RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 Q96NJ1 140 aa10.12□□□□□ -0.79
COL9A2-204ENST00000427563 C21orf62-AS1Q17RA5 79 aa10.08□□□□□ -0.8
COL9A2-204ENST00000427563 FLGP20930 4061 aaPredicted RBP10.07□□□□□ -0.8
COL9A2-204ENST00000427563 Q75L30 129 aa10.07□□□□□ -0.8
COL9A2-204ENST00000427563 A0A1B0GW54 56 aa10.05□□□□□ -0.8
COL9A2-204ENST00000427563 ETDBQ3ZM63 59 aa10.04□□□□□ -0.8
COL9A2-204ENST00000427563 C20orf166-AS1Q96NR2 134 aa9.99□□□□□ -0.81
COL9A2-204ENST00000427563 LINC00472Q9H8W2 130 aa9.99□□□□□ -0.81
COL9A2-204ENST00000427563 A8MUU9 505 aa9.97□□□□□ -0.81
COL9A2-204ENST00000427563 DSCR10P59022 87 aa9.97□□□□□ -0.81
COL9A2-204ENST00000427563 LCE2DQ5TA82 110 aaPredicted RBP9.96□□□□□ -0.82
COL9A2-204ENST00000427563 ATP11AUNQ6ZP68 121 aa9.96□□□□□ -0.82
COL9A2-204ENST00000427563 IGKV4-1P06312 121 aa9.93□□□□□ -0.82
COL9A2-204ENST00000427563 LORP23490 312 aaPredicted RBP9.93□□□□□ -0.82
COL9A2-204ENST00000427563 DEFB116Q30KQ4 102 aa9.93□□□□□ -0.82
COL9A2-204ENST00000427563 SIGMAR1Q99720 223 aa9.93□□□□□ -0.82
COL9A2-204ENST00000427563 KRTAP16-1A8MUX0 517 aa9.92□□□□□ -0.82
COL9A2-204ENST00000427563 KRTAP10-6P60371 365 aaPredicted RBP9.92□□□□□ -0.82
COL9A2-204ENST00000427563 NOTCH2NLQ7Z3S9 236 aa9.91□□□□□ -0.82
COL9A2-204ENST00000427563 NREPQ16612 68 aa9.9□□□□□ -0.82
COL9A2-204ENST00000427563 COX6B2Q6YFQ2 88 aa9.89□□□□□ -0.83
COL9A2-204ENST00000427563 J3KT08 172 aa9.88□□□□□ -0.83
COL9A2-204ENST00000427563 LINC00846Q9NV44 126 aa9.86□□□□□ -0.83
COL9A2-204ENST00000427563 LINC00313P59037 77 aa9.85□□□□□ -0.83
COL9A2-204ENST00000427563 Q6ZVQ6 151 aa9.85□□□□□ -0.83
COL9A2-204ENST00000427563 FSIP2Q5CZC0 6907 aa9.85□□□□□ -0.83
COL9A2-204ENST00000427563 UBL5Q9BZL1 73 aa9.81□□□□□ -0.84
COL9A2-204ENST00000427563 A0A1B0GVX0 72 aa9.8□□□□□ -0.84
COL9A2-204ENST00000427563 M0R2T5 61 aa9.8□□□□□ -0.84
COL9A2-204ENST00000427563 CRCT1Q9UGL9 99 aa9.8□□□□□ -0.84
COL9A2-204ENST00000427563 A8MWP4 228 aa9.79□□□□□ -0.84
COL9A2-204ENST00000427563 IGHV6-1A0A0B4J1U7 121 aa9.78□□□□□ -0.84
COL9A2-204ENST00000427563 FAM240AA0A1B0GVK7 77 aa9.78□□□□□ -0.84
COL9A2-204ENST00000427563 BPY2O14599 106 aa9.78□□□□□ -0.84
COL9A2-204ENST00000427563 NDUFB1O75438 58 aa9.77□□□□□ -0.85
COL9A2-204ENST00000427563 IGKV3D-7A0A0C4DH55 119 aa9.76□□□□□ -0.85
COL9A2-204ENST00000427563 ACYP1P07311 99 aa9.76□□□□□ -0.85
COL9A2-204ENST00000427563 C8orf87E5RJ46 101 aa9.75□□□□□ -0.85
COL9A2-204ENST00000427563 PRR15Q8IV56 129 aa9.73□□□□□ -0.85
COL9A2-204ENST00000427563 K7EQZ3 153 aa9.71□□□□□ -0.86
COL9A2-204ENST00000427563 C8orf17Q9NRJ1 99 aa9.69□□□□□ -0.86
COL9A2-204ENST00000427563 J3QR89 54 aa9.67□□□□□ -0.86
COL9A2-204ENST00000427563 HRES1P13985 223 aa9.67□□□□□ -0.86
COL9A2-204ENST00000427563 MPLKIPQ8TAP9 179 aa9.67□□□□□ -0.86
COL9A2-204ENST00000427563 Q8N9L7 120 aa9.66□□□□□ -0.86
COL9A2-204ENST00000427563 CXCL6P80162 114 aa9.65□□□□□ -0.86
COL9A2-204ENST00000427563 MMP24-AS1A0A0U1RRL7 71 aa9.64□□□□□ -0.87
COL9A2-204ENST00000427563 KRTAP9-8Q9BYQ0 159 aa9.61□□□□□ -0.87
COL9A2-204ENST00000427563 ATP5EP2Q5VTU8 51 aa9.59□□□□□ -0.87
COL9A2-204ENST00000427563 LINC00643Q86TS7 51 aa9.58□□□□□ -0.88
COL9A2-204ENST00000427563 Q8N9P0 234 aaPredicted RBP9.58□□□□□ -0.88
COL9A2-204ENST00000427563 TMEM254Q8TBM7 123 aa9.58□□□□□ -0.88
COL9A2-204ENST00000427563 ZCCHC13Q8WW36 166 aaKnown RBP9.58□□□□□ -0.88
COL9A2-204ENST00000427563 hDV103S1A0JD37 113 aa9.57□□□□□ -0.88
COL9A2-204ENST00000427563 MRPL34Q9BQ48 92 aaKnown RBP9.55□□□□□ -0.88
COL9A2-204ENST00000427563 WFDC13Q8IUB5 93 aa9.54□□□□□ -0.88
COL9A2-204ENST00000427563 K7ERU9 68 aa9.53□□□□□ -0.88
COL9A2-204ENST00000427563 FAM236DA0A1B0GTK5 79 aa9.52□□□□□ -0.89
COL9A2-204ENST00000427563 HCG22E2RYF7 251 aa9.52□□□□□ -0.89
COL9A2-204ENST00000427563 FAM236CP0DP71 79 aa9.52□□□□□ -0.89
COL9A2-204ENST00000427563 CASC2Q6XLA1 102 aa9.52□□□□□ -0.89
COL9A2-204ENST00000427563 RBM12B-AS1Q9P1G2 102 aa9.51□□□□□ -0.89
COL9A2-204ENST00000427563 SPINK7P58062 85 aa9.49□□□□□ -0.89
COL9A2-204ENST00000427563 MT2AP02795 61 aa9.46□□□□□ -0.9
COL9A2-204ENST00000427563 HIST1H4AP62805 103 aaKnown RBP9.45□□□□□ -0.9
COL9A2-204ENST00000427563 NDUFS5O43920 106 aa9.44□□□□□ -0.9
COL9A2-204ENST00000427563 MT1FP04733 61 aa9.4□□□□□ -0.9
COL9A2-204ENST00000427563 A0A087WVE0 104 aa9.39□□□□□ -0.91
COL9A2-204ENST00000427563 USH2AO75445 5202 aa9.38□□□□□ -0.91
COL9A2-204ENST00000427563 SSPOA2VEC9 5147 aa9.33□□□□□ -0.92
COL9A2-204ENST00000427563 MT-ATP8P03928 68 aa9.33□□□□□ -0.92
COL9A2-204ENST00000427563 Q5W150 140 aa9.32□□□□□ -0.92
COL9A2-204ENST00000427563 KRTAP9-3Q9BYQ3 159 aa9.3□□□□□ -0.92
COL9A2-204ENST00000427563 TP53AIP1Q9HCN2 124 aa9.3□□□□□ -0.92
COL9A2-204ENST00000427563 LCE2BO14633 110 aa9.28□□□□□ -0.92
COL9A2-204ENST00000427563 IMUPQ9GZP8 106 aa9.28□□□□□ -0.92
COL9A2-204ENST00000427563 KRTAP10-10P60014 251 aa9.25□□□□□ -0.93
COL9A2-204ENST00000427563 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.19□□□□□ -0.94
COL9A2-204ENST00000427563 UQCRQO14949 82 aa9.19□□□□□ -0.94
COL9A2-204ENST00000427563 IGKV2D-30A0A075B6S6 120 aa9.18□□□□□ -0.94
COL9A2-204ENST00000427563 IGKV2-30P06310 120 aa9.18□□□□□ -0.94
COL9A2-204ENST00000427563 C7orf65Q6ZTY9 151 aa9.18□□□□□ -0.94
COL9A2-204ENST00000427563 OCR1Q9BZK8 76 aa9.17□□□□□ -0.94
COL9A2-204ENST00000427563 TRAV22A0A0B4J277 110 aa9.16□□□□□ -0.94
COL9A2-204ENST00000427563 H1FX-AS1Q4G0G2 97 aa9.14□□□□□ -0.95
COL9A2-204ENST00000427563 SCGB1A1P11684 91 aa9.13□□□□□ -0.95
COL9A2-204ENST00000427563 KRTAP9-7A8MTY7 169 aa9.12□□□□□ -0.95
COL9A2-204ENST00000427563 FAM236AA0A1B0GUQ0 79 aa9.11□□□□□ -0.95
COL9A2-204ENST00000427563 FAM236BA0A1B0GV22 79 aa9.11□□□□□ -0.95
COL9A2-204ENST00000427563 H0Y9P7 68 aa9.1□□□□□ -0.95
COL9A2-204ENST00000427563 FCGBPQ9Y6R7 5405 aaPredicted RBP9.08□□□□□ -0.96
COL9A2-204ENST00000427563 KRTAP19-1Q8IUB9 90 aa9.08□□□□□ -0.96
COL9A2-204ENST00000427563 ATOX1O00244 68 aa9.07□□□□□ -0.96
COL9A2-204ENST00000427563 LOC101927531A0A1B0GV80 90 aa9.05□□□□□ -0.96
COL9A2-204ENST00000427563 C4orf26Q17RF5 130 aa9.04□□□□□ -0.96
COL9A2-204ENST00000427563 CYP4F30PQ9H0H9 118 aa9.04□□□□□ -0.96
COL9A2-204ENST00000427563 C5orf47Q569G3 176 aa9.02□□□□□ -0.97
COL9A2-204ENST00000427563 MP68P56378 58 aa9.01□□□□□ -0.97
COL9A2-204ENST00000427563 SMIM20Q8N5G0 67 aa9□□□□□ -0.97
COL9A2-204ENST00000427563 C1orf64Q8NEQ6 169 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 279.9 ms