RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 MMP24-AS1A0A0U1RRL7 71 aa8.08□□□□□ -1.12
USP42-203ENST00000426246 C8orf17Q9NRJ1 99 aa8.08□□□□□ -1.12
USP42-203ENST00000426246 DMBT1Q9UGM3 2413 aaPredicted RBP8.07□□□□□ -1.12
USP42-203ENST00000426246 WWC2-AS2Q96NR7 200 aa8.07□□□□□ -1.12
USP42-203ENST00000426246 PRR26Q8N8Z3 221 aa8.06□□□□□ -1.12
USP42-203ENST00000426246 ZCCHC13Q8WW36 166 aaKnown RBP8.06□□□□□ -1.12
USP42-203ENST00000426246 SPACA4Q8TDM5 124 aa8.05□□□□□ -1.12
USP42-203ENST00000426246 C1orf134Q5TEV5 83 aa8.04□□□□□ -1.12
USP42-203ENST00000426246 KRTAP29-1A8MX34 341 aaPredicted RBP8.04□□□□□ -1.12
USP42-203ENST00000426246 SPINK1P00995 79 aa8.04□□□□□ -1.12
USP42-203ENST00000426246 CD164Q04900 197 aa8.03□□□□□ -1.12
USP42-203ENST00000426246 IGKV2D-30A0A075B6S6 120 aa8.02□□□□□ -1.13
USP42-203ENST00000426246 IGKV2-30P06310 120 aa8.02□□□□□ -1.13
USP42-203ENST00000426246 IGLV8-61A0A075B6I0 122 aa8.01□□□□□ -1.13
USP42-203ENST00000426246 A0A1B0GVX0 72 aa8□□□□□ -1.13
USP42-203ENST00000426246 ZNF861PO60384 105 aa7.99□□□□□ -1.13
USP42-203ENST00000426246 MRPL34Q9BQ48 92 aaKnown RBP7.99□□□□□ -1.13
USP42-203ENST00000426246 ZNF706Q9Y5V0 76 aaPredicted RBP7.99□□□□□ -1.13
USP42-203ENST00000426246 Q8N9P0 234 aaPredicted RBP7.98□□□□□ -1.13
USP42-203ENST00000426246 PKHD1P08F94 4074 aa7.97□□□□□ -1.13
USP42-203ENST00000426246 Q5VV11 94 aa7.96□□□□□ -1.13
USP42-203ENST00000426246 Q1T7F1 81 aa7.96□□□□□ -1.14
USP42-203ENST00000426246 C4orf48Q5BLP8 95 aa7.95□□□□□ -1.14
USP42-203ENST00000426246 KMT2CQ8NEZ4 4911 aaKnown RBP7.95□□□□□ -1.14
USP42-203ENST00000426246 Q5W150 140 aa7.94□□□□□ -1.14
USP42-203ENST00000426246 CYP4F30PQ9H0H9 118 aa7.94□□□□□ -1.14
USP42-203ENST00000426246 LCE6AA0A183 80 aa7.93□□□□□ -1.14
USP42-203ENST00000426246 KRTAP10-2P60368 255 aa7.93□□□□□ -1.14
USP42-203ENST00000426246 RYR2Q92736 4967 aa7.93□□□□□ -1.14
USP42-203ENST00000426246 SMR3BP02814 79 aaPredicted RBP7.92□□□□□ -1.14
USP42-203ENST00000426246 SPRR1BP22528 89 aa7.92□□□□□ -1.14
USP42-203ENST00000426246 LIMD2Q9BT23 127 aa7.91□□□□□ -1.14
USP42-203ENST00000426246 FLG2Q5D862 2391 aaPredicted RBP7.91□□□□□ -1.14
USP42-203ENST00000426246 IGLV7-43P04211 117 aa7.91□□□□□ -1.14
USP42-203ENST00000426246 Q96NJ1 140 aa7.91□□□□□ -1.14
USP42-203ENST00000426246 LRP1BQ9NZR2 4599 aa7.9□□□□□ -1.14
USP42-203ENST00000426246 HRES1P13985 223 aa7.89□□□□□ -1.15
USP42-203ENST00000426246 TP53AIP1Q9HCN2 124 aa7.89□□□□□ -1.15
USP42-203ENST00000426246 LINC00313P59037 77 aa7.88□□□□□ -1.15
USP42-203ENST00000426246 SPINK7P58062 85 aa7.88□□□□□ -1.15
USP42-203ENST00000426246 KRTAP13-1Q8IUC0 172 aa7.87□□□□□ -1.15
USP42-203ENST00000426246 IGLV7-46A0A075B6I9 117 aa7.86□□□□□ -1.15
USP42-203ENST00000426246 H3BPC8 53 aa7.86□□□□□ -1.15
USP42-203ENST00000426246 PLAC8Q9NZF1 115 aa7.85□□□□□ -1.15
USP42-203ENST00000426246 SPANXA2-OT1Q8N9U9 137 aa7.84□□□□□ -1.15
USP42-203ENST00000426246 LOC101927531A0A1B0GV80 90 aa7.84□□□□□ -1.15
USP42-203ENST00000426246 LCA10Q71F78 164 aa7.84□□□□□ -1.15
USP42-203ENST00000426246 VPS13BQ7Z7G8 4022 aa7.83□□□□□ -1.16
USP42-203ENST00000426246 PLA2G1BP04054 148 aaKnown RBP7.83□□□□□ -1.16
USP42-203ENST00000426246 Q8N1X5 172 aa7.81□□□□□ -1.16
USP42-203ENST00000426246 C9orf92A6NGG3 77 aa7.8□□□□□ -1.16
USP42-203ENST00000426246 Q6ZSA8 131 aa7.79□□□□□ -1.16
USP42-203ENST00000426246 DYNC1H1Q14204 4646 aaKnown RBP7.79□□□□□ -1.16
USP42-203ENST00000426246 C7orf65Q6ZTY9 151 aa7.78□□□□□ -1.16
USP42-203ENST00000426246 RYR3Q15413 4870 aa7.77□□□□□ -1.16
USP42-203ENST00000426246 KRTAP10-1P60331 282 aa7.77□□□□□ -1.17
USP42-203ENST00000426246 A0A1B0GU69 56 aa7.76□□□□□ -1.17
USP42-203ENST00000426246 ACYP2P14621 99 aa7.76□□□□□ -1.17
USP42-203ENST00000426246 PRAC1Q96KF2 57 aa7.76□□□□□ -1.17
USP42-203ENST00000426246 TYMSOSQ8TAI1 123 aa7.76□□□□□ -1.17
USP42-203ENST00000426246 LINC00483Q53H64 154 aa7.74□□□□□ -1.17
USP42-203ENST00000426246 APOBP04114 4563 aaKnown RBP7.74□□□□□ -1.17
USP42-203ENST00000426246 KRTAP13-2Q52LG2 175 aa7.7□□□□□ -1.18
USP42-203ENST00000426246 Q75L30 129 aa7.68□□□□□ -1.18
USP42-203ENST00000426246 SSBP3-AS1Q7Z2R9 100 aa7.68□□□□□ -1.18
USP42-203ENST00000426246 RBM12B-AS1Q9P1G2 102 aa7.68□□□□□ -1.18
USP42-203ENST00000426246 A0A1B0GVY2 172 aa7.68□□□□□ -1.18
USP42-203ENST00000426246 FAM229AH3BQW9 127 aa7.68□□□□□ -1.18
USP42-203ENST00000426246 ATP11AUNQ6ZP68 121 aa7.67□□□□□ -1.18
USP42-203ENST00000426246 CDC42SE1Q9NRR8 79 aa7.65□□□□□ -1.18
USP42-203ENST00000426246 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.18
USP42-203ENST00000426246 ADM2Q7Z4H4 148 aa7.64□□□□□ -1.19
USP42-203ENST00000426246 KTN1-AS1Q86SY8 53 aa7.63□□□□□ -1.19
USP42-203ENST00000426246 FAT1Q14517 4588 aa7.62□□□□□ -1.19
USP42-203ENST00000426246 C8orf87E5RJ46 101 aa7.6□□□□□ -1.19
USP42-203ENST00000426246 ASB16-AS1Q495Z4 193 aa7.57□□□□□ -1.2
USP42-203ENST00000426246 MIR22HGQ0VDD5 57 aa7.55□□□□□ -1.2
USP42-203ENST00000426246 LINC00304Q8N9R0 145 aa7.55□□□□□ -1.2
USP42-203ENST00000426246 PKHD1L1Q86WI1 4243 aa7.53□□□□□ -1.2
USP42-203ENST00000426246 HSPG2P98160 4391 aa7.52□□□□□ -1.21
USP42-203ENST00000426246 CRIPTQ9P021 101 aa7.52□□□□□ -1.21
USP42-203ENST00000426246 KRTAP1-4P0C5Y4 121 aa7.51□□□□□ -1.21
USP42-203ENST00000426246 UQCR11O14957 56 aa7.5□□□□□ -1.21
USP42-203ENST00000426246 KRTAP10-4P60372 401 aaPredicted RBP7.5□□□□□ -1.21
USP42-203ENST00000426246 DMAC1Q96GE9 116 aa7.5□□□□□ -1.21
USP42-203ENST00000426246 A6NN06 94 aa7.48□□□□□ -1.21
USP42-203ENST00000426246 EPPK1P58107 5090 aaKnown RBP7.47□□□□□ -1.21
USP42-203ENST00000426246 RYR1P21817 5038 aa7.46□□□□□ -1.21
USP42-203ENST00000426246 KRTAP13-3Q3SY46 172 aa7.43□□□□□ -1.22
USP42-203ENST00000426246 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
USP42-203ENST00000426246 KIAA1109Q2LD37 5005 aa7.38□□□□□ -1.23
USP42-203ENST00000426246 A0A0D9SG42 100 aa7.37□□□□□ -1.23
USP42-203ENST00000426246 TNXBP22105 4242 aa7.37□□□□□ -1.23
USP42-203ENST00000426246 KRTAP16-1A8MUX0 517 aa7.37□□□□□ -1.23
USP42-203ENST00000426246 CSAG1Q6PB30 78 aa7.37□□□□□ -1.23
USP42-203ENST00000426246 LRP1Q07954 4544 aaKnown RBP7.36□□□□□ -1.23
USP42-203ENST00000426246 KRTAP17-1Q9BYP8 105 aa7.34□□□□□ -1.23
USP42-203ENST00000426246 MYCBP2O75592 4640 aa7.33□□□□□ -1.24
USP42-203ENST00000426246 FAT3Q8TDW7 4589 aa7.31□□□□□ -1.24
USP42-203ENST00000426246 H3BS24 57 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms