RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 JMJD7-PLA2G4BH0Y9G9 81 aa5.9□□□□□ -1.46
NPIPB3-202ENST00000448012 ACYP1P07311 99 aa5.89□□□□□ -1.47
NPIPB3-202ENST00000448012 COX6B2Q6YFQ2 88 aa5.89□□□□□ -1.47
NPIPB3-202ENST00000448012 C14orf132Q9NPU4 83 aa5.89□□□□□ -1.47
NPIPB3-202ENST00000448012 NDUFV3P56181 108 aaKnown RBP5.88□□□□□ -1.47
NPIPB3-202ENST00000448012 ATP11AUNQ6ZP68 121 aa5.88□□□□□ -1.47
NPIPB3-202ENST00000448012 KRTAP4-12Q9BQ66 201 aa5.88□□□□□ -1.47
NPIPB3-202ENST00000448012 A0A1B0GV72 72 aa5.85□□□□□ -1.47
NPIPB3-202ENST00000448012 LOC110117498A0A087WWA1 95 aa5.84□□□□□ -1.47
NPIPB3-202ENST00000448012 M0R2T5 61 aa5.84□□□□□ -1.47
NPIPB3-202ENST00000448012 PDE6GP18545 87 aa5.84□□□□□ -1.47
NPIPB3-202ENST00000448012 RBM3P98179 157 aaKnown RBP5.84□□□□□ -1.47
NPIPB3-202ENST00000448012 Q6Q795 121 aa5.84□□□□□ -1.47
NPIPB3-202ENST00000448012 SIGMAR1Q99720 223 aa5.84□□□□□ -1.47
NPIPB3-202ENST00000448012 CCKP06307 115 aa5.83□□□□□ -1.48
NPIPB3-202ENST00000448012 Q75L30 129 aa5.83□□□□□ -1.48
NPIPB3-202ENST00000448012 Q96NJ1 140 aa5.83□□□□□ -1.48
NPIPB3-202ENST00000448012 A0A087WSZ3 146 aa5.82□□□□□ -1.48
NPIPB3-202ENST00000448012 DSCR8Q96T75 97 aa5.82□□□□□ -1.48
NPIPB3-202ENST00000448012 Q6ZQT0 140 aa5.81□□□□□ -1.48
NPIPB3-202ENST00000448012 TRBV7-4A0A0J9YYF1 115 aa5.8□□□□□ -1.48
NPIPB3-202ENST00000448012 MT-ATP8P03928 68 aa5.8□□□□□ -1.48
NPIPB3-202ENST00000448012 MT1HP80294 61 aa5.79□□□□□ -1.48
NPIPB3-202ENST00000448012 LINC00643Q86TS7 51 aa5.79□□□□□ -1.48
NPIPB3-202ENST00000448012 SCGB1A1P11684 91 aa5.78□□□□□ -1.48
NPIPB3-202ENST00000448012 KRTAP19-2Q3LHN2 52 aa5.78□□□□□ -1.48
NPIPB3-202ENST00000448012 KRTAP9-9Q9BYP9 154 aa5.77□□□□□ -1.49
NPIPB3-202ENST00000448012 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
NPIPB3-202ENST00000448012 LINC00846Q9NV44 126 aa5.77□□□□□ -1.49
NPIPB3-202ENST00000448012 ATP5EP2Q5VTU8 51 aa5.75□□□□□ -1.49
NPIPB3-202ENST00000448012 KRTAP19-1Q8IUB9 90 aa5.75□□□□□ -1.49
NPIPB3-202ENST00000448012 UBL5Q9BZL1 73 aa5.75□□□□□ -1.49
NPIPB3-202ENST00000448012 A0A1W2PNM2 257 aa5.74□□□□□ -1.49
NPIPB3-202ENST00000448012 IGKV4-1P06312 121 aa5.74□□□□□ -1.49
NPIPB3-202ENST00000448012 C20orf166-AS1Q96NR2 134 aa5.74□□□□□ -1.49
NPIPB3-202ENST00000448012 LINC00313P59037 77 aa5.73□□□□□ -1.49
NPIPB3-202ENST00000448012 A8MUU9 505 aa5.72□□□□□ -1.49
NPIPB3-202ENST00000448012 DSCR10P59022 87 aa5.72□□□□□ -1.49
NPIPB3-202ENST00000448012 IMUPQ9GZP8 106 aa5.72□□□□□ -1.49
NPIPB3-202ENST00000448012 KRTAP4-8A0A0G2JLE6 195 aa5.71□□□□□ -1.5
NPIPB3-202ENST00000448012 A0A1B0GW54 56 aa5.71□□□□□ -1.5
NPIPB3-202ENST00000448012 PCP4P48539 62 aa5.7□□□□□ -1.5
NPIPB3-202ENST00000448012 KRTAP10-6P60371 365 aaPredicted RBP5.7□□□□□ -1.5
NPIPB3-202ENST00000448012 Q6ZVQ6 151 aa5.7□□□□□ -1.5
NPIPB3-202ENST00000448012 IGKV3D-7A0A0C4DH55 119 aa5.68□□□□□ -1.5
NPIPB3-202ENST00000448012 IGHV6-1A0A0B4J1U7 121 aa5.67□□□□□ -1.5
NPIPB3-202ENST00000448012 FAM236DA0A1B0GTK5 79 aa5.66□□□□□ -1.5
NPIPB3-202ENST00000448012 FAM236CP0DP71 79 aa5.66□□□□□ -1.5
NPIPB3-202ENST00000448012 DEFB116Q30KQ4 102 aa5.66□□□□□ -1.5
NPIPB3-202ENST00000448012 J3KT08 172 aa5.65□□□□□ -1.5
NPIPB3-202ENST00000448012 CXCL6P80162 114 aa5.65□□□□□ -1.5
NPIPB3-202ENST00000448012 CRCT1Q9UGL9 99 aa5.65□□□□□ -1.5
NPIPB3-202ENST00000448012 FAM236AA0A1B0GUQ0 79 aa5.64□□□□□ -1.51
NPIPB3-202ENST00000448012 FAM236BA0A1B0GV22 79 aa5.64□□□□□ -1.51
NPIPB3-202ENST00000448012 C8orf87E5RJ46 101 aa5.64□□□□□ -1.51
NPIPB3-202ENST00000448012 NREPQ16612 68 aa5.64□□□□□ -1.51
NPIPB3-202ENST00000448012 LINC00472Q9H8W2 130 aa5.64□□□□□ -1.51
NPIPB3-202ENST00000448012 NDUFB1O75438 58 aa5.63□□□□□ -1.51
NPIPB3-202ENST00000448012 RBM12B-AS1Q9P1G2 102 aa5.63□□□□□ -1.51
NPIPB3-202ENST00000448012 HIST1H4AP62805 103 aaKnown RBP5.62□□□□□ -1.51
NPIPB3-202ENST00000448012 A0A1B0GVX0 72 aa5.61□□□□□ -1.51
NPIPB3-202ENST00000448012 ANAPC13Q9BS18 74 aa5.61□□□□□ -1.51
NPIPB3-202ENST00000448012 BPY2O14599 106 aa5.6□□□□□ -1.51
NPIPB3-202ENST00000448012 A0A087WVE0 104 aa5.59□□□□□ -1.51
NPIPB3-202ENST00000448012 KRTAP16-1A8MUX0 517 aa5.59□□□□□ -1.51
NPIPB3-202ENST00000448012 ATOX1O00244 68 aa5.59□□□□□ -1.51
NPIPB3-202ENST00000448012 FSIP2Q5CZC0 6907 aa5.59□□□□□ -1.51
NPIPB3-202ENST00000448012 NOTCH2NLQ7Z3S9 236 aa5.58□□□□□ -1.52
NPIPB3-202ENST00000448012 KRTAP23-1A1A580 65 aa5.57□□□□□ -1.52
NPIPB3-202ENST00000448012 ZCCHC13Q8WW36 166 aaKnown RBP5.54□□□□□ -1.52
NPIPB3-202ENST00000448012 A8MWP4 228 aa5.52□□□□□ -1.53
NPIPB3-202ENST00000448012 LCE1DQ5T752 114 aa5.52□□□□□ -1.53
NPIPB3-202ENST00000448012 Q8N9L7 120 aa5.52□□□□□ -1.53
NPIPB3-202ENST00000448012 SMIM20Q8N5G0 67 aa5.51□□□□□ -1.53
NPIPB3-202ENST00000448012 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
NPIPB3-202ENST00000448012 HRES1P13985 223 aa5.5□□□□□ -1.53
NPIPB3-202ENST00000448012 SERP2Q8N6R1 65 aa5.5□□□□□ -1.53
NPIPB3-202ENST00000448012 C8orf17Q9NRJ1 99 aa5.5□□□□□ -1.53
NPIPB3-202ENST00000448012 FLGP20930 4061 aaPredicted RBP5.49□□□□□ -1.53
NPIPB3-202ENST00000448012 K7EQZ3 153 aa5.49□□□□□ -1.53
NPIPB3-202ENST00000448012 SPINK7P58062 85 aa5.49□□□□□ -1.53
NPIPB3-202ENST00000448012 UQCRQO14949 82 aa5.48□□□□□ -1.53
NPIPB3-202ENST00000448012 COX7CP15954 63 aa5.48□□□□□ -1.53
NPIPB3-202ENST00000448012 CCDC179H3BU77 68 aa5.47□□□□□ -1.53
NPIPB3-202ENST00000448012 Q8N9P0 234 aaPredicted RBP5.47□□□□□ -1.53
NPIPB3-202ENST00000448012 MPLKIPQ8TAP9 179 aa5.47□□□□□ -1.53
NPIPB3-202ENST00000448012 TRAV7A0A075B6U4 112 aa5.46□□□□□ -1.54
NPIPB3-202ENST00000448012 HCG22E2RYF7 251 aa5.46□□□□□ -1.54
NPIPB3-202ENST00000448012 PRR15Q8IV56 129 aa5.46□□□□□ -1.54
NPIPB3-202ENST00000448012 KRTAP9-8Q9BYQ0 159 aa5.45□□□□□ -1.54
NPIPB3-202ENST00000448012 NDUFS5O43920 106 aa5.44□□□□□ -1.54
NPIPB3-202ENST00000448012 WFDC13Q8IUB5 93 aa5.43□□□□□ -1.54
NPIPB3-202ENST00000448012 KRTAP10-10P60014 251 aa5.42□□□□□ -1.54
NPIPB3-202ENST00000448012 TMEM254Q8TBM7 123 aa5.42□□□□□ -1.54
NPIPB3-202ENST00000448012 MRPL34Q9BQ48 92 aaKnown RBP5.42□□□□□ -1.54
NPIPB3-202ENST00000448012 MMP24-AS1A0A0U1RRL7 71 aa5.4□□□□□ -1.54
NPIPB3-202ENST00000448012 hDV103S1A0JD37 113 aa5.4□□□□□ -1.54
NPIPB3-202ENST00000448012 MT2AP02795 61 aa5.4□□□□□ -1.54
NPIPB3-202ENST00000448012 CASC2Q6XLA1 102 aa5.4□□□□□ -1.54
NPIPB3-202ENST00000448012 OCR1Q9BZK8 76 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms