RNA–Protein interactions for RNA: ENST00000425388.1

LINC00501-201, long intergenic non-protein coding RNA 501, humanhuman

TSL 2 BASIC

Gene LINC00501, Length 2,046 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00501-201ENST00000425388 KRTAP24-1Q3LI83 254 aa4.87□□□□□ -1.63
LINC00501-201ENST00000425388 KRTAP13-3Q3SY46 172 aa4.87□□□□□ -1.63
LINC00501-201ENST00000425388 TEP1Q99973 2627 aaKnown RBP4.86□□□□□ -1.63
LINC00501-201ENST00000425388 A8MUU9 505 aa4.85□□□□□ -1.63
LINC00501-201ENST00000425388 DNAH10OSP0CZ25 163 aa4.83□□□□□ -1.64
LINC00501-201ENST00000425388 LINC00483Q53H64 154 aa4.83□□□□□ -1.64
LINC00501-201ENST00000425388 TENM2Q9NT68 2774 aa4.83□□□□□ -1.64
LINC00501-201ENST00000425388 ATRQ13535 2644 aa4.83□□□□□ -1.64
LINC00501-201ENST00000425388 CUBNO60494 3623 aa4.82□□□□□ -1.64
LINC00501-201ENST00000425388 P0C880 135 aa4.82□□□□□ -1.64
LINC00501-201ENST00000425388 Q8N1X5 172 aa4.82□□□□□ -1.64
LINC00501-201ENST00000425388 Q5W150 140 aa4.81□□□□□ -1.64
LINC00501-201ENST00000425388 NIPBLQ6KC79 2804 aaeCLIP4.81□□□□□ -1.64
LINC00501-201ENST00000425388 TENM1Q9UKZ4 2725 aa4.8□□□□□ -1.64
LINC00501-201ENST00000425388 NBEAL2Q6ZNJ1 2754 aa4.8□□□□□ -1.64
LINC00501-201ENST00000425388 K7EIL1 84 aa4.79□□□□□ -1.64
LINC00501-201ENST00000425388 LY6G6CO95867 125 aa4.79□□□□□ -1.64
LINC00501-201ENST00000425388 LINC00304Q8N9R0 145 aa4.79□□□□□ -1.64
LINC00501-201ENST00000425388 A0A096LNI7 61 aa4.77□□□□□ -1.65
LINC00501-201ENST00000425388 VWFP04275 2813 aa4.77□□□□□ -1.65
LINC00501-201ENST00000425388 KRTAP10-11P60412 298 aa4.77□□□□□ -1.65
LINC00501-201ENST00000425388 IGKV2-30P06310 120 aa4.76□□□□□ -1.65
LINC00501-201ENST00000425388 NUPR2A6NF83 97 aa4.73□□□□□ -1.65
LINC00501-201ENST00000425388 C20orf166-AS1Q96NR2 134 aa4.73□□□□□ -1.65
LINC00501-201ENST00000425388 FBN1P35555 2871 aaKnown RBP4.73□□□□□ -1.65
LINC00501-201ENST00000425388 KRTAP13-1Q8IUC0 172 aa4.72□□□□□ -1.65
LINC00501-201ENST00000425388 STAB1Q9NY15 2570 aa4.71□□□□□ -1.65
LINC00501-201ENST00000425388 H0YAA0 97 aa4.7□□□□□ -1.66
LINC00501-201ENST00000425388 DNHD1Q96M86 4753 aa4.7□□□□□ -1.66
LINC00501-201ENST00000425388 COL6A5A8TX70 2615 aa4.7□□□□□ -1.66
LINC00501-201ENST00000425388 PANO1I0J062 215 aa4.7□□□□□ -1.66
LINC00501-201ENST00000425388 IGKV2D-30A0A075B6S6 120 aa4.69□□□□□ -1.66
LINC00501-201ENST00000425388 KRTAP11-1Q8IUC1 163 aa4.69□□□□□ -1.66
LINC00501-201ENST00000425388 ANAPC11Q9NYG5 84 aa4.68□□□□□ -1.66
LINC00501-201ENST00000425388 Q6ZSA8 131 aa4.68□□□□□ -1.66
LINC00501-201ENST00000425388 SPINT4Q6UDR6 99 aa4.67□□□□□ -1.66
LINC00501-201ENST00000425388 C14orf177Q52M58 125 aa4.66□□□□□ -1.66
LINC00501-201ENST00000425388 SSBP3-AS1Q7Z2R9 100 aa4.65□□□□□ -1.66
LINC00501-201ENST00000425388 A0A087WTM6 91 aa4.65□□□□□ -1.67
LINC00501-201ENST00000425388 NDUFAF8A1L188 74 aa4.65□□□□□ -1.67
LINC00501-201ENST00000425388 TRRAPQ9Y4A5 3859 aa4.64□□□□□ -1.67
LINC00501-201ENST00000425388 PKD1L1Q8TDX9 2849 aa4.64□□□□□ -1.67
LINC00501-201ENST00000425388 A0A1B0GU33 70 aa4.64□□□□□ -1.67
LINC00501-201ENST00000425388 KRTAP21-3Q3LHN1 58 aa4.63□□□□□ -1.67
LINC00501-201ENST00000425388 KRTAP3-1Q9BYR8 98 aa4.63□□□□□ -1.67
LINC00501-201ENST00000425388 PSORS1C2Q9UIG4 136 aa4.63□□□□□ -1.67
LINC00501-201ENST00000425388 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
LINC00501-201ENST00000425388 SPINK6Q6UWN8 80 aa4.62□□□□□ -1.67
LINC00501-201ENST00000425388 H1FX-AS1Q4G0G2 97 aa4.61□□□□□ -1.67
LINC00501-201ENST00000425388 DNAH1Q9P2D7 4330 aa4.61□□□□□ -1.67
LINC00501-201ENST00000425388 ANK2Q01484 3957 aa4.61□□□□□ -1.67
LINC00501-201ENST00000425388 NBEAL1Q6ZS30 2694 aa4.6□□□□□ -1.67
LINC00501-201ENST00000425388 DNAH3Q8TD57 4116 aa4.6□□□□□ -1.67
LINC00501-201ENST00000425388 NOTCH1P46531 2555 aa4.6□□□□□ -1.67
LINC00501-201ENST00000425388 MGAM2Q2M2H8 2515 aa4.59□□□□□ -1.67
LINC00501-201ENST00000425388 SRRM2Q9UQ35 2752 aaKnown RBP4.57□□□□□ -1.68
LINC00501-201ENST00000425388 SPINK1P00995 79 aa4.57□□□□□ -1.68
LINC00501-201ENST00000425388 CMYA5Q8N3K9 4069 aa4.57□□□□□ -1.68
LINC00501-201ENST00000425388 CRIPTQ9P021 101 aa4.56□□□□□ -1.68
LINC00501-201ENST00000425388 FBN3Q75N90 2809 aa4.56□□□□□ -1.68
LINC00501-201ENST00000425388 TENM3Q9P273 2699 aa4.55□□□□□ -1.68
LINC00501-201ENST00000425388 TYMSOSQ8TAI1 123 aa4.52□□□□□ -1.69
LINC00501-201ENST00000425388 CSMD3Q7Z407 3707 aa4.5□□□□□ -1.69
LINC00501-201ENST00000425388 APLNQ9ULZ1 77 aa4.5□□□□□ -1.69
LINC00501-201ENST00000425388 TPRXLQ17RH7 258 aa4.5□□□□□ -1.69
LINC00501-201ENST00000425388 COX6B2Q6YFQ2 88 aa4.5□□□□□ -1.69
LINC00501-201ENST00000425388 SPACA4Q8TDM5 124 aa4.49□□□□□ -1.69
LINC00501-201ENST00000425388 FLG2Q5D862 2391 aaPredicted RBP4.49□□□□□ -1.69
LINC00501-201ENST00000425388 RPL37P61927 97 aaKnown RBP4.48□□□□□ -1.69
LINC00501-201ENST00000425388 STAB2Q8WWQ8 2551 aa4.47□□□□□ -1.69
LINC00501-201ENST00000425388 NBDYA0A0U1RRE5 68 aa4.46□□□□□ -1.69
LINC00501-201ENST00000425388 UBE2DNLQ8IWF7 75 aa4.46□□□□□ -1.7
LINC00501-201ENST00000425388 KRTAP1-5Q9BYS1 174 aa4.46□□□□□ -1.7
LINC00501-201ENST00000425388 HUWE1Q7Z6Z7 4374 aaKnown RBP4.45□□□□□ -1.7
LINC00501-201ENST00000425388 MEGF8Q7Z7M0 2845 aa4.43□□□□□ -1.7
LINC00501-201ENST00000425388 COL7A1Q02388 2944 aa4.43□□□□□ -1.7
LINC00501-201ENST00000425388 DNAH9Q9NYC9 4486 aa4.4□□□□□ -1.7
LINC00501-201ENST00000425388 LYSTQ99698 3801 aa4.4□□□□□ -1.71
LINC00501-201ENST00000425388 Q6ZRN7 208 aaPredicted RBP4.38□□□□□ -1.71
LINC00501-201ENST00000425388 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
LINC00501-201ENST00000425388 DYNC2H1Q8NCM8 4307 aaKnown RBP4.36□□□□□ -1.71
LINC00501-201ENST00000425388 DNAH10Q8IVF4 4471 aa4.36□□□□□ -1.71
LINC00501-201ENST00000425388 PRKDCP78527 4128 aaKnown RBP4.33□□□□□ -1.72
LINC00501-201ENST00000425388 DNAH8Q96JB1 4490 aa4.32□□□□□ -1.72
LINC00501-201ENST00000425388 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
LINC00501-201ENST00000425388 FRAS1Q86XX4 4008 aa4.32□□□□□ -1.72
LINC00501-201ENST00000425388 TGP01266 2768 aa4.3□□□□□ -1.72
LINC00501-201ENST00000425388 DNAH7Q8WXX0 4024 aa4.29□□□□□ -1.72
LINC00501-201ENST00000425388 R4GN34 69 aa4.29□□□□□ -1.72
LINC00501-201ENST00000425388 KRTAP13-2Q52LG2 175 aa4.27□□□□□ -1.73
LINC00501-201ENST00000425388 XP32Q5T750 250 aa4.26□□□□□ -1.73
LINC00501-201ENST00000425388 S4R3F8 94 aa4.26□□□□□ -1.73
LINC00501-201ENST00000425388 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
LINC00501-201ENST00000425388 VPS13DQ5THJ4 4388 aa4.25□□□□□ -1.73
LINC00501-201ENST00000425388 A0A0D9SG42 100 aa4.25□□□□□ -1.73
LINC00501-201ENST00000425388 KRTAP13-4Q3LI77 160 aa4.23□□□□□ -1.73
LINC00501-201ENST00000425388 RPS29P62273 56 aaKnown RBP4.22□□□□□ -1.73
LINC00501-201ENST00000425388 DNAH6Q9C0G6 4158 aa4.21□□□□□ -1.74
LINC00501-201ENST00000425388 STARD9Q9P2P6 4700 aa4.2□□□□□ -1.74
LINC00501-201ENST00000425388 PLECQ15149 4684 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms