RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 LOC101927531A0A1B0GV80 90 aa5.3□□□□□ -1.56
HPS4-206ENST00000439453 RBM12B-AS1Q9P1G2 102 aa5.3□□□□□ -1.56
HPS4-206ENST00000439453 LINC00472Q9H8W2 130 aa5.29□□□□□ -1.56
HPS4-206ENST00000439453 IGLV7-46A0A075B6I9 117 aa5.29□□□□□ -1.56
HPS4-206ENST00000439453 LRP1BQ9NZR2 4599 aa5.29□□□□□ -1.56
HPS4-206ENST00000439453 RTL8CO15255 209 aa5.28□□□□□ -1.56
HPS4-206ENST00000439453 APOBP04114 4563 aaKnown RBP5.27□□□□□ -1.57
HPS4-206ENST00000439453 DNAH8Q96JB1 4490 aa5.27□□□□□ -1.57
HPS4-206ENST00000439453 MMP24-AS1A0A0U1RRL7 71 aa5.27□□□□□ -1.57
HPS4-206ENST00000439453 A6NN06 94 aa5.27□□□□□ -1.57
HPS4-206ENST00000439453 SPINK6Q6UWN8 80 aa5.26□□□□□ -1.57
HPS4-206ENST00000439453 IGLV9-49A0A0B4J1Y8 123 aa5.26□□□□□ -1.57
HPS4-206ENST00000439453 CDC42SE1Q9NRR8 79 aa5.26□□□□□ -1.57
HPS4-206ENST00000439453 IGHV6-1A0A0B4J1U7 121 aa5.26□□□□□ -1.57
HPS4-206ENST00000439453 C7orf65Q6ZTY9 151 aa5.26□□□□□ -1.57
HPS4-206ENST00000439453 NBDYA0A0U1RRE5 68 aa5.25□□□□□ -1.57
HPS4-206ENST00000439453 A0A1B0GVY2 172 aa5.25□□□□□ -1.57
HPS4-206ENST00000439453 SPRR1BP22528 89 aa5.25□□□□□ -1.57
HPS4-206ENST00000439453 Q6ZRN7 208 aaPredicted RBP5.25□□□□□ -1.57
HPS4-206ENST00000439453 PHF5AQ7RTV0 110 aaKnown RBP5.24□□□□□ -1.57
HPS4-206ENST00000439453 LINC01558Q9Y6Z2 57 aa5.24□□□□□ -1.57
HPS4-206ENST00000439453 HSPG2P98160 4391 aa5.24□□□□□ -1.57
HPS4-206ENST00000439453 PLAC8Q9NZF1 115 aa5.23□□□□□ -1.57
HPS4-206ENST00000439453 KRTAP11-1Q8IUC1 163 aa5.22□□□□□ -1.57
HPS4-206ENST00000439453 RYR1P21817 5038 aa5.22□□□□□ -1.57
HPS4-206ENST00000439453 HERC2O95714 4834 aa5.22□□□□□ -1.57
HPS4-206ENST00000439453 KIAA1109Q2LD37 5005 aa5.21□□□□□ -1.57
HPS4-206ENST00000439453 MOBPQ13875 183 aa5.21□□□□□ -1.58
HPS4-206ENST00000439453 TP53AIP1Q9HCN2 124 aa5.21□□□□□ -1.58
HPS4-206ENST00000439453 ASB16-AS1Q495Z4 193 aa5.2□□□□□ -1.58
HPS4-206ENST00000439453 SPINK7P58062 85 aa5.19□□□□□ -1.58
HPS4-206ENST00000439453 HRES1P13985 223 aa5.18□□□□□ -1.58
HPS4-206ENST00000439453 C1orf134Q5TEV5 83 aa5.18□□□□□ -1.58
HPS4-206ENST00000439453 Q96NJ1 140 aa5.18□□□□□ -1.58
HPS4-206ENST00000439453 A0A1B0GU69 56 aa5.18□□□□□ -1.58
HPS4-206ENST00000439453 C8orf87E5RJ46 101 aa5.18□□□□□ -1.58
HPS4-206ENST00000439453 CHTF8P0CG12 524 aa5.18□□□□□ -1.58
HPS4-206ENST00000439453 C4orf48Q5BLP8 95 aa5.18□□□□□ -1.58
HPS4-206ENST00000439453 C8orf17Q9NRJ1 99 aa5.17□□□□□ -1.58
HPS4-206ENST00000439453 SRRM2Q9UQ35 2752 aaKnown RBP5.17□□□□□ -1.58
HPS4-206ENST00000439453 RETNLBQ9BQ08 111 aa5.16□□□□□ -1.58
HPS4-206ENST00000439453 VPS13BQ7Z7G8 4022 aa5.14□□□□□ -1.59
HPS4-206ENST00000439453 KRTAP10-2P60368 255 aa5.14□□□□□ -1.59
HPS4-206ENST00000439453 ACYP2P14621 99 aa5.14□□□□□ -1.59
HPS4-206ENST00000439453 C14orf177Q52M58 125 aa5.14□□□□□ -1.59
HPS4-206ENST00000439453 PRAC1Q96KF2 57 aa5.14□□□□□ -1.59
HPS4-206ENST00000439453 KRTAP17-1Q9BYP8 105 aa5.14□□□□□ -1.59
HPS4-206ENST00000439453 A0A1B0GVX0 72 aa5.13□□□□□ -1.59
HPS4-206ENST00000439453 PRR26Q8N8Z3 221 aa5.13□□□□□ -1.59
HPS4-206ENST00000439453 MRPL34Q9BQ48 92 aaKnown RBP5.12□□□□□ -1.59
HPS4-206ENST00000439453 KRTAP13-1Q8IUC0 172 aa5.12□□□□□ -1.59
HPS4-206ENST00000439453 A0A087WTM6 91 aa5.11□□□□□ -1.59
HPS4-206ENST00000439453 SPINK1P00995 79 aa5.11□□□□□ -1.59
HPS4-206ENST00000439453 H3BS24 57 aa5.11□□□□□ -1.59
HPS4-206ENST00000439453 FAT1Q14517 4588 aa5.11□□□□□ -1.59
HPS4-206ENST00000439453 ABCA13Q86UQ4 5058 aa5.1□□□□□ -1.59
HPS4-206ENST00000439453 PKHD1L1Q86WI1 4243 aa5.1□□□□□ -1.59
HPS4-206ENST00000439453 A0A087X002 238 aa5.09□□□□□ -1.59
HPS4-206ENST00000439453 NOTCH2NLQ7Z3S9 236 aa5.09□□□□□ -1.59
HPS4-206ENST00000439453 LINC00313P59037 77 aa5.09□□□□□ -1.6
HPS4-206ENST00000439453 PCLOQ9Y6V0 5065 aa5.09□□□□□ -1.6
HPS4-206ENST00000439453 CIRBP-AS1Q8TBR5 109 aa5.08□□□□□ -1.6
HPS4-206ENST00000439453 ZNF706Q9Y5V0 76 aaPredicted RBP5.08□□□□□ -1.6
HPS4-206ENST00000439453 LINC01554Q52M75 96 aa5.07□□□□□ -1.6
HPS4-206ENST00000439453 PANO1I0J062 215 aa5.07□□□□□ -1.6
HPS4-206ENST00000439453 UQCR11O14957 56 aa5.07□□□□□ -1.6
HPS4-206ENST00000439453 LINC00483Q53H64 154 aa5.07□□□□□ -1.6
HPS4-206ENST00000439453 K7ERS5 55 aa5.06□□□□□ -1.6
HPS4-206ENST00000439453 MIR22HGQ0VDD5 57 aa5.06□□□□□ -1.6
HPS4-206ENST00000439453 Q5W150 140 aa5.06□□□□□ -1.6
HPS4-206ENST00000439453 IGKV2D-30A0A075B6S6 120 aa5.05□□□□□ -1.6
HPS4-206ENST00000439453 IGKV2-30P06310 120 aa5.05□□□□□ -1.6
HPS4-206ENST00000439453 KRTAP10-1P60331 282 aa5.05□□□□□ -1.6
HPS4-206ENST00000439453 KRTAP13-3Q3SY46 172 aa5.04□□□□□ -1.6
HPS4-206ENST00000439453 Q6ZSA8 131 aa5.02□□□□□ -1.61
HPS4-206ENST00000439453 PLA2G1BP04054 148 aaKnown RBP5.02□□□□□ -1.61
HPS4-206ENST00000439453 ADM2Q7Z4H4 148 aa5.02□□□□□ -1.61
HPS4-206ENST00000439453 ANAPC11Q9NYG5 84 aa5.01□□□□□ -1.61
HPS4-206ENST00000439453 KRTAP4-5Q9BYR2 181 aa5.01□□□□□ -1.61
HPS4-206ENST00000439453 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.01□□□□□ -1.61
HPS4-206ENST00000439453 DMAC1Q96GE9 116 aa5□□□□□ -1.61
HPS4-206ENST00000439453 SPACA4Q8TDM5 124 aa5□□□□□ -1.61
HPS4-206ENST00000439453 IGLV5-52A0A0A0MRZ9 124 aa5□□□□□ -1.61
HPS4-206ENST00000439453 SPATA8Q6RVD6 105 aa4.99□□□□□ -1.61
HPS4-206ENST00000439453 MYCBP2O75592 4640 aa4.97□□□□□ -1.61
HPS4-206ENST00000439453 PSORS1C2Q9UIG4 136 aa4.97□□□□□ -1.61
HPS4-206ENST00000439453 FAT3Q8TDW7 4589 aa4.97□□□□□ -1.61
HPS4-206ENST00000439453 CSAG1Q6PB30 78 aa4.96□□□□□ -1.62
HPS4-206ENST00000439453 FAM229AH3BQW9 127 aa4.95□□□□□ -1.62
HPS4-206ENST00000439453 ZNF861PO60384 105 aa4.95□□□□□ -1.62
HPS4-206ENST00000439453 KRTAP10-4P60372 401 aaPredicted RBP4.94□□□□□ -1.62
HPS4-206ENST00000439453 LRP1Q07954 4544 aaKnown RBP4.93□□□□□ -1.62
HPS4-206ENST00000439453 DMBT1Q9UGM3 2413 aaPredicted RBP4.93□□□□□ -1.62
HPS4-206ENST00000439453 Q8N1X5 172 aa4.93□□□□□ -1.62
HPS4-206ENST00000439453 SSBP3-AS1Q7Z2R9 100 aa4.91□□□□□ -1.62
HPS4-206ENST00000439453 FLG2Q5D862 2391 aaPredicted RBP4.91□□□□□ -1.62
HPS4-206ENST00000439453 SMR3BP02814 79 aaPredicted RBP4.9□□□□□ -1.63
HPS4-206ENST00000439453 TNXBP22105 4242 aa4.89□□□□□ -1.63
HPS4-206ENST00000439453 SPINT4Q6UDR6 99 aa4.88□□□□□ -1.63
HPS4-206ENST00000439453 Q5VSD8 79 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms