RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 VAMP3Q15836 100 aa1.69□□□□□ -2.14
PTPN4-204ENST00000431283 Q6JHZ5 121 aa1.69□□□□□ -2.14
PTPN4-204ENST00000431283 SLC7A5P1Q8MH63 180 aa1.69□□□□□ -2.14
PTPN4-204ENST00000431283 PMCHL2Q9BQD1 86 aa1.69□□□□□ -2.14
PTPN4-204ENST00000431283 TRAV13-2A0A0B4J235 113 aa1.68□□□□□ -2.14
PTPN4-204ENST00000431283 A0A0G2JQZ4 141 aa1.68□□□□□ -2.14
PTPN4-204ENST00000431283 FAM236DA0A1B0GTK5 79 aa1.68□□□□□ -2.14
PTPN4-204ENST00000431283 LST1O00453 97 aa1.68□□□□□ -2.14
PTPN4-204ENST00000431283 FAM236CP0DP71 79 aa1.68□□□□□ -2.14
PTPN4-204ENST00000431283 SCGB1D4Q6XE38 83 aa1.68□□□□□ -2.14
PTPN4-204ENST00000431283 Q96NJ1 140 aa1.68□□□□□ -2.14
PTPN4-204ENST00000431283 TRBV7-7A0A0K0K1E9 115 aa1.67□□□□□ -2.14
PTPN4-204ENST00000431283 TRGC2P03986 189 aa1.67□□□□□ -2.14
PTPN4-204ENST00000431283 IFITM1P13164 125 aa1.67□□□□□ -2.14
PTPN4-204ENST00000431283 CLEC2BQ92478 149 aa1.67□□□□□ -2.14
PTPN4-204ENST00000431283 RBM12B-AS1Q9P1G2 102 aa1.67□□□□□ -2.14
PTPN4-204ENST00000431283 NEBP20929 6669 aa1.67□□□□□ -2.14
PTPN4-204ENST00000431283 BPY2O14599 106 aa1.66□□□□□ -2.14
PTPN4-204ENST00000431283 OCIAD2Q56VL3 154 aa1.66□□□□□ -2.14
PTPN4-204ENST00000431283 SNHG12Q9BXW3 62 aa1.66□□□□□ -2.14
PTPN4-204ENST00000431283 SS18L2Q9UHA2 77 aa1.66□□□□□ -2.14
PTPN4-204ENST00000431283 hADV29S1A0JD25 119 aa1.65□□□□□ -2.15
PTPN4-204ENST00000431283 SYS1-DBNDD2H3BUS1 97 aa1.65□□□□□ -2.15
PTPN4-204ENST00000431283 SNCGO76070 127 aa1.65□□□□□ -2.15
PTPN4-204ENST00000431283 MT2AP02795 61 aa1.65□□□□□ -2.15
PTPN4-204ENST00000431283 Q6ZQY7 126 aa1.65□□□□□ -2.15
PTPN4-204ENST00000431283 MUSTN1Q8IVN3 82 aa1.65□□□□□ -2.15
PTPN4-204ENST00000431283 SMIM11BQ8TCY0 68 aa1.65□□□□□ -2.15
PTPN4-204ENST00000431283 PPDPFLQ8WWR9 84 aa1.65□□□□□ -2.15
PTPN4-204ENST00000431283 C20orf166-AS1Q96NR2 134 aa1.65□□□□□ -2.15
PTPN4-204ENST00000431283 YPEL4Q96NS1 127 aa1.65□□□□□ -2.15
PTPN4-204ENST00000431283 LINC01545Q5VT33 79 aa1.64□□□□□ -2.15
PTPN4-204ENST00000431283 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.64□□□□□ -2.15
PTPN4-204ENST00000431283 LINC00575Q6W349 94 aa1.64□□□□□ -2.15
PTPN4-204ENST00000431283 C12orf57Q99622 126 aa1.64□□□□□ -2.15
PTPN4-204ENST00000431283 TTTY13Q9BZ97 58 aa1.64□□□□□ -2.15
PTPN4-204ENST00000431283 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
PTPN4-204ENST00000431283 H3BUT2 72 aa1.63□□□□□ -2.15
PTPN4-204ENST00000431283 MT1FP04733 61 aa1.63□□□□□ -2.15
PTPN4-204ENST00000431283 LINC00313P59037 77 aa1.63□□□□□ -2.15
PTPN4-204ENST00000431283 BVES-AS1Q5T3Y7 98 aa1.63□□□□□ -2.15
PTPN4-204ENST00000431283 A0A087WSZ3 146 aa1.62□□□□□ -2.15
PTPN4-204ENST00000431283 KRTDAPP60985 99 aa1.62□□□□□ -2.15
PTPN4-204ENST00000431283 TEN1Q86WV5 123 aa1.62□□□□□ -2.15
PTPN4-204ENST00000431283 SIGMAR1Q99720 223 aa1.62□□□□□ -2.15
PTPN4-204ENST00000431283 A8MWP4 228 aa1.61□□□□□ -2.15
PTPN4-204ENST00000431283 C3orf79P0CE67 100 aa1.61□□□□□ -2.15
PTPN4-204ENST00000431283 KRTAP19-6Q3LI70 58 aa1.61□□□□□ -2.15
PTPN4-204ENST00000431283 MDN1Q9NU22 5596 aa1.61□□□□□ -2.15
PTPN4-204ENST00000431283 HSBP1L1C9JCN9 74 aa1.6□□□□□ -2.15
PTPN4-204ENST00000431283 H3BMG7 143 aa1.6□□□□□ -2.15
PTPN4-204ENST00000431283 FABP2P12104 132 aa1.6□□□□□ -2.15
PTPN4-204ENST00000431283 HRES1P13985 223 aa1.6□□□□□ -2.15
PTPN4-204ENST00000431283 IGHV6-1A0A0B4J1U7 121 aa1.59□□□□□ -2.15
PTPN4-204ENST00000431283 H0YGX0 51 aa1.59□□□□□ -2.15
PTPN4-204ENST00000431283 HIST1H2BKO60814 126 aa1.59□□□□□ -2.15
PTPN4-204ENST00000431283 HIST1H2BJP06899 126 aa1.59□□□□□ -2.15
PTPN4-204ENST00000431283 HIST1H2BOP23527 126 aa1.59□□□□□ -2.15
PTPN4-204ENST00000431283 HIST1H2BBP33778 126 aa1.59□□□□□ -2.15
PTPN4-204ENST00000431283 HIST1H2BDP58876 126 aa1.59□□□□□ -2.15
PTPN4-204ENST00000431283 HIST1H2BCP62807 126 aa1.59□□□□□ -2.15
PTPN4-204ENST00000431283 HIST2H2BEQ16778 126 aa1.59□□□□□ -2.15
PTPN4-204ENST00000431283 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.59□□□□□ -2.15
PTPN4-204ENST00000431283 ATOH7Q8N100 152 aa1.59□□□□□ -2.15
PTPN4-204ENST00000431283 HIST1H2BHQ93079 126 aa1.59□□□□□ -2.15
PTPN4-204ENST00000431283 HIST1H2BNQ99877 126 aa1.59□□□□□ -2.15
PTPN4-204ENST00000431283 HIST1H2BMQ99879 126 aa1.59□□□□□ -2.15
PTPN4-204ENST00000431283 TRBV7-4A0A0J9YYF1 115 aa1.58□□□□□ -2.16
PTPN4-204ENST00000431283 H3BQ85 93 aa1.58□□□□□ -2.16
PTPN4-204ENST00000431283 SPINK7P58062 85 aa1.58□□□□□ -2.16
PTPN4-204ENST00000431283 LYRM7Q5U5X0 104 aa1.58□□□□□ -2.16
PTPN4-204ENST00000431283 ANKRD29Q8N6D5 301 aa1.58□□□□□ -2.16
PTPN4-204ENST00000431283 RAB37Q96AX2 223 aa1.58□□□□□ -2.16
PTPN4-204ENST00000431283 A0A1B0GX51 115 aa1.57□□□□□ -2.16
PTPN4-204ENST00000431283 A0A1W2PNM2 257 aa1.57□□□□□ -2.16
PTPN4-204ENST00000431283 C8orf87E5RJ46 101 aa1.57□□□□□ -2.16
PTPN4-204ENST00000431283 DSCR8Q96T75 97 aa1.57□□□□□ -2.16
PTPN4-204ENST00000431283 NDUFB1O75438 58 aa1.56□□□□□ -2.16
PTPN4-204ENST00000431283 DNAL4O96015 105 aa1.56□□□□□ -2.16
PTPN4-204ENST00000431283 TRACP01848 142 aa1.56□□□□□ -2.16
PTPN4-204ENST00000431283 S100A2P29034 98 aa1.56□□□□□ -2.16
PTPN4-204ENST00000431283 KMT2DO14686 5537 aa1.56□□□□□ -2.16
PTPN4-204ENST00000431283 J3KT08 172 aa1.55□□□□□ -2.16
PTPN4-204ENST00000431283 TMEM256-PLSCR3K7ERE1 68 aa1.55□□□□□ -2.16
PTPN4-204ENST00000431283 CCKP06307 115 aa1.55□□□□□ -2.16
PTPN4-204ENST00000431283 KRTAP20-1Q3LI63 56 aa1.55□□□□□ -2.16
PTPN4-204ENST00000431283 WFDC13Q8IUB5 93 aa1.55□□□□□ -2.16
PTPN4-204ENST00000431283 LINC00472Q9H8W2 130 aa1.55□□□□□ -2.16
PTPN4-204ENST00000431283 ORMDL1Q9P0S3 153 aa1.55□□□□□ -2.16
PTPN4-204ENST00000431283 A0A0B4J2C4 111 aa1.54□□□□□ -2.16
PTPN4-204ENST00000431283 A0A1B0GV72 72 aa1.54□□□□□ -2.16
PTPN4-204ENST00000431283 A6NN06 94 aa1.54□□□□□ -2.16
PTPN4-204ENST00000431283 COX6CP09669 75 aa1.54□□□□□ -2.16
PTPN4-204ENST00000431283 H1FX-AS1Q4G0G2 97 aa1.54□□□□□ -2.16
PTPN4-204ENST00000431283 VPS25Q9BRG1 176 aa1.54□□□□□ -2.16
PTPN4-204ENST00000431283 PRO1854Q9UHT4 67 aa1.54□□□□□ -2.16
PTPN4-204ENST00000431283 IGKV3D-7A0A0C4DH55 119 aa1.53□□□□□ -2.16
PTPN4-204ENST00000431283 DLEU1O43261 78 aa1.53□□□□□ -2.16
PTPN4-204ENST00000431283 COX8AP10176 69 aa1.53□□□□□ -2.16
PTPN4-204ENST00000431283 PSMB2P49721 201 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms