RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 CHTF8P0CG12 524 aa4.56□□□□□ -1.68
COL17A1-204ENST00000433822 KRTAP11-1Q8IUC1 163 aa4.56□□□□□ -1.68
COL17A1-204ENST00000433822 DYNC1H1Q14204 4646 aaKnown RBP4.56□□□□□ -1.68
COL17A1-204ENST00000433822 H3BPC8 53 aa4.55□□□□□ -1.68
COL17A1-204ENST00000433822 K7EQZ3 153 aa4.55□□□□□ -1.68
COL17A1-204ENST00000433822 ZCCHC13Q8WW36 166 aaKnown RBP4.55□□□□□ -1.68
COL17A1-204ENST00000433822 A0A087WSZ3 146 aa4.54□□□□□ -1.68
COL17A1-204ENST00000433822 LINC00472Q9H8W2 130 aa4.54□□□□□ -1.68
COL17A1-204ENST00000433822 PLAC8Q9NZF1 115 aa4.54□□□□□ -1.68
COL17A1-204ENST00000433822 SNURFQ9Y675 71 aa4.54□□□□□ -1.68
COL17A1-204ENST00000433822 DNAH11Q96DT5 4516 aa4.53□□□□□ -1.68
COL17A1-204ENST00000433822 A8MWP4 228 aa4.53□□□□□ -1.68
COL17A1-204ENST00000433822 PRR15Q8IV56 129 aa4.53□□□□□ -1.68
COL17A1-204ENST00000433822 VPS13DQ5THJ4 4388 aa4.52□□□□□ -1.69
COL17A1-204ENST00000433822 IGLV5-52A0A0A0MRZ9 124 aa4.52□□□□□ -1.69
COL17A1-204ENST00000433822 NDUFB1O75438 58 aa4.52□□□□□ -1.69
COL17A1-204ENST00000433822 OXTP01178 125 aa4.52□□□□□ -1.69
COL17A1-204ENST00000433822 DMBT1Q9UGM3 2413 aaPredicted RBP4.51□□□□□ -1.69
COL17A1-204ENST00000433822 SMIM26A0A096LP01 95 aa4.51□□□□□ -1.69
COL17A1-204ENST00000433822 PANO1I0J062 215 aa4.51□□□□□ -1.69
COL17A1-204ENST00000433822 RTL8CO15255 209 aa4.51□□□□□ -1.69
COL17A1-204ENST00000433822 HSPG2P98160 4391 aa4.5□□□□□ -1.69
COL17A1-204ENST00000433822 DNAH6Q9C0G6 4158 aa4.5□□□□□ -1.69
COL17A1-204ENST00000433822 ZNF861PO60384 105 aa4.49□□□□□ -1.69
COL17A1-204ENST00000433822 MP68P56378 58 aa4.49□□□□□ -1.69
COL17A1-204ENST00000433822 MOBPQ13875 183 aa4.49□□□□□ -1.69
COL17A1-204ENST00000433822 ASB16-AS1Q495Z4 193 aa4.49□□□□□ -1.69
COL17A1-204ENST00000433822 C1orf134Q5TEV5 83 aa4.49□□□□□ -1.69
COL17A1-204ENST00000433822 Q5XG85 94 aa4.49□□□□□ -1.69
COL17A1-204ENST00000433822 CYP4F30PQ9H0H9 118 aa4.49□□□□□ -1.69
COL17A1-204ENST00000433822 FAM30AQ9NZY2 134 aa4.49□□□□□ -1.69
COL17A1-204ENST00000433822 FAT2Q9NYQ8 4349 aa4.49□□□□□ -1.69
COL17A1-204ENST00000433822 DNAH2Q9P225 4427 aa4.49□□□□□ -1.69
COL17A1-204ENST00000433822 CD164Q04900 197 aa4.48□□□□□ -1.69
COL17A1-204ENST00000433822 CASC2Q6XLA1 102 aa4.48□□□□□ -1.69
COL17A1-204ENST00000433822 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
COL17A1-204ENST00000433822 hDV103S1A0JD37 113 aa4.47□□□□□ -1.69
COL17A1-204ENST00000433822 SPANXA2-OT1Q8N9U9 137 aa4.47□□□□□ -1.69
COL17A1-204ENST00000433822 TP53AIP1Q9HCN2 124 aa4.47□□□□□ -1.69
COL17A1-204ENST00000433822 PSORS1C2Q9UIG4 136 aa4.47□□□□□ -1.69
COL17A1-204ENST00000433822 A0A0G2JQZ4 141 aa4.46□□□□□ -1.7
COL17A1-204ENST00000433822 Q96NJ1 140 aa4.46□□□□□ -1.7
COL17A1-204ENST00000433822 DNAH17Q9UFH2 4485 aa4.46□□□□□ -1.7
COL17A1-204ENST00000433822 MMP24-AS1A0A0U1RRL7 71 aa4.45□□□□□ -1.7
COL17A1-204ENST00000433822 IGKV2-30P06310 120 aa4.45□□□□□ -1.7
COL17A1-204ENST00000433822 TRAV22A0A0B4J277 110 aa4.44□□□□□ -1.7
COL17A1-204ENST00000433822 SSBP3-AS1Q7Z2R9 100 aa4.44□□□□□ -1.7
COL17A1-204ENST00000433822 WFDC13Q8IUB5 93 aa4.44□□□□□ -1.7
COL17A1-204ENST00000433822 PKD1P98161 4303 aa4.44□□□□□ -1.7
COL17A1-204ENST00000433822 IGLV7-43P04211 117 aa4.43□□□□□ -1.7
COL17A1-204ENST00000433822 APOBP04114 4563 aaKnown RBP4.43□□□□□ -1.7
COL17A1-204ENST00000433822 A0A1B0GVX0 72 aa4.42□□□□□ -1.7
COL17A1-204ENST00000433822 H0Y9P7 68 aa4.42□□□□□ -1.7
COL17A1-204ENST00000433822 LY6G6CO95867 125 aa4.42□□□□□ -1.7
COL17A1-204ENST00000433822 DEFB116Q30KQ4 102 aa4.42□□□□□ -1.7
COL17A1-204ENST00000433822 Q6ZSA8 131 aa4.42□□□□□ -1.7
COL17A1-204ENST00000433822 FP248Q71RG6 208 aaPredicted RBP4.42□□□□□ -1.7
COL17A1-204ENST00000433822 IGLV9-49A0A0B4J1Y8 123 aa4.41□□□□□ -1.7
COL17A1-204ENST00000433822 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
COL17A1-204ENST00000433822 C8orf17Q9NRJ1 99 aa4.41□□□□□ -1.7
COL17A1-204ENST00000433822 SRRM2Q9UQ35 2752 aaKnown RBP4.4□□□□□ -1.7
COL17A1-204ENST00000433822 FAM229BQ4G0N7 80 aa4.4□□□□□ -1.71
COL17A1-204ENST00000433822 CDK2AP2O75956 126 aa4.39□□□□□ -1.71
COL17A1-204ENST00000433822 C4orf26Q17RF5 130 aa4.39□□□□□ -1.71
COL17A1-204ENST00000433822 LINC00208Q96KT6 92 aa4.39□□□□□ -1.71
COL17A1-204ENST00000433822 MYCBP2O75592 4640 aa4.38□□□□□ -1.71
COL17A1-204ENST00000433822 C8orf87E5RJ46 101 aa4.38□□□□□ -1.71
COL17A1-204ENST00000433822 Q1T7F1 81 aa4.38□□□□□ -1.71
COL17A1-204ENST00000433822 C1orf64Q8NEQ6 169 aa4.38□□□□□ -1.71
COL17A1-204ENST00000433822 MRPL34Q9BQ48 92 aaKnown RBP4.38□□□□□ -1.71
COL17A1-204ENST00000433822 V9GYY9 64 aa4.38□□□□□ -1.71
COL17A1-204ENST00000433822 LRP1BQ9NZR2 4599 aa4.37□□□□□ -1.71
COL17A1-204ENST00000433822 IGLV7-46A0A075B6I9 117 aa4.36□□□□□ -1.71
COL17A1-204ENST00000433822 C1orf195Q5TG92 126 aa4.36□□□□□ -1.71
COL17A1-204ENST00000433822 HRCT1Q6UXD1 115 aa4.36□□□□□ -1.71
COL17A1-204ENST00000433822 CIRBP-AS1Q8TBR5 109 aa4.36□□□□□ -1.71
COL17A1-204ENST00000433822 FLG2Q5D862 2391 aaPredicted RBP4.35□□□□□ -1.71
COL17A1-204ENST00000433822 A0A1B0GVY2 172 aa4.35□□□□□ -1.71
COL17A1-204ENST00000433822 LOC101927531A0A1B0GV80 90 aa4.33□□□□□ -1.72
COL17A1-204ENST00000433822 IGHV6-1A0A0B4J1U7 121 aa4.32□□□□□ -1.72
COL17A1-204ENST00000433822 LIMD2Q9BT23 127 aa4.32□□□□□ -1.72
COL17A1-204ENST00000433822 PRO0628Q9UI54 55 aa4.32□□□□□ -1.72
COL17A1-204ENST00000433822 HMCN2Q8NDA2 5059 aa4.32□□□□□ -1.72
COL17A1-204ENST00000433822 DNAH5Q8TE73 4624 aa4.32□□□□□ -1.72
COL17A1-204ENST00000433822 RPS29P62273 56 aaKnown RBP4.31□□□□□ -1.72
COL17A1-204ENST00000433822 KRTAP13-3Q3SY46 172 aa4.31□□□□□ -1.72
COL17A1-204ENST00000433822 KRTAP10-1P60331 282 aa4.3□□□□□ -1.72
COL17A1-204ENST00000433822 LINC00336Q6ZUF6 198 aa4.3□□□□□ -1.72
COL17A1-204ENST00000433822 ANAPC11Q9NYG5 84 aa4.3□□□□□ -1.72
COL17A1-204ENST00000433822 FAT1Q14517 4588 aa4.3□□□□□ -1.72
COL17A1-204ENST00000433822 DNAH8Q96JB1 4490 aa4.29□□□□□ -1.72
COL17A1-204ENST00000433822 KRTAP1-4P0C5Y4 121 aa4.28□□□□□ -1.72
COL17A1-204ENST00000433822 KRTAP13-2Q52LG2 175 aa4.28□□□□□ -1.72
COL17A1-204ENST00000433822 A0A087X002 238 aa4.27□□□□□ -1.73
COL17A1-204ENST00000433822 NDUFS5O43920 106 aa4.27□□□□□ -1.73
COL17A1-204ENST00000433822 MPLKIPQ8TAP9 179 aa4.27□□□□□ -1.73
COL17A1-204ENST00000433822 SPINK1P00995 79 aa4.26□□□□□ -1.73
COL17A1-204ENST00000433822 LINC00313P59037 77 aa4.26□□□□□ -1.73
COL17A1-204ENST00000433822 SPINK6Q6UWN8 80 aa4.26□□□□□ -1.73
COL17A1-204ENST00000433822 NOTCH2NLQ7Z3S9 236 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms