RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 LY6G6CO95867 125 aa4.98□□□□□ -1.61
MCF2L2-203ENST00000447025 H3BUX3 64 aa4.97□□□□□ -1.61
MCF2L2-203ENST00000447025 IGFL1Q6UW32 110 aa4.97□□□□□ -1.61
MCF2L2-203ENST00000447025 H0YAA0 97 aa4.96□□□□□ -1.62
MCF2L2-203ENST00000447025 C10orf99Q6UWK7 81 aa4.96□□□□□ -1.62
MCF2L2-203ENST00000447025 ANAPC11Q9NYG5 84 aa4.96□□□□□ -1.62
MCF2L2-203ENST00000447025 NOTCH1P46531 2555 aa4.96□□□□□ -1.62
MCF2L2-203ENST00000447025 H3BUA1 57 aa4.96□□□□□ -1.62
MCF2L2-203ENST00000447025 TPRXLQ17RH7 258 aa4.96□□□□□ -1.62
MCF2L2-203ENST00000447025 Q6ZRX8 168 aa4.96□□□□□ -1.62
MCF2L2-203ENST00000447025 DEFB131AP59861 70 aa4.95□□□□□ -1.62
MCF2L2-203ENST00000447025 ANK2Q01484 3957 aa4.93□□□□□ -1.62
MCF2L2-203ENST00000447025 NBEAL1Q6ZS30 2694 aa4.93□□□□□ -1.62
MCF2L2-203ENST00000447025 MGAM2Q2M2H8 2515 aa4.92□□□□□ -1.62
MCF2L2-203ENST00000447025 NBEAL2Q6ZNJ1 2754 aa4.92□□□□□ -1.62
MCF2L2-203ENST00000447025 A0A0G2JQZ4 141 aa4.91□□□□□ -1.62
MCF2L2-203ENST00000447025 Q6ZSA8 131 aa4.9□□□□□ -1.63
MCF2L2-203ENST00000447025 SPRR1AP35321 89 aa4.87□□□□□ -1.63
MCF2L2-203ENST00000447025 KRTAP13-3Q3SY46 172 aa4.87□□□□□ -1.63
MCF2L2-203ENST00000447025 KRTAP17-1Q9BYP8 105 aa4.87□□□□□ -1.63
MCF2L2-203ENST00000447025 FLG2Q5D862 2391 aaPredicted RBP4.86□□□□□ -1.63
MCF2L2-203ENST00000447025 MRPL34Q9BQ48 92 aaKnown RBP4.86□□□□□ -1.63
MCF2L2-203ENST00000447025 LCE2BO14633 110 aa4.86□□□□□ -1.63
MCF2L2-203ENST00000447025 DEFB136Q30KP8 78 aa4.86□□□□□ -1.63
MCF2L2-203ENST00000447025 C4orf3Q8WVX3 66 aa4.85□□□□□ -1.63
MCF2L2-203ENST00000447025 C16orf74Q96GX8 76 aa4.85□□□□□ -1.63
MCF2L2-203ENST00000447025 CMYA5Q8N3K9 4069 aa4.85□□□□□ -1.63
MCF2L2-203ENST00000447025 GIG44P09565 113 aaPredicted RBP4.83□□□□□ -1.64
MCF2L2-203ENST00000447025 KRTAP10-3P60369 221 aa4.82□□□□□ -1.64
MCF2L2-203ENST00000447025 KRTAP24-1Q3LI83 254 aa4.82□□□□□ -1.64
MCF2L2-203ENST00000447025 PRO2289Q9P1D8 64 aa4.82□□□□□ -1.64
MCF2L2-203ENST00000447025 Q8N1X5 172 aa4.81□□□□□ -1.64
MCF2L2-203ENST00000447025 NOP10Q9NPE3 64 aaKnown RBP4.8□□□□□ -1.64
MCF2L2-203ENST00000447025 LCE2CQ5TA81 110 aa4.8□□□□□ -1.64
MCF2L2-203ENST00000447025 K7EIL1 84 aa4.79□□□□□ -1.64
MCF2L2-203ENST00000447025 TENM3Q9P273 2699 aa4.77□□□□□ -1.65
MCF2L2-203ENST00000447025 LCE2AQ5TA79 106 aaPredicted RBP4.76□□□□□ -1.65
MCF2L2-203ENST00000447025 H1FX-AS1Q4G0G2 97 aa4.75□□□□□ -1.65
MCF2L2-203ENST00000447025 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
MCF2L2-203ENST00000447025 DEFB130BP0DP73 79 aa4.74□□□□□ -1.65
MCF2L2-203ENST00000447025 DEFB130AP0DP74 79 aa4.74□□□□□ -1.65
MCF2L2-203ENST00000447025 BIRC6Q9NR09 4857 aa4.73□□□□□ -1.65
MCF2L2-203ENST00000447025 TENM2Q9NT68 2774 aa4.73□□□□□ -1.65
MCF2L2-203ENST00000447025 COL7A1Q02388 2944 aa4.72□□□□□ -1.65
MCF2L2-203ENST00000447025 STAB2Q8WWQ8 2551 aa4.72□□□□□ -1.65
MCF2L2-203ENST00000447025 LELP1Q5T871 98 aa4.72□□□□□ -1.65
MCF2L2-203ENST00000447025 PRKDCP78527 4128 aaKnown RBP4.71□□□□□ -1.66
MCF2L2-203ENST00000447025 TGP01266 2768 aa4.7□□□□□ -1.66
MCF2L2-203ENST00000447025 CSMD3Q7Z407 3707 aa4.7□□□□□ -1.66
MCF2L2-203ENST00000447025 MEGF8Q7Z7M0 2845 aa4.7□□□□□ -1.66
MCF2L2-203ENST00000447025 SPACA4Q8TDM5 124 aa4.7□□□□□ -1.66
MCF2L2-203ENST00000447025 DNAH3Q8TD57 4116 aa4.69□□□□□ -1.66
MCF2L2-203ENST00000447025 IGKV2-30P06310 120 aa4.69□□□□□ -1.66
MCF2L2-203ENST00000447025 SPRR1BP22528 89 aa4.69□□□□□ -1.66
MCF2L2-203ENST00000447025 C14orf177Q52M58 125 aa4.69□□□□□ -1.66
MCF2L2-203ENST00000447025 R4GN34 69 aa4.68□□□□□ -1.66
MCF2L2-203ENST00000447025 PLAC4Q8WY50 150 aa4.68□□□□□ -1.66
MCF2L2-203ENST00000447025 COX6B2Q6YFQ2 88 aa4.67□□□□□ -1.66
MCF2L2-203ENST00000447025 IGKV2D-30A0A075B6S6 120 aa4.66□□□□□ -1.66
MCF2L2-203ENST00000447025 LYSTQ99698 3801 aa4.66□□□□□ -1.66
MCF2L2-203ENST00000447025 PRO0255Q9UI72 69 aa4.65□□□□□ -1.66
MCF2L2-203ENST00000447025 LORP23490 312 aaPredicted RBP4.64□□□□□ -1.67
MCF2L2-203ENST00000447025 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
MCF2L2-203ENST00000447025 HUWE1Q7Z6Z7 4374 aaKnown RBP4.62□□□□□ -1.67
MCF2L2-203ENST00000447025 A0A096LPF7 62 aa4.62□□□□□ -1.67
MCF2L2-203ENST00000447025 KRTAP10-11P60412 298 aa4.61□□□□□ -1.67
MCF2L2-203ENST00000447025 PRLHP81277 87 aa4.61□□□□□ -1.67
MCF2L2-203ENST00000447025 TYMSOSQ8TAI1 123 aa4.61□□□□□ -1.67
MCF2L2-203ENST00000447025 DNAH9Q9NYC9 4486 aa4.6□□□□□ -1.67
MCF2L2-203ENST00000447025 SPINK1P00995 79 aa4.58□□□□□ -1.68
MCF2L2-203ENST00000447025 KRTAP7-1Q8IUC3 87 aa4.57□□□□□ -1.68
MCF2L2-203ENST00000447025 DEFB4AO15263 64 aa4.56□□□□□ -1.68
MCF2L2-203ENST00000447025 Q6ZRN7 208 aaPredicted RBP4.55□□□□□ -1.68
MCF2L2-203ENST00000447025 DNAH7Q8WXX0 4024 aa4.54□□□□□ -1.68
MCF2L2-203ENST00000447025 DEFB135Q30KP9 77 aa4.54□□□□□ -1.68
MCF2L2-203ENST00000447025 RYR3Q15413 4870 aa4.54□□□□□ -1.68
MCF2L2-203ENST00000447025 XP32Q5T750 250 aa4.52□□□□□ -1.69
MCF2L2-203ENST00000447025 STARD9Q9P2P6 4700 aa4.51□□□□□ -1.69
MCF2L2-203ENST00000447025 INE1O15225 51 aa4.5□□□□□ -1.69
MCF2L2-203ENST00000447025 KRTAP10-8P60410 259 aa4.5□□□□□ -1.69
MCF2L2-203ENST00000447025 PLECQ15149 4684 aaKnown RBP4.5□□□□□ -1.69
MCF2L2-203ENST00000447025 KMT2CQ8NEZ4 4911 aaKnown RBP4.49□□□□□ -1.69
MCF2L2-203ENST00000447025 A0A096LNI7 61 aa4.47□□□□□ -1.69
MCF2L2-203ENST00000447025 KMT2AQ03164 3969 aa4.47□□□□□ -1.69
MCF2L2-203ENST00000447025 DNAH10Q8IVF4 4471 aa4.45□□□□□ -1.7
MCF2L2-203ENST00000447025 HERC2O95714 4834 aa4.44□□□□□ -1.7
MCF2L2-203ENST00000447025 UBE2DNLQ8IWF7 75 aa4.43□□□□□ -1.7
MCF2L2-203ENST00000447025 DNAH1Q9P2D7 4330 aa4.43□□□□□ -1.7
MCF2L2-203ENST00000447025 DYNC2H1Q8NCM8 4307 aaKnown RBP4.42□□□□□ -1.7
MCF2L2-203ENST00000447025 HTN3P15516 51 aa4.42□□□□□ -1.7
MCF2L2-203ENST00000447025 PCLOQ9Y6V0 5065 aa4.41□□□□□ -1.7
MCF2L2-203ENST00000447025 KRTAP3-1Q9BYR8 98 aa4.41□□□□□ -1.7
MCF2L2-203ENST00000447025 SRRM2Q9UQ35 2752 aaKnown RBP4.39□□□□□ -1.71
MCF2L2-203ENST00000447025 S4R3F8 94 aa4.39□□□□□ -1.71
MCF2L2-203ENST00000447025 EPPK1P58107 5090 aaKnown RBP4.38□□□□□ -1.71
MCF2L2-203ENST00000447025 HYDINQ4G0P3 5121 aa4.38□□□□□ -1.71
MCF2L2-203ENST00000447025 FRAS1Q86XX4 4008 aa4.38□□□□□ -1.71
MCF2L2-203ENST00000447025 VPS13DQ5THJ4 4388 aa4.37□□□□□ -1.71
MCF2L2-203ENST00000447025 RYR2Q92736 4967 aa4.36□□□□□ -1.71
MCF2L2-203ENST00000447025 SPART-AS1P0CW21 52 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms