RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 C9orf92A6NGG3 77 aa7.54□□□□□ -1.2
CPNE1-209ENST00000415920 TPRXLQ17RH7 258 aa7.54□□□□□ -1.2
CPNE1-209ENST00000415920 Q6ZVQ6 151 aa7.54□□□□□ -1.2
CPNE1-209ENST00000415920 LINC00846Q9NV44 126 aa7.54□□□□□ -1.2
CPNE1-209ENST00000415920 UBL5Q9BZL1 73 aa7.53□□□□□ -1.2
CPNE1-209ENST00000415920 J3KT08 172 aa7.52□□□□□ -1.21
CPNE1-209ENST00000415920 KRTAP13-3Q3SY46 172 aa7.52□□□□□ -1.21
CPNE1-209ENST00000415920 CDIP1Q9H305 208 aa7.52□□□□□ -1.21
CPNE1-209ENST00000415920 FAM240AA0A1B0GVK7 77 aa7.49□□□□□ -1.21
CPNE1-209ENST00000415920 BPY2O14599 106 aa7.48□□□□□ -1.21
CPNE1-209ENST00000415920 IGHV6-1A0A0B4J1U7 121 aa7.47□□□□□ -1.21
CPNE1-209ENST00000415920 ACYP1P07311 99 aa7.47□□□□□ -1.21
CPNE1-209ENST00000415920 A0A1B0GVX0 72 aa7.46□□□□□ -1.22
CPNE1-209ENST00000415920 J3QR89 54 aa7.46□□□□□ -1.22
CPNE1-209ENST00000415920 DSCR10P59022 87 aa7.46□□□□□ -1.22
CPNE1-209ENST00000415920 A8MWP4 228 aa7.45□□□□□ -1.22
CPNE1-209ENST00000415920 NDUFB1O75438 58 aa7.45□□□□□ -1.22
CPNE1-209ENST00000415920 KRTAP4-1Q9BYQ7 146 aa7.44□□□□□ -1.22
CPNE1-209ENST00000415920 K7EQZ3 153 aa7.43□□□□□ -1.22
CPNE1-209ENST00000415920 XP32Q5T750 250 aa7.43□□□□□ -1.22
CPNE1-209ENST00000415920 IGKV3D-7A0A0C4DH55 119 aa7.42□□□□□ -1.22
CPNE1-209ENST00000415920 C8orf87E5RJ46 101 aa7.41□□□□□ -1.22
CPNE1-209ENST00000415920 Q8N9L7 120 aa7.41□□□□□ -1.22
CPNE1-209ENST00000415920 LINC00313P59037 77 aa7.4□□□□□ -1.22
CPNE1-209ENST00000415920 NOTCH2NLQ7Z3S9 236 aa7.39□□□□□ -1.23
CPNE1-209ENST00000415920 PRR15Q8IV56 129 aa7.39□□□□□ -1.23
CPNE1-209ENST00000415920 FSIP2Q5CZC0 6907 aa7.39□□□□□ -1.23
CPNE1-209ENST00000415920 C8orf17Q9NRJ1 99 aa7.38□□□□□ -1.23
CPNE1-209ENST00000415920 K7ERU9 68 aa7.37□□□□□ -1.23
CPNE1-209ENST00000415920 CXCL6P80162 114 aa7.37□□□□□ -1.23
CPNE1-209ENST00000415920 ATP5EP2Q5VTU8 51 aa7.37□□□□□ -1.23
CPNE1-209ENST00000415920 MMP24-AS1A0A0U1RRL7 71 aa7.35□□□□□ -1.23
CPNE1-209ENST00000415920 KRTAP16-1A8MUX0 517 aa7.34□□□□□ -1.23
CPNE1-209ENST00000415920 RPL37P61927 97 aaKnown RBP7.33□□□□□ -1.24
CPNE1-209ENST00000415920 LINC00643Q86TS7 51 aa7.33□□□□□ -1.24
CPNE1-209ENST00000415920 WFDC13Q8IUB5 93 aa7.32□□□□□ -1.24
CPNE1-209ENST00000415920 Q75L30 129 aa7.31□□□□□ -1.24
CPNE1-209ENST00000415920 hDV103S1A0JD37 113 aa7.3□□□□□ -1.24
CPNE1-209ENST00000415920 SEC61BP60468 96 aaKnown RBP7.3□□□□□ -1.24
CPNE1-209ENST00000415920 HIST1H4AP62805 103 aaKnown RBP7.3□□□□□ -1.24
CPNE1-209ENST00000415920 C20orf166-AS1Q96NR2 134 aa7.3□□□□□ -1.24
CPNE1-209ENST00000415920 CRCT1Q9UGL9 99 aa7.3□□□□□ -1.24
CPNE1-209ENST00000415920 A8MUU9 505 aa7.29□□□□□ -1.24
CPNE1-209ENST00000415920 CASC2Q6XLA1 102 aa7.29□□□□□ -1.24
CPNE1-209ENST00000415920 TMEM254Q8TBM7 123 aa7.29□□□□□ -1.24
CPNE1-209ENST00000415920 HCG22E2RYF7 251 aa7.28□□□□□ -1.24
CPNE1-209ENST00000415920 LCE2CQ5TA81 110 aa7.28□□□□□ -1.24
CPNE1-209ENST00000415920 PCOTHQ58A44 107 aa7.27□□□□□ -1.25
CPNE1-209ENST00000415920 MRPL34Q9BQ48 92 aaKnown RBP7.27□□□□□ -1.25
CPNE1-209ENST00000415920 NDUFS5O43920 106 aa7.26□□□□□ -1.25
CPNE1-209ENST00000415920 ATP11AUNQ6ZP68 121 aa7.25□□□□□ -1.25
CPNE1-209ENST00000415920 KRTAP19-2Q3LHN2 52 aa7.24□□□□□ -1.25
CPNE1-209ENST00000415920 A0A087WVE0 104 aa7.23□□□□□ -1.25
CPNE1-209ENST00000415920 Q8N9P0 234 aaPredicted RBP7.23□□□□□ -1.25
CPNE1-209ENST00000415920 MT-ATP8P03928 68 aa7.18□□□□□ -1.26
CPNE1-209ENST00000415920 MT1HP80294 61 aa7.18□□□□□ -1.26
CPNE1-209ENST00000415920 ZCCHC13Q8WW36 166 aaKnown RBP7.18□□□□□ -1.26
CPNE1-209ENST00000415920 LCE2BO14633 110 aa7.17□□□□□ -1.26
CPNE1-209ENST00000415920 IMUPQ9GZP8 106 aa7.1□□□□□ -1.27
CPNE1-209ENST00000415920 LORP23490 312 aaPredicted RBP7.09□□□□□ -1.27
CPNE1-209ENST00000415920 TP53AIP1Q9HCN2 124 aa7.08□□□□□ -1.28
CPNE1-209ENST00000415920 KRTAP10-6P60371 365 aaPredicted RBP7.07□□□□□ -1.28
CPNE1-209ENST00000415920 FAM236AA0A1B0GUQ0 79 aa7.06□□□□□ -1.28
CPNE1-209ENST00000415920 FAM236BA0A1B0GV22 79 aa7.06□□□□□ -1.28
CPNE1-209ENST00000415920 Q5W150 140 aa7.06□□□□□ -1.28
CPNE1-209ENST00000415920 SCGB1A1P11684 91 aa7.04□□□□□ -1.28
CPNE1-209ENST00000415920 IGKV2D-30A0A075B6S6 120 aa7.03□□□□□ -1.28
CPNE1-209ENST00000415920 TRAV22A0A0B4J277 110 aa7.03□□□□□ -1.28
CPNE1-209ENST00000415920 IGKV2-30P06310 120 aa7.03□□□□□ -1.28
CPNE1-209ENST00000415920 FLGP20930 4061 aaPredicted RBP7.01□□□□□ -1.29
CPNE1-209ENST00000415920 UQCRQO14949 82 aa7.01□□□□□ -1.29
CPNE1-209ENST00000415920 SPINK7P58062 85 aa7.01□□□□□ -1.29
CPNE1-209ENST00000415920 C7orf65Q6ZTY9 151 aa7.01□□□□□ -1.29
CPNE1-209ENST00000415920 OCR1Q9BZK8 76 aa6.99□□□□□ -1.29
CPNE1-209ENST00000415920 H0Y9P7 68 aa6.98□□□□□ -1.29
CPNE1-209ENST00000415920 HRES1P13985 223 aa6.96□□□□□ -1.3
CPNE1-209ENST00000415920 M0R2T5 61 aa6.95□□□□□ -1.3
CPNE1-209ENST00000415920 COX6B2Q6YFQ2 88 aa6.95□□□□□ -1.3
CPNE1-209ENST00000415920 SVIPQ8NHG7 77 aa6.95□□□□□ -1.3
CPNE1-209ENST00000415920 ATOX1O00244 68 aa6.94□□□□□ -1.3
CPNE1-209ENST00000415920 FAM236DA0A1B0GTK5 79 aa6.93□□□□□ -1.3
CPNE1-209ENST00000415920 FAM236CP0DP71 79 aa6.93□□□□□ -1.3
CPNE1-209ENST00000415920 MP68P56378 58 aa6.93□□□□□ -1.3
CPNE1-209ENST00000415920 RBM12B-AS1Q9P1G2 102 aa6.93□□□□□ -1.3
CPNE1-209ENST00000415920 LOC101927531A0A1B0GV80 90 aa6.92□□□□□ -1.3
CPNE1-209ENST00000415920 SMIM20Q8N5G0 67 aa6.91□□□□□ -1.3
CPNE1-209ENST00000415920 TRAV7A0A075B6U4 112 aa6.89□□□□□ -1.31
CPNE1-209ENST00000415920 LINC00208Q96KT6 92 aa6.89□□□□□ -1.31
CPNE1-209ENST00000415920 C5orf47Q569G3 176 aa6.88□□□□□ -1.31
CPNE1-209ENST00000415920 C1orf64Q8NEQ6 169 aa6.88□□□□□ -1.31
CPNE1-209ENST00000415920 MPLKIPQ8TAP9 179 aa6.87□□□□□ -1.31
CPNE1-209ENST00000415920 CYP4F30PQ9H0H9 118 aa6.86□□□□□ -1.31
CPNE1-209ENST00000415920 SSPOA2VEC9 5147 aa6.85□□□□□ -1.31
CPNE1-209ENST00000415920 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.84□□□□□ -1.31
CPNE1-209ENST00000415920 C4orf26Q17RF5 130 aa6.84□□□□□ -1.31
CPNE1-209ENST00000415920 USH2AO75445 5202 aa6.84□□□□□ -1.31
CPNE1-209ENST00000415920 H3BPC8 53 aa6.83□□□□□ -1.32
CPNE1-209ENST00000415920 KRTAP9-7A8MTY7 169 aa6.82□□□□□ -1.32
CPNE1-209ENST00000415920 SERP2Q8N6R1 65 aa6.82□□□□□ -1.32
CPNE1-209ENST00000415920 KLKP1Q107X0 134 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms