□□□□ -2.24
HMGB1P26-201ENST00000452520 CSMD3Q7Z407 3707 aa1.05□□□□□ -2.24
HMGB1P26-201ENST00000452520 HSPG2P98160 4391 aa1.04□□□□□ -2.24
HMGB1P26-201ENST00000452520 H3BQF6 201 aa1.04□□□□□ -2.24
HMGB1P26-201ENST00000452520 H3BSH0 61 aa1.04□□□□□ -2.24
HMGB1P26-201ENST00000452520 LEPROTL1O95214 131 aa1.04□□□□□ -2.24
HMGB1P26-201ENST00000452520 SMIM11AP58511 58 aa1.04□□□□□ -2.24
HMGB1P26-201ENST00000452520 TDRG1Q3Y452 100 aa1.04□□□□□ -2.24
HMGB1P26-201ENST00000452520 STARD9Q9P2P6 4700 aa1.04□□□□□ -2.24
HMGB1P26-201ENST00000452520 NCBP2-AS2Q69YL0 99 aa1.03□□□□□ -2.24
HMGB1P26-201ENST00000452520 TP53AIP1Q9HCN2 124 aa1.03□□□□□ -2.24
HMGB1P26-201ENST00000452520 FAT2Q9NYQ8 4349 aa1.03□□□□□ -2.24
HMGB1P26-201ENST00000452520 VPS13DQ5THJ4 4388 aa1.03□□□□□ -2.24
HMGB1P26-201ENST00000452520 ALMS1Q8TCU4 4167 aa1.03□□□□□ -2.25
HMGB1P26-201ENST00000452520 D6R8Y8 96 aa1.02□□□□□ -2.25
HMGB1P26-201ENST00000452520 MRPL33O75394 65 aaKnown RBP1.02□□□□□ -2.25
HMGB1P26-201ENST00000452520 PEA15Q15121 130 aa1.02□□□□□ -2.25
HMGB1P26-201ENST00000452520 MUSTN1Q8IVN3 82 aa1.02□□□□□ -2.25
HMGB1P26-201ENST00000452520 DEFB108BQ8NET1 73 aa1.02□□□□□ -2.25
HMGB1P26-201ENST00000452520 PRO0255Q9UI72 69 aa1.02□□□□□ -2.25
HMGB1P26-201ENST00000452520 KMT2AQ03164 3969 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 DNAH17Q9UFH2 4485 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 SRRM2Q9UQ35 2752 aaKnown RBP1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 H0Y9P7 68 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 H3BUX3 64 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 I3L2K1 104 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 SMR3BP02814 79 aaPredicted RBP1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 ALKAL2Q6UX46 152 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 WFDC9Q8NEX5 89 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 DNAH2Q9P225 4427 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 HECTD4Q9Y4D8 3996 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 LYSTQ99698 3801 aa1□□□□□ -2.25
HMGB1P26-201ENST00000452520 DNAH7Q8WXX0 4024 aa1□□□□□ -2.25
HMGB1P26-201ENST00000452520 DNAH11Q96DT5 4516 aa1□□□□□ -2.25
HMGB1P26-201ENST00000452520 GNGT1P63211 74 aa1□□□□□ -2.25
HMGB1P26-201ENST00000452520 FAT1Q14517 4588 aa1□□□□□ -2.25
HMGB1P26-201ENST00000452520 PKHD1P08F94 4074 aa0.99□□□□□ -2.25
HMGB1P26-201ENST00000452520 MYCBP2O75592 4640 aa0.99□□□□□ -2.25
HMGB1P26-201ENST00000452520 LINC00959A0A1B0GUT2 108 aa0.99□□□□□ -2.25
HMGB1P26-201ENST00000452520 DEFB136Q30KP8 78 aa0.99□□□□□ -2.25
HMGB1P26-201ENST00000452520 RABAC1Q9UI14 185 aa0.99□□□□□ -2.25
HMGB1P26-201ENST00000452520 APOBP04114 4563 aaKnown RBP0.99□□□□□ -2.25
HMGB1P26-201ENST00000452520 HMCN2Q8NDA2 5059 aa0.98□□□□□ -2.25
HMGB1P26-201ENST00000452520 LRP1BQ9NZR2 4599 aa0.98□□□□□ -2.25
HMGB1P26-201ENST00000452520 HMGN2P05204 90 aaKnown RBP0.98□□□□□ -2.25
HMGB1P26-201ENST00000452520 Q5VSD8 79 aa0.98□□□□□ -2.25
HMGB1P26-201ENST00000452520 C6orf201Q7Z4U5 140 aa0.98□□□□□ -2.25
HMGB1P26-201ENST00000452520 RNF213Q63HN8 5207 aa0.98□□□□□ -2.25
HMGB1P26-201ENST00000452520 DNAH6Q9C0G6 4158 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 DNAH5Q8TE73 4624 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 FSIP2Q5CZC0 6907 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 TRBV7-4A0A0J9YYF1 115 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 A0A1B0GU69 56 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 KRTAP2-3P0C7H8 128 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 KRTAP2-4Q9BYR9 128 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 KRTAP2-1Q9BYU5 128 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 HILPDAQ9Y5L2 63 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 TNCP24821 2201 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 DEFB4AO15263 64 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 PRH1P02810 166 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 PIGYQ3MUY2 71 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 NMSQ5H8A3 153 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 KRTAP5-10Q6L8G5 202 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 Q8IZM0 81 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 VPS13BQ7Z7G8 4022 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 PKD1P98161 4303 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 LRP2P98164 4655 aa0.95□□□□□ -2.26
HMGB1P26-201ENST00000452520 DMBT1Q9UGM3 2413 aaPredicted RBP0.95□□□□□ -2.26
HMGB1P26-201ENST00000452520 PKHD1L1Q86WI1 4243 aa0.95□□□□□ -2.26
HMGB1P26-201ENST00000452520 SPINK6Q6UWN8 80 aa0.95□□□□□ -2.26
HMGB1P26-201ENST00000452520 APLNQ9ULZ1 77 aa0.95□□□□□ -2.26
HMGB1P26-201ENST00000452520 FAT4Q6V0I7 4981 aa0.95□□□□□ -2.26
HMGB1P26-201ENST00000452520 IQCF6A8MYZ5 107 aa0.94□□□□□ -2.26
HMGB1P26-201ENST00000452520 WFDC2Q14508 124 aa0.94□□□□□ -2.26
HMGB1P26-201ENST00000452520 RPS27LQ71UM5 84 aaKnown RBP0.94□□□□□ -2.26
HMGB1P26-201ENST00000452520 HTN3P15516 51 aa0.93□□□□□ -2.26
HMGB1P26-201ENST00000452520 DEFB135Q30KP9 77 aa0.93□□□□□ -2.26
HMGB1P26-201ENST00000452520 FAT3Q8TDW7 4589 aa0.93□□□□□ -2.26
HMGB1P26-201ENST00000452520 LRP1Q07954 4544 aaKnown RBP0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 FXYD6-FXYD2A0A087WZ82 144 aa0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 IGLC2P0DOY2 106 aa0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 IGLC3P0DOY3 106 aa0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 LELP1Q5T871 98 aa0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 LINC00643Q86TS7 51 aa0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 DEFB104AQ8WTQ1 72 aa0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 UBE2D4Q9Y2X8 147 aa0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 LPAP08519 4548 aa0.91□□□□□ -2.26
HMGB1P26-201ENST00000452520 DEFB131BA0A096LNP1 70 aa0.91□□□□□ -2.26
HMGB1P26-201ENST00000452520 M0R1W7 72 aa0.91□□□□□ -2.26
HMGB1P26-201ENST00000452520 MUC2Q02817 5179 aa0.91□□□□□ -2.26
HMGB1P26-201ENST00000452520 DEFA5Q01523 94 aa0.9□□□□□ -2.27
HMGB1P26-201ENST00000452520 LEAP2Q969E1 77 aa0.9□□□□□ -2.27
HMGB1P26-201ENST00000452520 GAFA1Q96PS6 74 aa0.9□□□□□ -2.27
HMGB1P26-201ENST00000452520 S100A13Q99584 98 aa0.9□□□□□ -2.27
HMGB1P26-201ENST00000452520 MYMXA0A1B0GTQ4 84 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms