RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 DNAH9Q9NYC9 4486 aa7.54□□□□□ -1.2
HERC3-203ENST00000407637 KRTAP13-1Q8IUC0 172 aa7.53□□□□□ -1.2
HERC3-203ENST00000407637 SPINK6Q6UWN8 80 aa7.52□□□□□ -1.21
HERC3-203ENST00000407637 J3QL48 77 aa7.5□□□□□ -1.21
HERC3-203ENST00000407637 KRTAP10-11P60412 298 aa7.5□□□□□ -1.21
HERC3-203ENST00000407637 MAST4O15021 2626 aa7.5□□□□□ -1.21
HERC3-203ENST00000407637 KRTAP1-5Q9BYS1 174 aa7.48□□□□□ -1.21
HERC3-203ENST00000407637 NOTCH1P46531 2555 aa7.48□□□□□ -1.21
HERC3-203ENST00000407637 ROMO1P60602 79 aa7.47□□□□□ -1.21
HERC3-203ENST00000407637 ANAPC11Q9NYG5 84 aa7.46□□□□□ -1.22
HERC3-203ENST00000407637 FRAS1Q86XX4 4008 aa7.46□□□□□ -1.22
HERC3-203ENST00000407637 NSD1Q96L73 2696 aaPredicted RBP7.46□□□□□ -1.22
HERC3-203ENST00000407637 PANO1I0J062 215 aa7.46□□□□□ -1.22
HERC3-203ENST00000407637 LINC00483Q53H64 154 aa7.45□□□□□ -1.22
HERC3-203ENST00000407637 WWC2-AS2Q96NR7 200 aa7.45□□□□□ -1.22
HERC3-203ENST00000407637 COL6A5A8TX70 2615 aa7.44□□□□□ -1.22
HERC3-203ENST00000407637 IGLV7-43P04211 117 aa7.43□□□□□ -1.22
HERC3-203ENST00000407637 KRTAP25-1Q3LHN0 102 aa7.43□□□□□ -1.22
HERC3-203ENST00000407637 DNAH8Q96JB1 4490 aa7.41□□□□□ -1.22
HERC3-203ENST00000407637 IGKV2-30P06310 120 aa7.41□□□□□ -1.22
HERC3-203ENST00000407637 CMYA5Q8N3K9 4069 aa7.41□□□□□ -1.22
HERC3-203ENST00000407637 FAM229AH3BQW9 127 aa7.38□□□□□ -1.23
HERC3-203ENST00000407637 A8MUU9 505 aa7.37□□□□□ -1.23
HERC3-203ENST00000407637 INAFM1C9JVW0 142 aa7.36□□□□□ -1.23
HERC3-203ENST00000407637 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
HERC3-203ENST00000407637 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
HERC3-203ENST00000407637 MEGF8Q7Z7M0 2845 aa7.36□□□□□ -1.23
HERC3-203ENST00000407637 HUWE1Q7Z6Z7 4374 aaKnown RBP7.35□□□□□ -1.23
HERC3-203ENST00000407637 IGLV5-52A0A0A0MRZ9 124 aa7.35□□□□□ -1.23
HERC3-203ENST00000407637 C14orf177Q52M58 125 aa7.35□□□□□ -1.23
HERC3-203ENST00000407637 LINC00304Q8N9R0 145 aa7.33□□□□□ -1.24
HERC3-203ENST00000407637 FLG2Q5D862 2391 aaPredicted RBP7.33□□□□□ -1.24
HERC3-203ENST00000407637 SPINK1P00995 79 aa7.33□□□□□ -1.24
HERC3-203ENST00000407637 DNAH3Q8TD57 4116 aa7.33□□□□□ -1.24
HERC3-203ENST00000407637 IGKV2D-30A0A075B6S6 120 aa7.32□□□□□ -1.24
HERC3-203ENST00000407637 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.32□□□□□ -1.24
HERC3-203ENST00000407637 H0YAA0 97 aa7.31□□□□□ -1.24
HERC3-203ENST00000407637 DNAH7Q8WXX0 4024 aa7.31□□□□□ -1.24
HERC3-203ENST00000407637 P0C880 135 aa7.31□□□□□ -1.24
HERC3-203ENST00000407637 CIRBP-AS1Q8TBR5 109 aa7.31□□□□□ -1.24
HERC3-203ENST00000407637 LCE2DQ5TA82 110 aaPredicted RBP7.28□□□□□ -1.24
HERC3-203ENST00000407637 CRIPTQ9P021 101 aa7.28□□□□□ -1.24
HERC3-203ENST00000407637 PSORS1C2Q9UIG4 136 aa7.28□□□□□ -1.24
HERC3-203ENST00000407637 STAB1Q9NY15 2570 aa7.28□□□□□ -1.24
HERC3-203ENST00000407637 SPACA4Q8TDM5 124 aa7.27□□□□□ -1.25
HERC3-203ENST00000407637 Q6ZSA8 131 aa7.27□□□□□ -1.25
HERC3-203ENST00000407637 LY6G6CO95867 125 aa7.26□□□□□ -1.25
HERC3-203ENST00000407637 UBE2DNLQ8IWF7 75 aa7.26□□□□□ -1.25
HERC3-203ENST00000407637 DNAH17Q9UFH2 4485 aa7.26□□□□□ -1.25
HERC3-203ENST00000407637 STAB2Q8WWQ8 2551 aa7.25□□□□□ -1.25
HERC3-203ENST00000407637 TGP01266 2768 aa7.24□□□□□ -1.25
HERC3-203ENST00000407637 Q8N1X5 172 aa7.21□□□□□ -1.25
HERC3-203ENST00000407637 HECTD4Q9Y4D8 3996 aa7.2□□□□□ -1.26
HERC3-203ENST00000407637 KRTAP16-1A8MUX0 517 aa7.2□□□□□ -1.26
HERC3-203ENST00000407637 TYMSOSQ8TAI1 123 aa7.18□□□□□ -1.26
HERC3-203ENST00000407637 VPS13DQ5THJ4 4388 aa7.15□□□□□ -1.26
HERC3-203ENST00000407637 SSBP3-AS1Q7Z2R9 100 aa7.14□□□□□ -1.27
HERC3-203ENST00000407637 PLECQ15149 4684 aaKnown RBP7.14□□□□□ -1.27
HERC3-203ENST00000407637 A0A1B0GU33 70 aa7.14□□□□□ -1.27
HERC3-203ENST00000407637 Q6ZRN7 208 aaPredicted RBP7.12□□□□□ -1.27
HERC3-203ENST00000407637 APLNQ9ULZ1 77 aa7.1□□□□□ -1.27
HERC3-203ENST00000407637 H1FX-AS1Q4G0G2 97 aa7.1□□□□□ -1.27
HERC3-203ENST00000407637 DYNC2H1Q8NCM8 4307 aaKnown RBP7.09□□□□□ -1.27
HERC3-203ENST00000407637 NBDYA0A0U1RRE5 68 aa7.09□□□□□ -1.27
HERC3-203ENST00000407637 SPINT4Q6UDR6 99 aa7.06□□□□□ -1.28
HERC3-203ENST00000407637 KMT2AQ03164 3969 aa7.05□□□□□ -1.28
HERC3-203ENST00000407637 MGAM2Q2M2H8 2515 aa7.04□□□□□ -1.28
HERC3-203ENST00000407637 K7ERS5 55 aa7.03□□□□□ -1.28
HERC3-203ENST00000407637 KRTAP24-1Q3LI83 254 aa7.03□□□□□ -1.28
HERC3-203ENST00000407637 A0A087WTM6 91 aa7.03□□□□□ -1.28
HERC3-203ENST00000407637 NDUFAF8A1L188 74 aa7.02□□□□□ -1.29
HERC3-203ENST00000407637 KRTAP13-2Q52LG2 175 aa7□□□□□ -1.29
HERC3-203ENST00000407637 DNAH2Q9P225 4427 aa6.99□□□□□ -1.29
HERC3-203ENST00000407637 NUPR2A6NF83 97 aa6.97□□□□□ -1.29
HERC3-203ENST00000407637 DNAH11Q96DT5 4516 aa6.97□□□□□ -1.29
HERC3-203ENST00000407637 FBN3Q75N90 2809 aa6.96□□□□□ -1.29
HERC3-203ENST00000407637 TPRXLQ17RH7 258 aa6.96□□□□□ -1.3
HERC3-203ENST00000407637 C20orf166-AS1Q96NR2 134 aa6.96□□□□□ -1.3
HERC3-203ENST00000407637 COX6B2Q6YFQ2 88 aa6.94□□□□□ -1.3
HERC3-203ENST00000407637 DNAH6Q9C0G6 4158 aa6.93□□□□□ -1.3
HERC3-203ENST00000407637 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
HERC3-203ENST00000407637 KRTAP3-1Q9BYR8 98 aa6.92□□□□□ -1.3
HERC3-203ENST00000407637 DNHD1Q96M86 4753 aa6.92□□□□□ -1.3
HERC3-203ENST00000407637 STARD9Q9P2P6 4700 aa6.91□□□□□ -1.3
HERC3-203ENST00000407637 C10orf95Q9H7T3 257 aa6.9□□□□□ -1.3
HERC3-203ENST00000407637 PRKDCP78527 4128 aaKnown RBP6.9□□□□□ -1.31
HERC3-203ENST00000407637 A0A0A0MQY5 61 aa6.87□□□□□ -1.31
HERC3-203ENST00000407637 DMBT1Q9UGM3 2413 aaPredicted RBP6.87□□□□□ -1.31
HERC3-203ENST00000407637 DNAH5Q8TE73 4624 aa6.84□□□□□ -1.31
HERC3-203ENST00000407637 RPL37P61927 97 aaKnown RBP6.83□□□□□ -1.32
HERC3-203ENST00000407637 A0A0D9SG42 100 aa6.81□□□□□ -1.32
HERC3-203ENST00000407637 LRP1BQ9NZR2 4599 aa6.8□□□□□ -1.32
HERC3-203ENST00000407637 KRTAP21-3Q3LHN1 58 aa6.79□□□□□ -1.32
HERC3-203ENST00000407637 KRTAP1-4P0C5Y4 121 aa6.78□□□□□ -1.32
HERC3-203ENST00000407637 KRTAP13-4Q3LI77 160 aa6.78□□□□□ -1.32
HERC3-203ENST00000407637 VPS13BQ7Z7G8 4022 aa6.75□□□□□ -1.33
HERC3-203ENST00000407637 C9orf92A6NGG3 77 aa6.72□□□□□ -1.33
HERC3-203ENST00000407637 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
HERC3-203ENST00000407637 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
HERC3-203ENST00000407637 FAT2Q9NYQ8 4349 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms