RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 LINC00472Q9H8W2 130 aa8.83□□□□□ -1
SYNGAP1-203ENST00000428982 VWFP04275 2813 aa8.82□□□□□ -1
SYNGAP1-203ENST00000428982 TRRAPQ9Y4A5 3859 aa8.8□□□□□ -1
SYNGAP1-203ENST00000428982 SPRR1BP22528 89 aa8.8□□□□□ -1
SYNGAP1-203ENST00000428982 A0A087WTM6 91 aa8.8□□□□□ -1
SYNGAP1-203ENST00000428982 A0A1B0GVX0 72 aa8.79□□□□□ -1
SYNGAP1-203ENST00000428982 KRTAP25-1Q3LHN0 102 aa8.79□□□□□ -1
SYNGAP1-203ENST00000428982 STAB2Q8WWQ8 2551 aa8.79□□□□□ -1
SYNGAP1-203ENST00000428982 ANK2Q01484 3957 aa8.78□□□□□ -1
SYNGAP1-203ENST00000428982 CHTF8P0CG12 524 aa8.77□□□□□ -1
SYNGAP1-203ENST00000428982 FBN1P35555 2871 aaKnown RBP8.76□□□□□ -1.01
SYNGAP1-203ENST00000428982 KRTAP1-5Q9BYS1 174 aa8.73□□□□□ -1.01
SYNGAP1-203ENST00000428982 KRTAP16-1A8MUX0 517 aa8.72□□□□□ -1.01
SYNGAP1-203ENST00000428982 ZNF861PO60384 105 aa8.71□□□□□ -1.01
SYNGAP1-203ENST00000428982 DNAH3Q8TD57 4116 aa8.68□□□□□ -1.02
SYNGAP1-203ENST00000428982 CRIPTQ9P021 101 aa8.68□□□□□ -1.02
SYNGAP1-203ENST00000428982 IGKV2D-30A0A075B6S6 120 aa8.67□□□□□ -1.02
SYNGAP1-203ENST00000428982 IGKV2-30P06310 120 aa8.67□□□□□ -1.02
SYNGAP1-203ENST00000428982 TENM3Q9P273 2699 aa8.66□□□□□ -1.02
SYNGAP1-203ENST00000428982 KRTAP7-1Q8IUC3 87 aa8.66□□□□□ -1.02
SYNGAP1-203ENST00000428982 DMAC1Q96GE9 116 aa8.65□□□□□ -1.02
SYNGAP1-203ENST00000428982 IGLV7-43P04211 117 aa8.64□□□□□ -1.03
SYNGAP1-203ENST00000428982 FAM229AH3BQW9 127 aa8.63□□□□□ -1.03
SYNGAP1-203ENST00000428982 FLG2Q5D862 2391 aaPredicted RBP8.62□□□□□ -1.03
SYNGAP1-203ENST00000428982 PKD1L1Q8TDX9 2849 aa8.6□□□□□ -1.03
SYNGAP1-203ENST00000428982 NDUFAF8A1L188 74 aa8.59□□□□□ -1.03
SYNGAP1-203ENST00000428982 A8MUU9 505 aa8.58□□□□□ -1.04
SYNGAP1-203ENST00000428982 CIRBP-AS1Q8TBR5 109 aa8.58□□□□□ -1.04
SYNGAP1-203ENST00000428982 LINC00483Q53H64 154 aa8.54□□□□□ -1.04
SYNGAP1-203ENST00000428982 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.53□□□□□ -1.04
SYNGAP1-203ENST00000428982 SPACA4Q8TDM5 124 aa8.52□□□□□ -1.05
SYNGAP1-203ENST00000428982 Q5W150 140 aa8.5□□□□□ -1.05
SYNGAP1-203ENST00000428982 Q6ZRN7 208 aaPredicted RBP8.49□□□□□ -1.05
SYNGAP1-203ENST00000428982 PSORS1C2Q9UIG4 136 aa8.49□□□□□ -1.05
SYNGAP1-203ENST00000428982 A0A1B0GU33 70 aa8.47□□□□□ -1.05
SYNGAP1-203ENST00000428982 LUZP6Q538Z0 58 aa8.45□□□□□ -1.06
SYNGAP1-203ENST00000428982 LINC00304Q8N9R0 145 aa8.45□□□□□ -1.06
SYNGAP1-203ENST00000428982 C20orf166-AS1Q96NR2 134 aa8.45□□□□□ -1.06
SYNGAP1-203ENST00000428982 NOTCH2NLQ7Z3S9 236 aa8.43□□□□□ -1.06
SYNGAP1-203ENST00000428982 KRTAP13-1Q8IUC0 172 aa8.43□□□□□ -1.06
SYNGAP1-203ENST00000428982 KRTAP11-1Q8IUC1 163 aa8.4□□□□□ -1.06
SYNGAP1-203ENST00000428982 KRTAP10-2P60368 255 aa8.4□□□□□ -1.07
SYNGAP1-203ENST00000428982 P0C880 135 aa8.39□□□□□ -1.07
SYNGAP1-203ENST00000428982 Q96NJ1 140 aa8.38□□□□□ -1.07
SYNGAP1-203ENST00000428982 SMR3BP02814 79 aaPredicted RBP8.38□□□□□ -1.07
SYNGAP1-203ENST00000428982 DNHD1Q96M86 4753 aa8.37□□□□□ -1.07
SYNGAP1-203ENST00000428982 Q8N1X5 172 aa8.37□□□□□ -1.07
SYNGAP1-203ENST00000428982 ANAPC11Q9NYG5 84 aa8.35□□□□□ -1.07
SYNGAP1-203ENST00000428982 PANO1I0J062 215 aa8.35□□□□□ -1.07
SYNGAP1-203ENST00000428982 KRTAP10-1P60331 282 aa8.33□□□□□ -1.08
SYNGAP1-203ENST00000428982 TYMSOSQ8TAI1 123 aa8.33□□□□□ -1.08
SYNGAP1-203ENST00000428982 COL7A1Q02388 2944 aa8.31□□□□□ -1.08
SYNGAP1-203ENST00000428982 LYSTQ99698 3801 aa8.29□□□□□ -1.08
SYNGAP1-203ENST00000428982 HUWE1Q7Z6Z7 4374 aaKnown RBP8.29□□□□□ -1.08
SYNGAP1-203ENST00000428982 H1FX-AS1Q4G0G2 97 aa8.25□□□□□ -1.09
SYNGAP1-203ENST00000428982 TGP01266 2768 aa8.24□□□□□ -1.09
SYNGAP1-203ENST00000428982 DMBT1Q9UGM3 2413 aaPredicted RBP8.24□□□□□ -1.09
SYNGAP1-203ENST00000428982 CSMD3Q7Z407 3707 aa8.24□□□□□ -1.09
SYNGAP1-203ENST00000428982 DNAH9Q9NYC9 4486 aa8.24□□□□□ -1.09
SYNGAP1-203ENST00000428982 PRKDCP78527 4128 aaKnown RBP8.23□□□□□ -1.09
SYNGAP1-203ENST00000428982 H0YAA0 97 aa8.22□□□□□ -1.09
SYNGAP1-203ENST00000428982 Q6ZSA8 131 aa8.22□□□□□ -1.09
SYNGAP1-203ENST00000428982 TENM2Q9NT68 2774 aa8.21□□□□□ -1.1
SYNGAP1-203ENST00000428982 DNAH7Q8WXX0 4024 aa8.19□□□□□ -1.1
SYNGAP1-203ENST00000428982 A0A0D9SG42 100 aa8.19□□□□□ -1.1
SYNGAP1-203ENST00000428982 DNAH1Q9P2D7 4330 aa8.17□□□□□ -1.1
SYNGAP1-203ENST00000428982 DYNC2H1Q8NCM8 4307 aaKnown RBP8.16□□□□□ -1.1
SYNGAP1-203ENST00000428982 FBN3Q75N90 2809 aa8.16□□□□□ -1.1
SYNGAP1-203ENST00000428982 RPL37P61927 97 aaKnown RBP8.13□□□□□ -1.11
SYNGAP1-203ENST00000428982 KRTAP13-3Q3SY46 172 aa8.12□□□□□ -1.11
SYNGAP1-203ENST00000428982 MEGF8Q7Z7M0 2845 aa8.1□□□□□ -1.11
SYNGAP1-203ENST00000428982 Q5VSD8 79 aa8.05□□□□□ -1.12
SYNGAP1-203ENST00000428982 SEC61BP60468 96 aaKnown RBP8.04□□□□□ -1.12
SYNGAP1-203ENST00000428982 STARD9Q9P2P6 4700 aa8.03□□□□□ -1.12
SYNGAP1-203ENST00000428982 PLECQ15149 4684 aaKnown RBP8.02□□□□□ -1.13
SYNGAP1-203ENST00000428982 C10orf95Q9H7T3 257 aa8.01□□□□□ -1.13
SYNGAP1-203ENST00000428982 J3QL48 77 aa8□□□□□ -1.13
SYNGAP1-203ENST00000428982 DNAH10Q8IVF4 4471 aa8□□□□□ -1.13
SYNGAP1-203ENST00000428982 COX6B2Q6YFQ2 88 aa7.95□□□□□ -1.14
SYNGAP1-203ENST00000428982 KRTAP13-2Q52LG2 175 aa7.94□□□□□ -1.14
SYNGAP1-203ENST00000428982 RPS29P62273 56 aaKnown RBP7.93□□□□□ -1.14
SYNGAP1-203ENST00000428982 KRTAP15-1Q3LI76 137 aa7.91□□□□□ -1.14
SYNGAP1-203ENST00000428982 TPRXLQ17RH7 258 aa7.89□□□□□ -1.15
SYNGAP1-203ENST00000428982 KMT2AQ03164 3969 aa7.89□□□□□ -1.15
SYNGAP1-203ENST00000428982 SRRM2Q9UQ35 2752 aaKnown RBP7.88□□□□□ -1.15
SYNGAP1-203ENST00000428982 A0A1B0GVY2 172 aa7.88□□□□□ -1.15
SYNGAP1-203ENST00000428982 C9orf92A6NGG3 77 aa7.88□□□□□ -1.15
SYNGAP1-203ENST00000428982 VPS13DQ5THJ4 4388 aa7.87□□□□□ -1.15
SYNGAP1-203ENST00000428982 DNAH2Q9P225 4427 aa7.86□□□□□ -1.15
SYNGAP1-203ENST00000428982 FRAS1Q86XX4 4008 aa7.81□□□□□ -1.16
SYNGAP1-203ENST00000428982 HYDINQ4G0P3 5121 aa7.78□□□□□ -1.16
SYNGAP1-203ENST00000428982 HECTD4Q9Y4D8 3996 aa7.77□□□□□ -1.17
SYNGAP1-203ENST00000428982 KRTAP1-4P0C5Y4 121 aa7.76□□□□□ -1.17
SYNGAP1-203ENST00000428982 DNAH6Q9C0G6 4158 aa7.72□□□□□ -1.17
SYNGAP1-203ENST00000428982 S4R3F8 94 aa7.67□□□□□ -1.18
SYNGAP1-203ENST00000428982 FAT2Q9NYQ8 4349 aa7.65□□□□□ -1.19
SYNGAP1-203ENST00000428982 CAMK2N1Q7Z7J9 78 aa7.64□□□□□ -1.19
SYNGAP1-203ENST00000428982 DNAH11Q96DT5 4516 aa7.64□□□□□ -1.19
SYNGAP1-203ENST00000428982 PKD1P98161 4303 aa7.64□□□□□ -1.19
SYNGAP1-203ENST00000428982 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms