RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 LINC00158P58513 81 aa3.42□□□□□ -1.86
EPHA4-204ENST00000415749 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
EPHA4-204ENST00000415749 A0A1B0GU33 70 aa3.41□□□□□ -1.86
EPHA4-204ENST00000415749 H0YGX0 51 aa3.41□□□□□ -1.86
EPHA4-204ENST00000415749 ACYP1P07311 99 aa3.41□□□□□ -1.86
EPHA4-204ENST00000415749 COX17Q14061 63 aa3.41□□□□□ -1.86
EPHA4-204ENST00000415749 SPINK6Q6UWN8 80 aa3.41□□□□□ -1.86
EPHA4-204ENST00000415749 SMCR5Q8TEV8 140 aa3.41□□□□□ -1.86
EPHA4-204ENST00000415749 XAGE1AQ9HD64 81 aa3.41□□□□□ -1.86
EPHA4-204ENST00000415749 TOMM7Q9P0U1 55 aa3.41□□□□□ -1.86
EPHA4-204ENST00000415749 SNCGO76070 127 aa3.4□□□□□ -1.87
EPHA4-204ENST00000415749 XCL1P47992 114 aa3.4□□□□□ -1.87
EPHA4-204ENST00000415749 LINC00269Q8N2A0 174 aa3.4□□□□□ -1.87
EPHA4-204ENST00000415749 Q8NDZ9 215 aa3.4□□□□□ -1.87
EPHA4-204ENST00000415749 A0A1B0GX51 115 aa3.39□□□□□ -1.87
EPHA4-204ENST00000415749 ZNF73O43830 326 aaPredicted RBP3.39□□□□□ -1.87
EPHA4-204ENST00000415749 MOBPQ13875 183 aa3.39□□□□□ -1.87
EPHA4-204ENST00000415749 KRTAP26-1Q6PEX3 210 aa3.39□□□□□ -1.87
EPHA4-204ENST00000415749 CLPSL2Q6UWE3 100 aa3.39□□□□□ -1.87
EPHA4-204ENST00000415749 LCA10Q71F78 164 aa3.39□□□□□ -1.87
EPHA4-204ENST00000415749 IMUPQ9GZP8 106 aa3.39□□□□□ -1.87
EPHA4-204ENST00000415749 PLAC8Q9NZF1 115 aa3.39□□□□□ -1.87
EPHA4-204ENST00000415749 GVQW2A0A096LPI5 108 aaPredicted RBP3.38□□□□□ -1.87
EPHA4-204ENST00000415749 HIST1H4AP62805 103 aaKnown RBP3.38□□□□□ -1.87
EPHA4-204ENST00000415749 ENHOQ6UWT2 76 aa3.38□□□□□ -1.87
EPHA4-204ENST00000415749 LINC00643Q86TS7 51 aa3.38□□□□□ -1.87
EPHA4-204ENST00000415749 ANGP03950 147 aaKnown RBP3.37□□□□□ -1.87
EPHA4-204ENST00000415749 C9orf116Q5BN46 136 aaPredicted RBP3.37□□□□□ -1.87
EPHA4-204ENST00000415749 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
EPHA4-204ENST00000415749 SPACA4Q8TDM5 124 aa3.37□□□□□ -1.87
EPHA4-204ENST00000415749 R4GN34 69 aa3.37□□□□□ -1.87
EPHA4-204ENST00000415749 IGLV10-54A0A075B6I4 117 aa3.36□□□□□ -1.87
EPHA4-204ENST00000415749 IGLV6-57P01721 117 aa3.36□□□□□ -1.87
EPHA4-204ENST00000415749 UNQ6190/PRO20217Q6UXQ8 127 aa3.36□□□□□ -1.87
EPHA4-204ENST00000415749 C1orf64Q8NEQ6 169 aa3.36□□□□□ -1.87
EPHA4-204ENST00000415749 TMEM126AQ9H061 195 aa3.36□□□□□ -1.87
EPHA4-204ENST00000415749 H3BPC8 53 aa3.35□□□□□ -1.87
EPHA4-204ENST00000415749 CCDC179H3BU77 68 aa3.35□□□□□ -1.87
EPHA4-204ENST00000415749 CNBPP62633 177 aaKnown RBP3.35□□□□□ -1.87
EPHA4-204ENST00000415749 SPAG11BQ08648 103 aa3.35□□□□□ -1.87
EPHA4-204ENST00000415749 Q6JHZ5 121 aa3.35□□□□□ -1.87
EPHA4-204ENST00000415749 LINC00575Q6W349 94 aa3.35□□□□□ -1.87
EPHA4-204ENST00000415749 ORMDL1Q9P0S3 153 aa3.35□□□□□ -1.87
EPHA4-204ENST00000415749 C6orf48Q9UBA6 75 aa3.35□□□□□ -1.87
EPHA4-204ENST00000415749 PSORS1C2Q9UIG4 136 aa3.35□□□□□ -1.87
EPHA4-204ENST00000415749 NCR3O14931 201 aa3.34□□□□□ -1.87
EPHA4-204ENST00000415749 DNAL4O96015 105 aa3.34□□□□□ -1.87
EPHA4-204ENST00000415749 CCKP06307 115 aa3.34□□□□□ -1.87
EPHA4-204ENST00000415749 C14orf132Q9NPU4 83 aa3.34□□□□□ -1.87
EPHA4-204ENST00000415749 LINC00846Q9NV44 126 aa3.34□□□□□ -1.87
EPHA4-204ENST00000415749 IGKV2-24A0A0C4DH68 120 aa3.33□□□□□ -1.88
EPHA4-204ENST00000415749 LINC00526Q96FQ7 95 aa3.33□□□□□ -1.88
EPHA4-204ENST00000415749 HIGD2AQ9BW72 106 aa3.33□□□□□ -1.88
EPHA4-204ENST00000415749 TRBV7-6A0A0J9YX20 115 aa3.32□□□□□ -1.88
EPHA4-204ENST00000415749 JMJD7-PLA2G4BH0Y9G9 81 aa3.32□□□□□ -1.88
EPHA4-204ENST00000415749 TMEM256-PLSCR3K7ERE1 68 aa3.32□□□□□ -1.88
EPHA4-204ENST00000415749 LINC01554Q52M75 96 aa3.32□□□□□ -1.88
EPHA4-204ENST00000415749 LOC110117498A0A087WWA1 95 aa3.31□□□□□ -1.88
EPHA4-204ENST00000415749 FAM236AA0A1B0GUQ0 79 aa3.31□□□□□ -1.88
EPHA4-204ENST00000415749 FAM236BA0A1B0GV22 79 aa3.31□□□□□ -1.88
EPHA4-204ENST00000415749 Q6ZQT0 140 aa3.31□□□□□ -1.88
EPHA4-204ENST00000415749 TRBV10-3A0A0K0K1G6 114 aa3.3□□□□□ -1.88
EPHA4-204ENST00000415749 hADV29S1A0JD25 119 aa3.3□□□□□ -1.88
EPHA4-204ENST00000415749 HRES1P13985 223 aa3.3□□□□□ -1.88
EPHA4-204ENST00000415749 S100A7L2Q5SY68 101 aa3.3□□□□□ -1.88
EPHA4-204ENST00000415749 TRAV23DV6A0A075B6W5 121 aa3.29□□□□□ -1.88
EPHA4-204ENST00000415749 ELOF1P60002 83 aaKnown RBP3.29□□□□□ -1.88
EPHA4-204ENST00000415749 ATP5EP2Q5VTU8 51 aa3.29□□□□□ -1.88
EPHA4-204ENST00000415749 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.29□□□□□ -1.88
EPHA4-204ENST00000415749 LINC00474Q9P2X8 69 aa3.29□□□□□ -1.88
EPHA4-204ENST00000415749 LAMTOR3Q9UHA4 124 aa3.29□□□□□ -1.88
EPHA4-204ENST00000415749 A0A096LNI7 61 aa3.28□□□□□ -1.88
EPHA4-204ENST00000415749 IGKV3D-7A0A0C4DH55 119 aa3.28□□□□□ -1.88
EPHA4-204ENST00000415749 TRBV7-4A0A0J9YYF1 115 aa3.28□□□□□ -1.88
EPHA4-204ENST00000415749 M0R378 163 aa3.28□□□□□ -1.88
EPHA4-204ENST00000415749 ATOX1O00244 68 aa3.28□□□□□ -1.88
EPHA4-204ENST00000415749 UQCRQO14949 82 aa3.28□□□□□ -1.88
EPHA4-204ENST00000415749 COX7CP15954 63 aa3.28□□□□□ -1.88
EPHA4-204ENST00000415749 DIRC1Q969H9 104 aa3.28□□□□□ -1.88
EPHA4-204ENST00000415749 CRYGAP11844 174 aa3.27□□□□□ -1.89
EPHA4-204ENST00000415749 COX7BP24311 80 aa3.27□□□□□ -1.89
EPHA4-204ENST00000415749 RBM3P98179 157 aaKnown RBP3.27□□□□□ -1.89
EPHA4-204ENST00000415749 Q6ZQY7 126 aa3.27□□□□□ -1.89
EPHA4-204ENST00000415749 TRAV7A0A075B6U4 112 aa3.26□□□□□ -1.89
EPHA4-204ENST00000415749 A0A087WVE0 104 aa3.26□□□□□ -1.89
EPHA4-204ENST00000415749 J3KT08 172 aa3.26□□□□□ -1.89
EPHA4-204ENST00000415749 PDE6GP18545 87 aa3.26□□□□□ -1.89
EPHA4-204ENST00000415749 KCNQ1DNQ9H478 68 aa3.26□□□□□ -1.89
EPHA4-204ENST00000415749 BCE1O60756 84 aa3.25□□□□□ -1.89
EPHA4-204ENST00000415749 SPRR1AP35321 89 aa3.25□□□□□ -1.89
EPHA4-204ENST00000415749 UBE2BP63146 152 aa3.25□□□□□ -1.89
EPHA4-204ENST00000415749 KRTAP13-2Q52LG2 175 aa3.25□□□□□ -1.89
EPHA4-204ENST00000415749 C1orf137Q5JT78 98 aa3.25□□□□□ -1.89
EPHA4-204ENST00000415749 HRCT1Q6UXD1 115 aa3.25□□□□□ -1.89
EPHA4-204ENST00000415749 SERP2Q8N6R1 65 aa3.25□□□□□ -1.89
EPHA4-204ENST00000415749 CYSTM1Q9H1C7 97 aa3.25□□□□□ -1.89
EPHA4-204ENST00000415749 MUC17Q685J3 4493 aa3.25□□□□□ -1.89
EPHA4-204ENST00000415749 A0A1W2PNN7 141 aa3.24□□□□□ -1.89
EPHA4-204ENST00000415749 C9orf153Q5TBE3 101 aa3.24□□□□□ -1.89
EPHA4-204ENST00000415749 IGLV5-48A0A075B6I7 105 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms