RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 DNHD1Q96M86 4753 aa5.7□□□□□ -1.5
SMC1B-202ENST00000404354 C14orf177Q52M58 125 aa5.7□□□□□ -1.5
SMC1B-202ENST00000404354 ADM2Q7Z4H4 148 aa5.7□□□□□ -1.5
SMC1B-202ENST00000404354 PSORS1C2Q9UIG4 136 aa5.7□□□□□ -1.5
SMC1B-202ENST00000404354 APLNQ9ULZ1 77 aa5.69□□□□□ -1.5
SMC1B-202ENST00000404354 KRTAP13-1Q8IUC0 172 aa5.69□□□□□ -1.5
SMC1B-202ENST00000404354 MDFIQ99750 246 aa5.69□□□□□ -1.5
SMC1B-202ENST00000404354 Q6ZR54 194 aa5.68□□□□□ -1.5
SMC1B-202ENST00000404354 WWC2-AS2Q96NR7 200 aa5.68□□□□□ -1.5
SMC1B-202ENST00000404354 PLECQ15149 4684 aaKnown RBP5.67□□□□□ -1.5
SMC1B-202ENST00000404354 NBDYA0A0U1RRE5 68 aa5.67□□□□□ -1.5
SMC1B-202ENST00000404354 C7orf65Q6ZTY9 151 aa5.65□□□□□ -1.5
SMC1B-202ENST00000404354 ASB16-AS1Q495Z4 193 aa5.65□□□□□ -1.51
SMC1B-202ENST00000404354 MEGF8Q7Z7M0 2845 aa5.64□□□□□ -1.51
SMC1B-202ENST00000404354 SPACA4Q8TDM5 124 aa5.64□□□□□ -1.51
SMC1B-202ENST00000404354 DNAH8Q96JB1 4490 aa5.63□□□□□ -1.51
SMC1B-202ENST00000404354 PRKDCP78527 4128 aaKnown RBP5.63□□□□□ -1.51
SMC1B-202ENST00000404354 LINC00313P59037 77 aa5.63□□□□□ -1.51
SMC1B-202ENST00000404354 PLAC8Q9NZF1 115 aa5.63□□□□□ -1.51
SMC1B-202ENST00000404354 RTL8CO15255 209 aa5.61□□□□□ -1.51
SMC1B-202ENST00000404354 Q6ZRN7 208 aaPredicted RBP5.61□□□□□ -1.51
SMC1B-202ENST00000404354 IGLV5-52A0A0A0MRZ9 124 aa5.6□□□□□ -1.51
SMC1B-202ENST00000404354 ZNF861PO60384 105 aa5.6□□□□□ -1.51
SMC1B-202ENST00000404354 SPINK1P00995 79 aa5.6□□□□□ -1.51
SMC1B-202ENST00000404354 ACYP2P14621 99 aa5.6□□□□□ -1.51
SMC1B-202ENST00000404354 IGKV2D-30A0A075B6S6 120 aa5.59□□□□□ -1.51
SMC1B-202ENST00000404354 A0A087WTM6 91 aa5.59□□□□□ -1.51
SMC1B-202ENST00000404354 A0A1B0GU69 56 aa5.59□□□□□ -1.51
SMC1B-202ENST00000404354 IGKV2-30P06310 120 aa5.59□□□□□ -1.51
SMC1B-202ENST00000404354 ZNF706Q9Y5V0 76 aaPredicted RBP5.59□□□□□ -1.52
SMC1B-202ENST00000404354 LINC00483Q53H64 154 aa5.58□□□□□ -1.52
SMC1B-202ENST00000404354 KMT2AQ03164 3969 aa5.58□□□□□ -1.52
SMC1B-202ENST00000404354 FLG2Q5D862 2391 aaPredicted RBP5.57□□□□□ -1.52
SMC1B-202ENST00000404354 DYNC2H1Q8NCM8 4307 aaKnown RBP5.56□□□□□ -1.52
SMC1B-202ENST00000404354 DNAH17Q9UFH2 4485 aa5.55□□□□□ -1.52
SMC1B-202ENST00000404354 STARD9Q9P2P6 4700 aa5.54□□□□□ -1.52
SMC1B-202ENST00000404354 KRTAP13-3Q3SY46 172 aa5.53□□□□□ -1.52
SMC1B-202ENST00000404354 IGLV7-43P04211 117 aa5.52□□□□□ -1.53
SMC1B-202ENST00000404354 C8orf87E5RJ46 101 aa5.5□□□□□ -1.53
SMC1B-202ENST00000404354 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
SMC1B-202ENST00000404354 DMAC1Q96GE9 116 aa5.5□□□□□ -1.53
SMC1B-202ENST00000404354 Q8N1X5 172 aa5.49□□□□□ -1.53
SMC1B-202ENST00000404354 HECTD4Q9Y4D8 3996 aa5.48□□□□□ -1.53
SMC1B-202ENST00000404354 DNAH6Q9C0G6 4158 aa5.48□□□□□ -1.53
SMC1B-202ENST00000404354 DNAH2Q9P225 4427 aa5.48□□□□□ -1.53
SMC1B-202ENST00000404354 NUPR2A6NF83 97 aa5.48□□□□□ -1.53
SMC1B-202ENST00000404354 FAM229AH3BQW9 127 aa5.47□□□□□ -1.53
SMC1B-202ENST00000404354 DMBT1Q9UGM3 2413 aaPredicted RBP5.47□□□□□ -1.53
SMC1B-202ENST00000404354 LY6G6CO95867 125 aa5.47□□□□□ -1.53
SMC1B-202ENST00000404354 VPS13DQ5THJ4 4388 aa5.46□□□□□ -1.54
SMC1B-202ENST00000404354 UQCR11O14957 56 aa5.46□□□□□ -1.54
SMC1B-202ENST00000404354 CSAG1Q6PB30 78 aa5.46□□□□□ -1.54
SMC1B-202ENST00000404354 DNAH11Q96DT5 4516 aa5.45□□□□□ -1.54
SMC1B-202ENST00000404354 KRTAP13-2Q52LG2 175 aa5.44□□□□□ -1.54
SMC1B-202ENST00000404354 KRTAP10-2P60368 255 aa5.44□□□□□ -1.54
SMC1B-202ENST00000404354 LINC01554Q52M75 96 aa5.43□□□□□ -1.54
SMC1B-202ENST00000404354 SPATA8Q6RVD6 105 aa5.43□□□□□ -1.54
SMC1B-202ENST00000404354 C1orf134Q5TEV5 83 aa5.43□□□□□ -1.54
SMC1B-202ENST00000404354 ALMS1Q8TCU4 4167 aa5.42□□□□□ -1.54
SMC1B-202ENST00000404354 SSBP3-AS1Q7Z2R9 100 aa5.42□□□□□ -1.54
SMC1B-202ENST00000404354 PLA2G1BP04054 148 aaKnown RBP5.41□□□□□ -1.54
SMC1B-202ENST00000404354 LRP1BQ9NZR2 4599 aa5.41□□□□□ -1.54
SMC1B-202ENST00000404354 CRIPTQ9P021 101 aa5.39□□□□□ -1.55
SMC1B-202ENST00000404354 KRTAP16-1A8MUX0 517 aa5.37□□□□□ -1.55
SMC1B-202ENST00000404354 C4orf48Q5BLP8 95 aa5.36□□□□□ -1.55
SMC1B-202ENST00000404354 HYDINQ4G0P3 5121 aa5.35□□□□□ -1.55
SMC1B-202ENST00000404354 C9orf92A6NGG3 77 aa5.35□□□□□ -1.55
SMC1B-202ENST00000404354 KRTAP10-1P60331 282 aa5.34□□□□□ -1.56
SMC1B-202ENST00000404354 H3BS24 57 aa5.33□□□□□ -1.56
SMC1B-202ENST00000404354 TYMSOSQ8TAI1 123 aa5.33□□□□□ -1.56
SMC1B-202ENST00000404354 DNAH5Q8TE73 4624 aa5.31□□□□□ -1.56
SMC1B-202ENST00000404354 Q6ZSA8 131 aa5.29□□□□□ -1.56
SMC1B-202ENST00000404354 KRTAP1-4P0C5Y4 121 aa5.28□□□□□ -1.56
SMC1B-202ENST00000404354 VPS13BQ7Z7G8 4022 aa5.28□□□□□ -1.56
SMC1B-202ENST00000404354 H0YAA0 97 aa5.28□□□□□ -1.56
SMC1B-202ENST00000404354 FAT2Q9NYQ8 4349 aa5.27□□□□□ -1.57
SMC1B-202ENST00000404354 SMR3BP02814 79 aaPredicted RBP5.27□□□□□ -1.57
SMC1B-202ENST00000404354 PKD1P98161 4303 aa5.24□□□□□ -1.57
SMC1B-202ENST00000404354 LINC00304Q8N9R0 145 aa5.23□□□□□ -1.57
SMC1B-202ENST00000404354 A0A1B0GU33 70 aa5.22□□□□□ -1.57
SMC1B-202ENST00000404354 A8MUU9 505 aa5.19□□□□□ -1.58
SMC1B-202ENST00000404354 KRTAP3-1Q9BYR8 98 aa5.19□□□□□ -1.58
SMC1B-202ENST00000404354 PKHD1P08F94 4074 aa5.18□□□□□ -1.58
SMC1B-202ENST00000404354 FAT1Q14517 4588 aa5.18□□□□□ -1.58
SMC1B-202ENST00000404354 SACSQ9NZJ4 4579 aa5.17□□□□□ -1.58
SMC1B-202ENST00000404354 A0A0D9SG42 100 aa5.16□□□□□ -1.58
SMC1B-202ENST00000404354 KRTAP25-1Q3LHN0 102 aa5.16□□□□□ -1.58
SMC1B-202ENST00000404354 H1FX-AS1Q4G0G2 97 aa5.15□□□□□ -1.59
SMC1B-202ENST00000404354 KMT2CQ8NEZ4 4911 aaKnown RBP5.14□□□□□ -1.59
SMC1B-202ENST00000404354 COX6B2Q6YFQ2 88 aa5.1□□□□□ -1.59
SMC1B-202ENST00000404354 ROMO1P60602 79 aa5.1□□□□□ -1.59
SMC1B-202ENST00000404354 K7ERS5 55 aa5.08□□□□□ -1.6
SMC1B-202ENST00000404354 MYCBP2O75592 4640 aa5.08□□□□□ -1.6
SMC1B-202ENST00000404354 C10orf95Q9H7T3 257 aa5.04□□□□□ -1.6
SMC1B-202ENST00000404354 C20orf166-AS1Q96NR2 134 aa5.03□□□□□ -1.6
SMC1B-202ENST00000404354 DYNC1H1Q14204 4646 aaKnown RBP5.02□□□□□ -1.61
SMC1B-202ENST00000404354 RYR2Q92736 4967 aa5.02□□□□□ -1.61
SMC1B-202ENST00000404354 RYR3Q15413 4870 aa5.02□□□□□ -1.61
SMC1B-202ENST00000404354 KRTAP13-4Q3LI77 160 aa5.02□□□□□ -1.61
SMC1B-202ENST00000404354 SPINT4Q6UDR6 99 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms