RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 MRPL34Q9BQ48 92 aaKnown RBP4.55□□□□□ -1.68
HDAC9-214ENST00000441542 TP53AIP1Q9HCN2 124 aa4.55□□□□□ -1.68
HDAC9-214ENST00000441542 PLAC8Q9NZF1 115 aa4.55□□□□□ -1.68
HDAC9-214ENST00000441542 SPINK1P00995 79 aa4.54□□□□□ -1.68
HDAC9-214ENST00000441542 TENM2Q9NT68 2774 aa4.54□□□□□ -1.68
HDAC9-214ENST00000441542 A0A1B0GVX0 72 aa4.53□□□□□ -1.68
HDAC9-214ENST00000441542 UBE2DNLQ8IWF7 75 aa4.53□□□□□ -1.68
HDAC9-214ENST00000441542 MEGF8Q7Z7M0 2845 aa4.53□□□□□ -1.68
HDAC9-214ENST00000441542 KRTAP1-5Q9BYS1 174 aa4.53□□□□□ -1.68
HDAC9-214ENST00000441542 PANO1I0J062 215 aa4.52□□□□□ -1.69
HDAC9-214ENST00000441542 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
HDAC9-214ENST00000441542 C1orf134Q5TEV5 83 aa4.51□□□□□ -1.69
HDAC9-214ENST00000441542 STAB2Q8WWQ8 2551 aa4.51□□□□□ -1.69
HDAC9-214ENST00000441542 ACYP2P14621 99 aa4.51□□□□□ -1.69
HDAC9-214ENST00000441542 ROMO1P60602 79 aa4.51□□□□□ -1.69
HDAC9-214ENST00000441542 Q96NJ1 140 aa4.51□□□□□ -1.69
HDAC9-214ENST00000441542 Q6ZR54 194 aa4.5□□□□□ -1.69
HDAC9-214ENST00000441542 RTL8CO15255 209 aa4.5□□□□□ -1.69
HDAC9-214ENST00000441542 CIRBP-AS1Q8TBR5 109 aa4.5□□□□□ -1.69
HDAC9-214ENST00000441542 CRIPTQ9P021 101 aa4.48□□□□□ -1.69
HDAC9-214ENST00000441542 DNAH10Q8IVF4 4471 aa4.48□□□□□ -1.69
HDAC9-214ENST00000441542 IGKV2D-30A0A075B6S6 120 aa4.48□□□□□ -1.69
HDAC9-214ENST00000441542 IGKV2-30P06310 120 aa4.48□□□□□ -1.69
HDAC9-214ENST00000441542 UQCR11O14957 56 aa4.46□□□□□ -1.69
HDAC9-214ENST00000441542 SPRR1BP22528 89 aa4.46□□□□□ -1.7
HDAC9-214ENST00000441542 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.44□□□□□ -1.7
HDAC9-214ENST00000441542 SPATA8Q6RVD6 105 aa4.42□□□□□ -1.7
HDAC9-214ENST00000441542 DMBT1Q9UGM3 2413 aaPredicted RBP4.42□□□□□ -1.7
HDAC9-214ENST00000441542 FAM229AH3BQW9 127 aa4.42□□□□□ -1.7
HDAC9-214ENST00000441542 Q8N1X5 172 aa4.4□□□□□ -1.71
HDAC9-214ENST00000441542 LYSTQ99698 3801 aa4.4□□□□□ -1.71
HDAC9-214ENST00000441542 WWC2-AS2Q96NR7 200 aa4.4□□□□□ -1.71
HDAC9-214ENST00000441542 C14orf177Q52M58 125 aa4.39□□□□□ -1.71
HDAC9-214ENST00000441542 DMAC1Q96GE9 116 aa4.39□□□□□ -1.71
HDAC9-214ENST00000441542 PSORS1C2Q9UIG4 136 aa4.39□□□□□ -1.71
HDAC9-214ENST00000441542 PRKDCP78527 4128 aaKnown RBP4.39□□□□□ -1.71
HDAC9-214ENST00000441542 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
HDAC9-214ENST00000441542 KRTAP13-1Q8IUC0 172 aa4.36□□□□□ -1.71
HDAC9-214ENST00000441542 CMYA5Q8N3K9 4069 aa4.36□□□□□ -1.71
HDAC9-214ENST00000441542 DYNC2H1Q8NCM8 4307 aaKnown RBP4.36□□□□□ -1.71
HDAC9-214ENST00000441542 ZNF861PO60384 105 aa4.36□□□□□ -1.71
HDAC9-214ENST00000441542 P0C880 135 aa4.34□□□□□ -1.71
HDAC9-214ENST00000441542 KRTAP13-3Q3SY46 172 aa4.34□□□□□ -1.71
HDAC9-214ENST00000441542 K7ERS5 55 aa4.33□□□□□ -1.72
HDAC9-214ENST00000441542 SPACA4Q8TDM5 124 aa4.33□□□□□ -1.72
HDAC9-214ENST00000441542 SSBP3-AS1Q7Z2R9 100 aa4.32□□□□□ -1.72
HDAC9-214ENST00000441542 IGLV5-52A0A0A0MRZ9 124 aa4.3□□□□□ -1.72
HDAC9-214ENST00000441542 LINC00483Q53H64 154 aa4.3□□□□□ -1.72
HDAC9-214ENST00000441542 IGLV7-43P04211 117 aa4.29□□□□□ -1.72
HDAC9-214ENST00000441542 DNAH9Q9NYC9 4486 aa4.29□□□□□ -1.72
HDAC9-214ENST00000441542 NBDYA0A0U1RRE5 68 aa4.29□□□□□ -1.72
HDAC9-214ENST00000441542 C20orf166-AS1Q96NR2 134 aa4.29□□□□□ -1.72
HDAC9-214ENST00000441542 DNAH1Q9P2D7 4330 aa4.28□□□□□ -1.72
HDAC9-214ENST00000441542 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
HDAC9-214ENST00000441542 FRAS1Q86XX4 4008 aa4.27□□□□□ -1.73
HDAC9-214ENST00000441542 APLNQ9ULZ1 77 aa4.27□□□□□ -1.73
HDAC9-214ENST00000441542 LINC00304Q8N9R0 145 aa4.27□□□□□ -1.73
HDAC9-214ENST00000441542 TYMSOSQ8TAI1 123 aa4.27□□□□□ -1.73
HDAC9-214ENST00000441542 H0YAA0 97 aa4.26□□□□□ -1.73
HDAC9-214ENST00000441542 A8MUU9 505 aa4.25□□□□□ -1.73
HDAC9-214ENST00000441542 DNAH6Q9C0G6 4158 aa4.25□□□□□ -1.73
HDAC9-214ENST00000441542 Q6ZSA8 131 aa4.25□□□□□ -1.73
HDAC9-214ENST00000441542 A0A087WTM6 91 aa4.24□□□□□ -1.73
HDAC9-214ENST00000441542 ALMS1Q8TCU4 4167 aa4.24□□□□□ -1.73
HDAC9-214ENST00000441542 HUWE1Q7Z6Z7 4374 aaKnown RBP4.24□□□□□ -1.73
HDAC9-214ENST00000441542 SPINT4Q6UDR6 99 aa4.24□□□□□ -1.73
HDAC9-214ENST00000441542 A0A1B0GU33 70 aa4.22□□□□□ -1.73
HDAC9-214ENST00000441542 DNAH8Q96JB1 4490 aa4.22□□□□□ -1.73
HDAC9-214ENST00000441542 Q6ZRN7 208 aaPredicted RBP4.21□□□□□ -1.74
HDAC9-214ENST00000441542 A0A0D9SG42 100 aa4.2□□□□□ -1.74
HDAC9-214ENST00000441542 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
HDAC9-214ENST00000441542 LY6G6CO95867 125 aa4.2□□□□□ -1.74
HDAC9-214ENST00000441542 KRTAP3-3Q9BYR6 98 aa4.2□□□□□ -1.74
HDAC9-214ENST00000441542 KRTAP3-2Q9BYR7 98 aa4.2□□□□□ -1.74
HDAC9-214ENST00000441542 KMT2CQ8NEZ4 4911 aaKnown RBP4.2□□□□□ -1.74
HDAC9-214ENST00000441542 C9orf92A6NGG3 77 aa4.18□□□□□ -1.74
HDAC9-214ENST00000441542 DNAH7Q8WXX0 4024 aa4.18□□□□□ -1.74
HDAC9-214ENST00000441542 KRTAP13-2Q52LG2 175 aa4.17□□□□□ -1.74
HDAC9-214ENST00000441542 DNAH17Q9UFH2 4485 aa4.17□□□□□ -1.74
HDAC9-214ENST00000441542 CAMK2N1Q7Z7J9 78 aa4.16□□□□□ -1.74
HDAC9-214ENST00000441542 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
HDAC9-214ENST00000441542 H1FX-AS1Q4G0G2 97 aa4.15□□□□□ -1.74
HDAC9-214ENST00000441542 PLECQ15149 4684 aaKnown RBP4.14□□□□□ -1.75
HDAC9-214ENST00000441542 NUPR2A6NF83 97 aa4.13□□□□□ -1.75
HDAC9-214ENST00000441542 STARD9Q9P2P6 4700 aa4.12□□□□□ -1.75
HDAC9-214ENST00000441542 KRTAP10-2P60368 255 aa4.1□□□□□ -1.75
HDAC9-214ENST00000441542 COX6B2Q6YFQ2 88 aa4.09□□□□□ -1.76
HDAC9-214ENST00000441542 RYR3Q15413 4870 aa4.08□□□□□ -1.76
HDAC9-214ENST00000441542 KMT2AQ03164 3969 aa4.08□□□□□ -1.76
HDAC9-214ENST00000441542 BIRC6Q9NR09 4857 aa4.07□□□□□ -1.76
HDAC9-214ENST00000441542 TPRXLQ17RH7 258 aa4.06□□□□□ -1.76
HDAC9-214ENST00000441542 HYDINQ4G0P3 5121 aa4.06□□□□□ -1.76
HDAC9-214ENST00000441542 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
HDAC9-214ENST00000441542 LCE2DQ5TA82 110 aaPredicted RBP4.06□□□□□ -1.76
HDAC9-214ENST00000441542 KRTAP3-1Q9BYR8 98 aa4.06□□□□□ -1.76
HDAC9-214ENST00000441542 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
HDAC9-214ENST00000441542 FAT2Q9NYQ8 4349 aa4.04□□□□□ -1.76
HDAC9-214ENST00000441542 DNAH11Q96DT5 4516 aa4.03□□□□□ -1.76
HDAC9-214ENST00000441542 KRTAP10-1P60331 282 aa4.02□□□□□ -1.77
HDAC9-214ENST00000441542 RPL37P61927 97 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms