RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 ZNF706Q9Y5V0 76 aaPredicted RBP5.6□□□□□ -1.51
LINC01238-204ENST00000451070 IGKV3D-7A0A0C4DH55 119 aa5.59□□□□□ -1.51
LINC01238-204ENST00000451070 KRTAP13-3Q3SY46 172 aa5.59□□□□□ -1.51
LINC01238-204ENST00000451070 CLEC2BQ92478 149 aa5.59□□□□□ -1.51
LINC01238-204ENST00000451070 LINC00483Q53H64 154 aa5.58□□□□□ -1.52
LINC01238-204ENST00000451070 NDUFA12Q9UI09 145 aa5.58□□□□□ -1.52
LINC01238-204ENST00000451070 ETDCA0A1B0GVM5 59 aa5.57□□□□□ -1.52
LINC01238-204ENST00000451070 TMEM256-PLSCR3K7ERE1 68 aa5.57□□□□□ -1.52
LINC01238-204ENST00000451070 ATP11AUNQ6ZP68 121 aa5.57□□□□□ -1.52
LINC01238-204ENST00000451070 A0A087WVE0 104 aa5.56□□□□□ -1.52
LINC01238-204ENST00000451070 SPINK1P00995 79 aa5.56□□□□□ -1.52
LINC01238-204ENST00000451070 TSPEAR-AS2P59090 65 aa5.56□□□□□ -1.52
LINC01238-204ENST00000451070 MPLKIPQ8TAP9 179 aa5.56□□□□□ -1.52
LINC01238-204ENST00000451070 KRTAP4-1Q9BYQ7 146 aa5.56□□□□□ -1.52
LINC01238-204ENST00000451070 LINC00846Q9NV44 126 aa5.56□□□□□ -1.52
LINC01238-204ENST00000451070 CXCL6P80162 114 aa5.55□□□□□ -1.52
LINC01238-204ENST00000451070 ASB16-AS1Q495Z4 193 aa5.55□□□□□ -1.52
LINC01238-204ENST00000451070 ADAMTSL4-AS1Q5T5F5 129 aa5.55□□□□□ -1.52
LINC01238-204ENST00000451070 Q9BRP9 147 aa5.55□□□□□ -1.52
LINC01238-204ENST00000451070 C7orf65Q6ZTY9 151 aa5.54□□□□□ -1.52
LINC01238-204ENST00000451070 LITAFQ99732 161 aa5.54□□□□□ -1.52
LINC01238-204ENST00000451070 TRAV23DV6A0A075B6W5 121 aa5.53□□□□□ -1.52
LINC01238-204ENST00000451070 IGLV9-49A0A0B4J1Y8 123 aa5.53□□□□□ -1.52
LINC01238-204ENST00000451070 MOBPQ13875 183 aa5.53□□□□□ -1.52
LINC01238-204ENST00000451070 Q8N377 158 aa5.53□□□□□ -1.52
LINC01238-204ENST00000451070 RPS29P62273 56 aaKnown RBP5.52□□□□□ -1.53
LINC01238-204ENST00000451070 Q6ZRX8 168 aa5.52□□□□□ -1.53
LINC01238-204ENST00000451070 SSBP3-AS1Q7Z2R9 100 aa5.52□□□□□ -1.53
LINC01238-204ENST00000451070 TRBV7-4A0A0J9YYF1 115 aa5.51□□□□□ -1.53
LINC01238-204ENST00000451070 hDV103S1A0JD37 113 aa5.51□□□□□ -1.53
LINC01238-204ENST00000451070 A8MUN3 132 aa5.51□□□□□ -1.53
LINC01238-204ENST00000451070 SOSTDC1Q6X4U4 206 aa5.51□□□□□ -1.53
LINC01238-204ENST00000451070 A6NN06 94 aa5.5□□□□□ -1.53
LINC01238-204ENST00000451070 IGLV6-57P01721 117 aa5.5□□□□□ -1.53
LINC01238-204ENST00000451070 JMJD7-PLA2G4BH0Y9G9 81 aa5.49□□□□□ -1.53
LINC01238-204ENST00000451070 SEC61BP60468 96 aaKnown RBP5.49□□□□□ -1.53
LINC01238-204ENST00000451070 UBL5Q9BZL1 73 aa5.49□□□□□ -1.53
LINC01238-204ENST00000451070 CYP4F30PQ9H0H9 118 aa5.49□□□□□ -1.53
LINC01238-204ENST00000451070 H0YGX0 51 aa5.48□□□□□ -1.53
LINC01238-204ENST00000451070 LINC01547P58512 204 aaPredicted RBP5.47□□□□□ -1.53
LINC01238-204ENST00000451070 XP32Q5T750 250 aa5.47□□□□□ -1.53
LINC01238-204ENST00000451070 ST20-AS1Q8NBB2 130 aa5.47□□□□□ -1.53
LINC01238-204ENST00000451070 SNURFQ9Y675 71 aa5.47□□□□□ -1.53
LINC01238-204ENST00000451070 TMEM254Q8TBM7 123 aa5.46□□□□□ -1.54
LINC01238-204ENST00000451070 TRAV22A0A0B4J277 110 aa5.45□□□□□ -1.54
LINC01238-204ENST00000451070 C14orf132Q9NPU4 83 aa5.44□□□□□ -1.54
LINC01238-204ENST00000451070 LIMD2Q9BT23 127 aa5.43□□□□□ -1.54
LINC01238-204ENST00000451070 SPRR1BP22528 89 aa5.42□□□□□ -1.54
LINC01238-204ENST00000451070 MP68P56378 58 aa5.42□□□□□ -1.54
LINC01238-204ENST00000451070 KRTAP19-2Q3LHN2 52 aa5.42□□□□□ -1.54
LINC01238-204ENST00000451070 NREPQ16612 68 aa5.41□□□□□ -1.54
LINC01238-204ENST00000451070 LINC00308Q8TCZ7 52 aa5.41□□□□□ -1.54
LINC01238-204ENST00000451070 LINC01554Q52M75 96 aa5.4□□□□□ -1.54
LINC01238-204ENST00000451070 PDE6GP18545 87 aa5.39□□□□□ -1.55
LINC01238-204ENST00000451070 Q5VV11 94 aa5.39□□□□□ -1.55
LINC01238-204ENST00000451070 FAM218AQ96MZ4 157 aa5.39□□□□□ -1.55
LINC01238-204ENST00000451070 ORMDL1Q9P0S3 153 aa5.39□□□□□ -1.55
LINC01238-204ENST00000451070 H3BQ85 93 aa5.38□□□□□ -1.55
LINC01238-204ENST00000451070 LINC00313P59037 77 aa5.38□□□□□ -1.55
LINC01238-204ENST00000451070 PCOTHQ58A44 107 aa5.38□□□□□ -1.55
LINC01238-204ENST00000451070 DHRS4-AS1Q9P1J3 65 aa5.38□□□□□ -1.55
LINC01238-204ENST00000451070 LOC110117498A0A087WWA1 95 aa5.37□□□□□ -1.55
LINC01238-204ENST00000451070 C9orf92A6NGG3 77 aa5.37□□□□□ -1.55
LINC01238-204ENST00000451070 HCG22E2RYF7 251 aa5.37□□□□□ -1.55
LINC01238-204ENST00000451070 ELOF1P60002 83 aaKnown RBP5.37□□□□□ -1.55
LINC01238-204ENST00000451070 CDC42SE1Q9NRR8 79 aa5.37□□□□□ -1.55
LINC01238-204ENST00000451070 MT1HP80294 61 aa5.36□□□□□ -1.55
LINC01238-204ENST00000451070 C6orf99Q4VX62 202 aa5.36□□□□□ -1.55
LINC01238-204ENST00000451070 Q75L30 129 aa5.36□□□□□ -1.55
LINC01238-204ENST00000451070 PSPHP1O15172 72 aa5.35□□□□□ -1.55
LINC01238-204ENST00000451070 COX7BP24311 80 aa5.35□□□□□ -1.55
LINC01238-204ENST00000451070 C1orf64Q8NEQ6 169 aa5.35□□□□□ -1.55
LINC01238-204ENST00000451070 IGLV8-61A0A075B6I0 122 aa5.34□□□□□ -1.55
LINC01238-204ENST00000451070 LOC101927531A0A1B0GV80 90 aa5.34□□□□□ -1.55
LINC01238-204ENST00000451070 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.55
LINC01238-204ENST00000451070 CHKB-CPT1BH3BT56 60 aa5.33□□□□□ -1.56
LINC01238-204ENST00000451070 SMIM29Q86T20 159 aa5.33□□□□□ -1.56
LINC01238-204ENST00000451070 DEFB105AQ8NG35 78 aa5.33□□□□□ -1.56
LINC01238-204ENST00000451070 OCR1Q9BZK8 76 aa5.33□□□□□ -1.56
LINC01238-204ENST00000451070 BPY2O14599 106 aa5.32□□□□□ -1.56
LINC01238-204ENST00000451070 A0A0G2JQZ4 141 aa5.31□□□□□ -1.56
LINC01238-204ENST00000451070 NOTCH2NLQ7Z3S9 236 aa5.31□□□□□ -1.56
LINC01238-204ENST00000451070 SPTSSBQ8NFR3 76 aa5.31□□□□□ -1.56
LINC01238-204ENST00000451070 FSIP2Q5CZC0 6907 aa5.3□□□□□ -1.56
LINC01238-204ENST00000451070 IGLV5-48A0A075B6I7 105 aa5.3□□□□□ -1.56
LINC01238-204ENST00000451070 NDUFB1O75438 58 aa5.3□□□□□ -1.56
LINC01238-204ENST00000451070 Q6ZQT0 140 aa5.29□□□□□ -1.56
LINC01238-204ENST00000451070 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
LINC01238-204ENST00000451070 ZCCHC13Q8WW36 166 aaKnown RBP5.28□□□□□ -1.56
LINC01238-204ENST00000451070 A0A0A0MQY5 61 aa5.27□□□□□ -1.57
LINC01238-204ENST00000451070 KRTAP10-6P60371 365 aaPredicted RBP5.27□□□□□ -1.57
LINC01238-204ENST00000451070 RPL37P61927 97 aaKnown RBP5.27□□□□□ -1.57
LINC01238-204ENST00000451070 Q8N9P0 234 aaPredicted RBP5.27□□□□□ -1.57
LINC01238-204ENST00000451070 SMIM11BQ8TCY0 68 aa5.27□□□□□ -1.57
LINC01238-204ENST00000451070 FLGP20930 4061 aaPredicted RBP5.26□□□□□ -1.57
LINC01238-204ENST00000451070 A0A1B0GW54 56 aa5.24□□□□□ -1.57
LINC01238-204ENST00000451070 A6NED7 52 aa5.24□□□□□ -1.57
LINC01238-204ENST00000451070 SPANXA2-OT1Q8N9U9 137 aa5.24□□□□□ -1.57
LINC01238-204ENST00000451070 IGHV6-1A0A0B4J1U7 121 aa5.23□□□□□ -1.57
LINC01238-204ENST00000451070 CASC2Q6XLA1 102 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms