RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SNURFQ9Y675 71 aa2.03□□□□□ -2.08
HMGB3P11-201ENST00000440127 STAB1Q9NY15 2570 aa2.03□□□□□ -2.09
HMGB3P11-201ENST00000440127 FAM236DA0A1B0GTK5 79 aa2.02□□□□□ -2.09
HMGB3P11-201ENST00000440127 HCG22E2RYF7 251 aa2.02□□□□□ -2.09
HMGB3P11-201ENST00000440127 H7BZZ5 65 aa2.02□□□□□ -2.09
HMGB3P11-201ENST00000440127 K7EQZ3 153 aa2.02□□□□□ -2.09
HMGB3P11-201ENST00000440127 LY6G6CO95867 125 aa2.02□□□□□ -2.09
HMGB3P11-201ENST00000440127 FAM236CP0DP71 79 aa2.02□□□□□ -2.09
HMGB3P11-201ENST00000440127 KRTAP10-1P60331 282 aa2.02□□□□□ -2.09
HMGB3P11-201ENST00000440127 RPL37AP61513 92 aaKnown RBP2.02□□□□□ -2.09
HMGB3P11-201ENST00000440127 CD164Q04900 197 aa2.02□□□□□ -2.09
HMGB3P11-201ENST00000440127 TMEM254Q8TBM7 123 aa2.02□□□□□ -2.09
HMGB3P11-201ENST00000440127 PLAC8Q9NZF1 115 aa2.02□□□□□ -2.09
HMGB3P11-201ENST00000440127 DNAH3Q8TD57 4116 aa2.02□□□□□ -2.09
HMGB3P11-201ENST00000440127 TRRAPQ9Y4A5 3859 aa2.02□□□□□ -2.09
HMGB3P11-201ENST00000440127 IGHV6-1A0A0B4J1U7 121 aa2.01□□□□□ -2.09
HMGB3P11-201ENST00000440127 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
HMGB3P11-201ENST00000440127 ATP5EP56381 51 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P11-201ENST00000440127 DEFB116Q30KQ4 102 aa2.01□□□□□ -2.09
HMGB3P11-201ENST00000440127 LINC00483Q53H64 154 aa2.01□□□□□ -2.09
HMGB3P11-201ENST00000440127 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
HMGB3P11-201ENST00000440127 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
HMGB3P11-201ENST00000440127 LINC00472Q9H8W2 130 aa2.01□□□□□ -2.09
HMGB3P11-201ENST00000440127 PSORS1C2Q9UIG4 136 aa2.01□□□□□ -2.09
HMGB3P11-201ENST00000440127 FLNBO75369 2602 aaKnown RBP2.01□□□□□ -2.09
HMGB3P11-201ENST00000440127 LCE6AA0A183 80 aa2□□□□□ -2.09
HMGB3P11-201ENST00000440127 A8MWP4 228 aa2□□□□□ -2.09
HMGB3P11-201ENST00000440127 NDUFS5O43920 106 aa2□□□□□ -2.09
HMGB3P11-201ENST00000440127 WFDC13Q8IUB5 93 aa2□□□□□ -2.09
HMGB3P11-201ENST00000440127 PRR15Q8IV56 129 aa2□□□□□ -2.09
HMGB3P11-201ENST00000440127 SERP1Q9Y6X1 66 aa2□□□□□ -2.09
HMGB3P11-201ENST00000440127 COL6A5A8TX70 2615 aa1.99□□□□□ -2.09
HMGB3P11-201ENST00000440127 NDUFB1O75438 58 aa1.99□□□□□ -2.09
HMGB3P11-201ENST00000440127 IGLV7-43P04211 117 aa1.99□□□□□ -2.09
HMGB3P11-201ENST00000440127 MP68P56378 58 aa1.99□□□□□ -2.09
HMGB3P11-201ENST00000440127 KRTAP21-3Q3LHN1 58 aa1.99□□□□□ -2.09
HMGB3P11-201ENST00000440127 CASC2Q6XLA1 102 aa1.99□□□□□ -2.09
HMGB3P11-201ENST00000440127 C8orf17Q9NRJ1 99 aa1.99□□□□□ -2.09
HMGB3P11-201ENST00000440127 PKD1L1Q8TDX9 2849 aa1.99□□□□□ -2.09
HMGB3P11-201ENST00000440127 CMYA5Q8N3K9 4069 aa1.98□□□□□ -2.09
HMGB3P11-201ENST00000440127 MOBPQ13875 183 aa1.98□□□□□ -2.09
HMGB3P11-201ENST00000440127 HRCT1Q6UXD1 115 aa1.98□□□□□ -2.09
HMGB3P11-201ENST00000440127 ZCCHC13Q8WW36 166 aaKnown RBP1.98□□□□□ -2.09
HMGB3P11-201ENST00000440127 NOTCH1P46531 2555 aa1.97□□□□□ -2.09
HMGB3P11-201ENST00000440127 MMP24-AS1A0A0U1RRL7 71 aa1.97□□□□□ -2.09
HMGB3P11-201ENST00000440127 H3BPC8 53 aa1.97□□□□□ -2.09
HMGB3P11-201ENST00000440127 SSBP3-AS1Q7Z2R9 100 aa1.97□□□□□ -2.09
HMGB3P11-201ENST00000440127 CIRBP-AS1Q8TBR5 109 aa1.97□□□□□ -2.09
HMGB3P11-201ENST00000440127 Q96NJ1 140 aa1.97□□□□□ -2.09
HMGB3P11-201ENST00000440127 PRO0628Q9UI54 55 aa1.97□□□□□ -2.09
HMGB3P11-201ENST00000440127 hDV103S1A0JD37 113 aa1.96□□□□□ -2.1
HMGB3P11-201ENST00000440127 H0Y9P7 68 aa1.96□□□□□ -2.1
HMGB3P11-201ENST00000440127 ASB16-AS1Q495Z4 193 aa1.96□□□□□ -2.1
HMGB3P11-201ENST00000440127 Q5W150 140 aa1.96□□□□□ -2.1
HMGB3P11-201ENST00000440127 LINC00208Q96KT6 92 aa1.96□□□□□ -2.1
HMGB3P11-201ENST00000440127 TP53AIP1Q9HCN2 124 aa1.96□□□□□ -2.1
HMGB3P11-201ENST00000440127 HUWE1Q7Z6Z7 4374 aaKnown RBP1.96□□□□□ -2.1
HMGB3P11-201ENST00000440127 MGAM2Q2M2H8 2515 aa1.95□□□□□ -2.1
HMGB3P11-201ENST00000440127 TRAV22A0A0B4J277 110 aa1.95□□□□□ -2.1
HMGB3P11-201ENST00000440127 FAM229BQ4G0N7 80 aa1.95□□□□□ -2.1
HMGB3P11-201ENST00000440127 Q5XG85 94 aa1.95□□□□□ -2.1
HMGB3P11-201ENST00000440127 Q6ZSA8 131 aa1.95□□□□□ -2.1
HMGB3P11-201ENST00000440127 RBM12B-AS1Q9P1G2 102 aa1.95□□□□□ -2.1
HMGB3P11-201ENST00000440127 NBEAL1Q6ZS30 2694 aa1.94□□□□□ -2.1
HMGB3P11-201ENST00000440127 ANK2Q01484 3957 aa1.94□□□□□ -2.1
HMGB3P11-201ENST00000440127 C4orf26Q17RF5 130 aa1.94□□□□□ -2.1
HMGB3P11-201ENST00000440127 SPINK6Q6UWN8 80 aa1.94□□□□□ -2.1
HMGB3P11-201ENST00000440127 C1orf64Q8NEQ6 169 aa1.94□□□□□ -2.1
HMGB3P11-201ENST00000440127 MRPL34Q9BQ48 92 aaKnown RBP1.94□□□□□ -2.1
HMGB3P11-201ENST00000440127 CYP4F30PQ9H0H9 118 aa1.94□□□□□ -2.1
HMGB3P11-201ENST00000440127 C8orf87E5RJ46 101 aa1.93□□□□□ -2.1
HMGB3P11-201ENST00000440127 FP248Q71RG6 208 aaPredicted RBP1.93□□□□□ -2.1
HMGB3P11-201ENST00000440127 SPANXA2-OT1Q8N9U9 137 aa1.93□□□□□ -2.1
HMGB3P11-201ENST00000440127 DYNC2H1Q8NCM8 4307 aaKnown RBP1.93□□□□□ -2.1
HMGB3P11-201ENST00000440127 DNAH1Q9P2D7 4330 aa1.93□□□□□ -2.1
HMGB3P11-201ENST00000440127 STAB2Q8WWQ8 2551 aa1.93□□□□□ -2.1
HMGB3P11-201ENST00000440127 KRTAP13-2Q52LG2 175 aa1.92□□□□□ -2.1
HMGB3P11-201ENST00000440127 LINC00313P59037 77 aa1.91□□□□□ -2.1
HMGB3P11-201ENST00000440127 C1orf195Q5TG92 126 aa1.91□□□□□ -2.1
HMGB3P11-201ENST00000440127 PP632Q6XCG6 107 aa1.91□□□□□ -2.1
HMGB3P11-201ENST00000440127 LIMD2Q9BT23 127 aa1.91□□□□□ -2.1
HMGB3P11-201ENST00000440127 DNAH9Q9NYC9 4486 aa1.91□□□□□ -2.1
HMGB3P11-201ENST00000440127 COL7A1Q02388 2944 aa1.9□□□□□ -2.11
HMGB3P11-201ENST00000440127 LOC101927531A0A1B0GV80 90 aa1.9□□□□□ -2.11
HMGB3P11-201ENST00000440127 Q1T7F1 81 aa1.9□□□□□ -2.11
HMGB3P11-201ENST00000440127 LUZP6Q538Z0 58 aa1.9□□□□□ -2.11
HMGB3P11-201ENST00000440127 PCOTHQ58A44 107 aa1.9□□□□□ -2.11
HMGB3P11-201ENST00000440127 SPINK1P00995 79 aa1.89□□□□□ -2.11
HMGB3P11-201ENST00000440127 MEGF8Q7Z7M0 2845 aa1.88□□□□□ -2.11
HMGB3P11-201ENST00000440127 SMR3BP02814 79 aaPredicted RBP1.88□□□□□ -2.11
HMGB3P11-201ENST00000440127 RPS29P62273 56 aaKnown RBP1.88□□□□□ -2.11
HMGB3P11-201ENST00000440127 SPAG11AQ6PDA7 123 aa1.88□□□□□ -2.11
HMGB3P11-201ENST00000440127 COA5Q86WW8 74 aa1.88□□□□□ -2.11
HMGB3P11-201ENST00000440127 LINC00304Q8N9R0 145 aa1.88□□□□□ -2.11
HMGB3P11-201ENST00000440127 CSMD3Q7Z407 3707 aa1.88□□□□□ -2.11
HMGB3P11-201ENST00000440127 RETNLBQ9BQ08 111 aa1.87□□□□□ -2.11
HMGB3P11-201ENST00000440127 DNAH7Q8WXX0 4024 aa1.87□□□□□ -2.11
HMGB3P11-201ENST00000440127 HRES1P13985 223 aa1.86□□□□□ -2.11
HMGB3P11-201ENST00000440127 ACYP2P14621 99 aa1.86□□□□□ -2.11
HMGB3P11-201ENST00000440127 VPS13DQ5THJ4 4388 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms