RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 ALMS1Q8TCU4 4167 aa6.62□□□□□ -1.35
SEMA4D-209ENST00000429836 ANAPC11Q9NYG5 84 aa6.61□□□□□ -1.35
SEMA4D-209ENST00000429836 CMYA5Q8N3K9 4069 aa6.6□□□□□ -1.35
SEMA4D-209ENST00000429836 PLA2G1BP04054 148 aaKnown RBP6.6□□□□□ -1.35
SEMA4D-209ENST00000429836 KRTAP13-1Q8IUC0 172 aa6.6□□□□□ -1.35
SEMA4D-209ENST00000429836 SPINK6Q6UWN8 80 aa6.59□□□□□ -1.35
SEMA4D-209ENST00000429836 ACYP2P14621 99 aa6.58□□□□□ -1.36
SEMA4D-209ENST00000429836 A0A1B0GU69 56 aa6.57□□□□□ -1.36
SEMA4D-209ENST00000429836 RTL8CO15255 209 aa6.55□□□□□ -1.36
SEMA4D-209ENST00000429836 KRTAP13-3Q3SY46 172 aa6.55□□□□□ -1.36
SEMA4D-209ENST00000429836 RETNLBQ9BQ08 111 aa6.55□□□□□ -1.36
SEMA4D-209ENST00000429836 SPATA8Q6RVD6 105 aa6.53□□□□□ -1.36
SEMA4D-209ENST00000429836 DNHD1Q96M86 4753 aa6.53□□□□□ -1.36
SEMA4D-209ENST00000429836 HUWE1Q7Z6Z7 4374 aaKnown RBP6.52□□□□□ -1.37
SEMA4D-209ENST00000429836 WWC2-AS2Q96NR7 200 aa6.52□□□□□ -1.37
SEMA4D-209ENST00000429836 DNAH3Q8TD57 4116 aa6.52□□□□□ -1.37
SEMA4D-209ENST00000429836 MIR22HGQ0VDD5 57 aa6.51□□□□□ -1.37
SEMA4D-209ENST00000429836 DMAC1Q96GE9 116 aa6.51□□□□□ -1.37
SEMA4D-209ENST00000429836 CSAG1Q6PB30 78 aa6.51□□□□□ -1.37
SEMA4D-209ENST00000429836 UBE2DNLQ8IWF7 75 aa6.51□□□□□ -1.37
SEMA4D-209ENST00000429836 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.51□□□□□ -1.37
SEMA4D-209ENST00000429836 LINC00483Q53H64 154 aa6.5□□□□□ -1.37
SEMA4D-209ENST00000429836 DNAH7Q8WXX0 4024 aa6.5□□□□□ -1.37
SEMA4D-209ENST00000429836 C14orf177Q52M58 125 aa6.5□□□□□ -1.37
SEMA4D-209ENST00000429836 FRAS1Q86XX4 4008 aa6.49□□□□□ -1.37
SEMA4D-209ENST00000429836 UQCR11O14957 56 aa6.47□□□□□ -1.37
SEMA4D-209ENST00000429836 DNAH8Q96JB1 4490 aa6.45□□□□□ -1.38
SEMA4D-209ENST00000429836 TGP01266 2768 aa6.45□□□□□ -1.38
SEMA4D-209ENST00000429836 PSORS1C2Q9UIG4 136 aa6.44□□□□□ -1.38
SEMA4D-209ENST00000429836 CIRBP-AS1Q8TBR5 109 aa6.43□□□□□ -1.38
SEMA4D-209ENST00000429836 ZNF706Q9Y5V0 76 aaPredicted RBP6.43□□□□□ -1.38
SEMA4D-209ENST00000429836 SPACA4Q8TDM5 124 aa6.43□□□□□ -1.38
SEMA4D-209ENST00000429836 IGKV2-30P06310 120 aa6.39□□□□□ -1.39
SEMA4D-209ENST00000429836 PLECQ15149 4684 aaKnown RBP6.39□□□□□ -1.39
SEMA4D-209ENST00000429836 IGLV5-52A0A0A0MRZ9 124 aa6.39□□□□□ -1.39
SEMA4D-209ENST00000429836 APLNQ9ULZ1 77 aa6.39□□□□□ -1.39
SEMA4D-209ENST00000429836 ZNF861PO60384 105 aa6.38□□□□□ -1.39
SEMA4D-209ENST00000429836 MEGF8Q7Z7M0 2845 aa6.38□□□□□ -1.39
SEMA4D-209ENST00000429836 FAM229AH3BQW9 127 aa6.37□□□□□ -1.39
SEMA4D-209ENST00000429836 IGKV2D-30A0A075B6S6 120 aa6.36□□□□□ -1.39
SEMA4D-209ENST00000429836 Q6ZRN7 208 aaPredicted RBP6.36□□□□□ -1.39
SEMA4D-209ENST00000429836 FBN3Q75N90 2809 aa6.36□□□□□ -1.39
SEMA4D-209ENST00000429836 SPINK1P00995 79 aa6.35□□□□□ -1.39
SEMA4D-209ENST00000429836 NBDYA0A0U1RRE5 68 aa6.35□□□□□ -1.39
SEMA4D-209ENST00000429836 HECTD4Q9Y4D8 3996 aa6.35□□□□□ -1.39
SEMA4D-209ENST00000429836 C1orf134Q5TEV5 83 aa6.34□□□□□ -1.39
SEMA4D-209ENST00000429836 IGLV7-43P04211 117 aa6.32□□□□□ -1.4
SEMA4D-209ENST00000429836 DNAH17Q9UFH2 4485 aa6.3□□□□□ -1.4
SEMA4D-209ENST00000429836 PRKDCP78527 4128 aaKnown RBP6.29□□□□□ -1.4
SEMA4D-209ENST00000429836 KMT2AQ03164 3969 aa6.28□□□□□ -1.4
SEMA4D-209ENST00000429836 A0A087WTM6 91 aa6.28□□□□□ -1.4
SEMA4D-209ENST00000429836 STARD9Q9P2P6 4700 aa6.27□□□□□ -1.41
SEMA4D-209ENST00000429836 Q8N1X5 172 aa6.27□□□□□ -1.41
SEMA4D-209ENST00000429836 KRTAP16-1A8MUX0 517 aa6.26□□□□□ -1.41
SEMA4D-209ENST00000429836 DYNC2H1Q8NCM8 4307 aaKnown RBP6.26□□□□□ -1.41
SEMA4D-209ENST00000429836 FLG2Q5D862 2391 aaPredicted RBP6.25□□□□□ -1.41
SEMA4D-209ENST00000429836 VPS13DQ5THJ4 4388 aa6.23□□□□□ -1.41
SEMA4D-209ENST00000429836 SSBP3-AS1Q7Z2R9 100 aa6.23□□□□□ -1.41
SEMA4D-209ENST00000429836 H0YAA0 97 aa6.23□□□□□ -1.41
SEMA4D-209ENST00000429836 A8MUU9 505 aa6.22□□□□□ -1.41
SEMA4D-209ENST00000429836 ROMO1P60602 79 aa6.22□□□□□ -1.41
SEMA4D-209ENST00000429836 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
SEMA4D-209ENST00000429836 Q6ZSA8 131 aa6.22□□□□□ -1.41
SEMA4D-209ENST00000429836 LINC00304Q8N9R0 145 aa6.21□□□□□ -1.42
SEMA4D-209ENST00000429836 CRIPTQ9P021 101 aa6.2□□□□□ -1.42
SEMA4D-209ENST00000429836 KRTAP13-2Q52LG2 175 aa6.19□□□□□ -1.42
SEMA4D-209ENST00000429836 TYMSOSQ8TAI1 123 aa6.18□□□□□ -1.42
SEMA4D-209ENST00000429836 DNAH2Q9P225 4427 aa6.18□□□□□ -1.42
SEMA4D-209ENST00000429836 LY6G6CO95867 125 aa6.17□□□□□ -1.42
SEMA4D-209ENST00000429836 DNAH6Q9C0G6 4158 aa6.14□□□□□ -1.43
SEMA4D-209ENST00000429836 DNAH11Q96DT5 4516 aa6.11□□□□□ -1.43
SEMA4D-209ENST00000429836 A0A1B0GU33 70 aa6.11□□□□□ -1.43
SEMA4D-209ENST00000429836 NUPR2A6NF83 97 aa6.11□□□□□ -1.43
SEMA4D-209ENST00000429836 P0C880 135 aa6.08□□□□□ -1.44
SEMA4D-209ENST00000429836 H1FX-AS1Q4G0G2 97 aa6.06□□□□□ -1.44
SEMA4D-209ENST00000429836 LRP1BQ9NZR2 4599 aa6.04□□□□□ -1.44
SEMA4D-209ENST00000429836 DNAH5Q8TE73 4624 aa6.03□□□□□ -1.44
SEMA4D-209ENST00000429836 KRTAP3-1Q9BYR8 98 aa6.02□□□□□ -1.45
SEMA4D-209ENST00000429836 HYDINQ4G0P3 5121 aa6.01□□□□□ -1.45
SEMA4D-209ENST00000429836 KRTAP1-4P0C5Y4 121 aa6.01□□□□□ -1.45
SEMA4D-209ENST00000429836 KRTAP10-2P60368 255 aa6.01□□□□□ -1.45
SEMA4D-209ENST00000429836 K7ERS5 55 aa5.96□□□□□ -1.46
SEMA4D-209ENST00000429836 COX6B2Q6YFQ2 88 aa5.96□□□□□ -1.46
SEMA4D-209ENST00000429836 C9orf92A6NGG3 77 aa5.95□□□□□ -1.46
SEMA4D-209ENST00000429836 SPINT4Q6UDR6 99 aa5.95□□□□□ -1.46
SEMA4D-209ENST00000429836 VPS13BQ7Z7G8 4022 aa5.95□□□□□ -1.46
SEMA4D-209ENST00000429836 DMBT1Q9UGM3 2413 aaPredicted RBP5.94□□□□□ -1.46
SEMA4D-209ENST00000429836 KRTAP10-1P60331 282 aa5.92□□□□□ -1.46
SEMA4D-209ENST00000429836 FAT2Q9NYQ8 4349 aa5.91□□□□□ -1.46
SEMA4D-209ENST00000429836 TPRXLQ17RH7 258 aa5.9□□□□□ -1.47
SEMA4D-209ENST00000429836 NDUFAF8A1L188 74 aa5.88□□□□□ -1.47
SEMA4D-209ENST00000429836 A0A0D9SG42 100 aa5.88□□□□□ -1.47
SEMA4D-209ENST00000429836 C10orf95Q9H7T3 257 aa5.88□□□□□ -1.47
SEMA4D-209ENST00000429836 PKHD1P08F94 4074 aa5.87□□□□□ -1.47
SEMA4D-209ENST00000429836 PKD1P98161 4303 aa5.85□□□□□ -1.47
SEMA4D-209ENST00000429836 KRTAP13-4Q3LI77 160 aa5.84□□□□□ -1.47
SEMA4D-209ENST00000429836 A0A0A0MQY5 61 aa5.84□□□□□ -1.48
SEMA4D-209ENST00000429836 RPL37P61927 97 aaKnown RBP5.83□□□□□ -1.48
SEMA4D-209ENST00000429836 C20orf166-AS1Q96NR2 134 aa5.83□□□□□ -1.48
SEMA4D-209ENST00000429836 KMT2CQ8NEZ4 4911 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms