RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 RETNLBQ9BQ08 111 aa9.55□□□□□ -0.88
CNOT3-204ENST00000447684 PLA2G1BP04054 148 aaKnown RBP9.54□□□□□ -0.88
CNOT3-204ENST00000447684 KRTAP13-1Q8IUC0 172 aa9.53□□□□□ -0.88
CNOT3-204ENST00000447684 STAB2Q8WWQ8 2551 aa9.52□□□□□ -0.88
CNOT3-204ENST00000447684 C14orf177Q52M58 125 aa9.52□□□□□ -0.89
CNOT3-204ENST00000447684 H3BS24 57 aa9.51□□□□□ -0.89
CNOT3-204ENST00000447684 DNAH9Q9NYC9 4486 aa9.5□□□□□ -0.89
CNOT3-204ENST00000447684 MIR22HGQ0VDD5 57 aa9.48□□□□□ -0.89
CNOT3-204ENST00000447684 HUWE1Q7Z6Z7 4374 aaKnown RBP9.48□□□□□ -0.89
CNOT3-204ENST00000447684 WWC2-AS2Q96NR7 200 aa9.46□□□□□ -0.9
CNOT3-204ENST00000447684 RTL8CO15255 209 aa9.45□□□□□ -0.9
CNOT3-204ENST00000447684 SPATA8Q6RVD6 105 aa9.45□□□□□ -0.9
CNOT3-204ENST00000447684 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.44□□□□□ -0.9
CNOT3-204ENST00000447684 DMAC1Q96GE9 116 aa9.44□□□□□ -0.9
CNOT3-204ENST00000447684 LINC00483Q53H64 154 aa9.43□□□□□ -0.9
CNOT3-204ENST00000447684 CSAG1Q6PB30 78 aa9.43□□□□□ -0.9
CNOT3-204ENST00000447684 UQCR11O14957 56 aa9.43□□□□□ -0.9
CNOT3-204ENST00000447684 KRTAP13-3Q3SY46 172 aa9.43□□□□□ -0.9
CNOT3-204ENST00000447684 ALMS1Q8TCU4 4167 aa9.42□□□□□ -0.9
CNOT3-204ENST00000447684 CIRBP-AS1Q8TBR5 109 aa9.41□□□□□ -0.9
CNOT3-204ENST00000447684 ZNF706Q9Y5V0 76 aaPredicted RBP9.41□□□□□ -0.9
CNOT3-204ENST00000447684 KRTAP24-1Q3LI83 254 aa9.4□□□□□ -0.9
CNOT3-204ENST00000447684 FRAS1Q86XX4 4008 aa9.37□□□□□ -0.91
CNOT3-204ENST00000447684 PSORS1C2Q9UIG4 136 aa9.37□□□□□ -0.91
CNOT3-204ENST00000447684 MGAM2Q2M2H8 2515 aa9.37□□□□□ -0.91
CNOT3-204ENST00000447684 SPACA4Q8TDM5 124 aa9.34□□□□□ -0.91
CNOT3-204ENST00000447684 APLNQ9ULZ1 77 aa9.32□□□□□ -0.92
CNOT3-204ENST00000447684 DNAH7Q8WXX0 4024 aa9.31□□□□□ -0.92
CNOT3-204ENST00000447684 IGKV2D-30A0A075B6S6 120 aa9.29□□□□□ -0.92
CNOT3-204ENST00000447684 FAM229AH3BQW9 127 aa9.29□□□□□ -0.92
CNOT3-204ENST00000447684 IGKV2-30P06310 120 aa9.29□□□□□ -0.92
CNOT3-204ENST00000447684 ZNF861PO60384 105 aa9.29□□□□□ -0.92
CNOT3-204ENST00000447684 IGLV5-52A0A0A0MRZ9 124 aa9.29□□□□□ -0.92
CNOT3-204ENST00000447684 SPINK1P00995 79 aa9.28□□□□□ -0.92
CNOT3-204ENST00000447684 Q6ZRN7 208 aaPredicted RBP9.26□□□□□ -0.93
CNOT3-204ENST00000447684 NBDYA0A0U1RRE5 68 aa9.25□□□□□ -0.93
CNOT3-204ENST00000447684 DNAH8Q96JB1 4490 aa9.25□□□□□ -0.93
CNOT3-204ENST00000447684 DYNC2H1Q8NCM8 4307 aaKnown RBP9.23□□□□□ -0.93
CNOT3-204ENST00000447684 TGP01266 2768 aa9.21□□□□□ -0.94
CNOT3-204ENST00000447684 MEGF8Q7Z7M0 2845 aa9.17□□□□□ -0.94
CNOT3-204ENST00000447684 IGLV7-43P04211 117 aa9.16□□□□□ -0.94
CNOT3-204ENST00000447684 C1orf134Q5TEV5 83 aa9.16□□□□□ -0.94
CNOT3-204ENST00000447684 PLECQ15149 4684 aaKnown RBP9.16□□□□□ -0.94
CNOT3-204ENST00000447684 A0A087WTM6 91 aa9.13□□□□□ -0.95
CNOT3-204ENST00000447684 Q8N1X5 172 aa9.12□□□□□ -0.95
CNOT3-204ENST00000447684 FLG2Q5D862 2391 aaPredicted RBP9.1□□□□□ -0.95
CNOT3-204ENST00000447684 HECTD4Q9Y4D8 3996 aa9.09□□□□□ -0.95
CNOT3-204ENST00000447684 SSBP3-AS1Q7Z2R9 100 aa9.08□□□□□ -0.96
CNOT3-204ENST00000447684 DNAH17Q9UFH2 4485 aa9.05□□□□□ -0.96
CNOT3-204ENST00000447684 FBN3Q75N90 2809 aa9.04□□□□□ -0.96
CNOT3-204ENST00000447684 NUPR2A6NF83 97 aa9.03□□□□□ -0.96
CNOT3-204ENST00000447684 KRTAP16-1A8MUX0 517 aa9.03□□□□□ -0.96
CNOT3-204ENST00000447684 KRTAP25-1Q3LHN0 102 aa9.01□□□□□ -0.97
CNOT3-204ENST00000447684 CRIPTQ9P021 101 aa9.01□□□□□ -0.97
CNOT3-204ENST00000447684 H0YAA0 97 aa9□□□□□ -0.97
CNOT3-204ENST00000447684 Q6ZSA8 131 aa9□□□□□ -0.97
CNOT3-204ENST00000447684 VPS13DQ5THJ4 4388 aa8.99□□□□□ -0.97
CNOT3-204ENST00000447684 A8MUU9 505 aa8.99□□□□□ -0.97
CNOT3-204ENST00000447684 LINC00304Q8N9R0 145 aa8.98□□□□□ -0.97
CNOT3-204ENST00000447684 LY6G6CO95867 125 aa8.97□□□□□ -0.97
CNOT3-204ENST00000447684 ROMO1P60602 79 aa8.97□□□□□ -0.97
CNOT3-204ENST00000447684 KRTAP13-2Q52LG2 175 aa8.95□□□□□ -0.98
CNOT3-204ENST00000447684 TYMSOSQ8TAI1 123 aa8.95□□□□□ -0.98
CNOT3-204ENST00000447684 STARD9Q9P2P6 4700 aa8.93□□□□□ -0.98
CNOT3-204ENST00000447684 KMT2AQ03164 3969 aa8.91□□□□□ -0.98
CNOT3-204ENST00000447684 DNAH2Q9P225 4427 aa8.91□□□□□ -0.98
CNOT3-204ENST00000447684 A0A1B0GU33 70 aa8.9□□□□□ -0.98
CNOT3-204ENST00000447684 PRKDCP78527 4128 aaKnown RBP8.85□□□□□ -0.99
CNOT3-204ENST00000447684 DNAH11Q96DT5 4516 aa8.82□□□□□ -1
CNOT3-204ENST00000447684 DNAH6Q9C0G6 4158 aa8.82□□□□□ -1
CNOT3-204ENST00000447684 H1FX-AS1Q4G0G2 97 aa8.8□□□□□ -1
CNOT3-204ENST00000447684 K7ERS5 55 aa8.78□□□□□ -1
CNOT3-204ENST00000447684 DNAH5Q8TE73 4624 aa8.73□□□□□ -1.01
CNOT3-204ENST00000447684 P0C880 135 aa8.73□□□□□ -1.01
CNOT3-204ENST00000447684 KRTAP10-2P60368 255 aa8.73□□□□□ -1.01
CNOT3-204ENST00000447684 DMBT1Q9UGM3 2413 aaPredicted RBP8.71□□□□□ -1.01
CNOT3-204ENST00000447684 KRTAP1-4P0C5Y4 121 aa8.7□□□□□ -1.02
CNOT3-204ENST00000447684 LRP1BQ9NZR2 4599 aa8.7□□□□□ -1.02
CNOT3-204ENST00000447684 C9orf92A6NGG3 77 aa8.69□□□□□ -1.02
CNOT3-204ENST00000447684 KRTAP3-1Q9BYR8 98 aa8.67□□□□□ -1.02
CNOT3-204ENST00000447684 SPINT4Q6UDR6 99 aa8.66□□□□□ -1.02
CNOT3-204ENST00000447684 COX6B2Q6YFQ2 88 aa8.64□□□□□ -1.03
CNOT3-204ENST00000447684 KRTAP21-3Q3LHN1 58 aa8.63□□□□□ -1.03
CNOT3-204ENST00000447684 KRTAP10-1P60331 282 aa8.6□□□□□ -1.03
CNOT3-204ENST00000447684 VPS13BQ7Z7G8 4022 aa8.59□□□□□ -1.03
CNOT3-204ENST00000447684 A0A0D9SG42 100 aa8.59□□□□□ -1.03
CNOT3-204ENST00000447684 C10orf95Q9H7T3 257 aa8.5□□□□□ -1.05
CNOT3-204ENST00000447684 RPL37P61927 97 aaKnown RBP8.5□□□□□ -1.05
CNOT3-204ENST00000447684 TPRXLQ17RH7 258 aa8.5□□□□□ -1.05
CNOT3-204ENST00000447684 RPS29P62273 56 aaKnown RBP8.49□□□□□ -1.05
CNOT3-204ENST00000447684 PKD1P98161 4303 aa8.49□□□□□ -1.05
CNOT3-204ENST00000447684 NDUFAF8A1L188 74 aa8.47□□□□□ -1.05
CNOT3-204ENST00000447684 C20orf166-AS1Q96NR2 134 aa8.45□□□□□ -1.06
CNOT3-204ENST00000447684 FAT2Q9NYQ8 4349 aa8.43□□□□□ -1.06
CNOT3-204ENST00000447684 KRTAP13-4Q3LI77 160 aa8.41□□□□□ -1.06
CNOT3-204ENST00000447684 SACSQ9NZJ4 4579 aa8.38□□□□□ -1.07
CNOT3-204ENST00000447684 KRTAP10-6P60371 365 aaPredicted RBP8.35□□□□□ -1.07
CNOT3-204ENST00000447684 SMR3BP02814 79 aaPredicted RBP8.32□□□□□ -1.08
CNOT3-204ENST00000447684 HYDINQ4G0P3 5121 aa8.31□□□□□ -1.08
CNOT3-204ENST00000447684 KRTAP15-1Q3LI76 137 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms