RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 SRRM2Q9UQ35 2752 aaKnown RBP7.04□□□□□ -1.28
PCDHGA8-201ENST00000398604 KRTAP10-1P60331 282 aa7.02□□□□□ -1.29
PCDHGA8-201ENST00000398604 OXTP01178 125 aa7.01□□□□□ -1.29
PCDHGA8-201ENST00000398604 SPRR1AP35321 89 aa7.01□□□□□ -1.29
PCDHGA8-201ENST00000398604 CAMK2N1Q7Z7J9 78 aa7□□□□□ -1.29
PCDHGA8-201ENST00000398604 Q5XG85 94 aa7□□□□□ -1.29
PCDHGA8-201ENST00000398604 TENM2Q9NT68 2774 aa6.99□□□□□ -1.29
PCDHGA8-201ENST00000398604 SPANXA2-OT1Q8N9U9 137 aa6.99□□□□□ -1.29
PCDHGA8-201ENST00000398604 MMP24-AS1A0A0U1RRL7 71 aa6.98□□□□□ -1.29
PCDHGA8-201ENST00000398604 PANO1I0J062 215 aa6.98□□□□□ -1.29
PCDHGA8-201ENST00000398604 FAM229BQ4G0N7 80 aa6.98□□□□□ -1.29
PCDHGA8-201ENST00000398604 H3BS24 57 aa6.98□□□□□ -1.29
PCDHGA8-201ENST00000398604 KRTAP26-1Q6PEX3 210 aa6.97□□□□□ -1.29
PCDHGA8-201ENST00000398604 Q5VSD8 79 aa6.96□□□□□ -1.29
PCDHGA8-201ENST00000398604 CDC42SE1Q9NRR8 79 aa6.96□□□□□ -1.3
PCDHGA8-201ENST00000398604 SPINK7P58062 85 aa6.95□□□□□ -1.3
PCDHGA8-201ENST00000398604 FP248Q71RG6 208 aaPredicted RBP6.95□□□□□ -1.3
PCDHGA8-201ENST00000398604 A0A1B0GU33 70 aa6.94□□□□□ -1.3
PCDHGA8-201ENST00000398604 ZCCHC13Q8WW36 166 aaKnown RBP6.94□□□□□ -1.3
PCDHGA8-201ENST00000398604 LCE6AA0A183 80 aa6.94□□□□□ -1.3
PCDHGA8-201ENST00000398604 LINC00472Q9H8W2 130 aa6.92□□□□□ -1.3
PCDHGA8-201ENST00000398604 TRRAPQ9Y4A5 3859 aa6.92□□□□□ -1.3
PCDHGA8-201ENST00000398604 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
PCDHGA8-201ENST00000398604 Q5W150 140 aa6.89□□□□□ -1.31
PCDHGA8-201ENST00000398604 SPRR1BP22528 89 aa6.88□□□□□ -1.31
PCDHGA8-201ENST00000398604 KTN1-AS1Q86SY8 53 aa6.85□□□□□ -1.31
PCDHGA8-201ENST00000398604 A0A087X002 238 aa6.84□□□□□ -1.31
PCDHGA8-201ENST00000398604 Q6ZR54 194 aa6.84□□□□□ -1.31
PCDHGA8-201ENST00000398604 Q1T7F1 81 aa6.83□□□□□ -1.32
PCDHGA8-201ENST00000398604 R4GN34 69 aa6.83□□□□□ -1.32
PCDHGA8-201ENST00000398604 KRTAP4-16G5E9R7 235 aaPredicted RBP6.81□□□□□ -1.32
PCDHGA8-201ENST00000398604 S4R3F8 94 aa6.81□□□□□ -1.32
PCDHGA8-201ENST00000398604 SEC61BP60468 96 aaKnown RBP6.8□□□□□ -1.32
PCDHGA8-201ENST00000398604 LCA10Q71F78 164 aa6.8□□□□□ -1.32
PCDHGA8-201ENST00000398604 FBN1P35555 2871 aaKnown RBP6.78□□□□□ -1.32
PCDHGA8-201ENST00000398604 KRTAP11-1Q8IUC1 163 aa6.77□□□□□ -1.33
PCDHGA8-201ENST00000398604 LUZP6Q538Z0 58 aa6.76□□□□□ -1.33
PCDHGA8-201ENST00000398604 PRAC1Q96KF2 57 aa6.75□□□□□ -1.33
PCDHGA8-201ENST00000398604 NOTCH2NLQ7Z3S9 236 aa6.75□□□□□ -1.33
PCDHGA8-201ENST00000398604 LINC01558Q9Y6Z2 57 aa6.73□□□□□ -1.33
PCDHGA8-201ENST00000398604 KRTAP7-1Q8IUC3 87 aa6.72□□□□□ -1.33
PCDHGA8-201ENST00000398604 TGP01266 2768 aa6.7□□□□□ -1.34
PCDHGA8-201ENST00000398604 Q75L30 129 aa6.7□□□□□ -1.34
PCDHGA8-201ENST00000398604 DMAC1Q96GE9 116 aa6.7□□□□□ -1.34
PCDHGA8-201ENST00000398604 Q5VV11 94 aa6.69□□□□□ -1.34
PCDHGA8-201ENST00000398604 M0QZ58 72 aa6.68□□□□□ -1.34
PCDHGA8-201ENST00000398604 LINC00483Q53H64 154 aa6.68□□□□□ -1.34
PCDHGA8-201ENST00000398604 Q6ZRN7 208 aaPredicted RBP6.67□□□□□ -1.34
PCDHGA8-201ENST00000398604 KRTAP29-1A8MX34 341 aaPredicted RBP6.66□□□□□ -1.34
PCDHGA8-201ENST00000398604 SPATA8Q6RVD6 105 aa6.63□□□□□ -1.35
PCDHGA8-201ENST00000398604 RPL37P61927 97 aaKnown RBP6.61□□□□□ -1.35
PCDHGA8-201ENST00000398604 ADM2Q7Z4H4 148 aa6.59□□□□□ -1.36
PCDHGA8-201ENST00000398604 KRTAP13-2Q52LG2 175 aa6.57□□□□□ -1.36
PCDHGA8-201ENST00000398604 H1FX-AS1Q4G0G2 97 aa6.53□□□□□ -1.36
PCDHGA8-201ENST00000398604 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
PCDHGA8-201ENST00000398604 A8MU10 97 aa6.49□□□□□ -1.37
PCDHGA8-201ENST00000398604 ANK2Q01484 3957 aa6.49□□□□□ -1.37
PCDHGA8-201ENST00000398604 ROMO1P60602 79 aa6.46□□□□□ -1.38
PCDHGA8-201ENST00000398604 KRTAP13-1Q8IUC0 172 aa6.44□□□□□ -1.38
PCDHGA8-201ENST00000398604 C20orf166-AS1Q96NR2 134 aa6.43□□□□□ -1.38
PCDHGA8-201ENST00000398604 HUWE1Q7Z6Z7 4374 aaKnown RBP6.42□□□□□ -1.38
PCDHGA8-201ENST00000398604 A8MUU9 505 aa6.4□□□□□ -1.38
PCDHGA8-201ENST00000398604 ASB16-AS1Q495Z4 193 aa6.4□□□□□ -1.39
PCDHGA8-201ENST00000398604 CSMD3Q7Z407 3707 aa6.39□□□□□ -1.39
PCDHGA8-201ENST00000398604 CMYA5Q8N3K9 4069 aa6.37□□□□□ -1.39
PCDHGA8-201ENST00000398604 RPS29P62273 56 aaKnown RBP6.37□□□□□ -1.39
PCDHGA8-201ENST00000398604 COL7A1Q02388 2944 aa6.36□□□□□ -1.39
PCDHGA8-201ENST00000398604 DNAH10Q8IVF4 4471 aa6.31□□□□□ -1.4
PCDHGA8-201ENST00000398604 A6NN06 94 aa6.29□□□□□ -1.4
PCDHGA8-201ENST00000398604 A0A0A0MQY5 61 aa6.29□□□□□ -1.4
PCDHGA8-201ENST00000398604 FBN3Q75N90 2809 aa6.28□□□□□ -1.4
PCDHGA8-201ENST00000398604 DNAH3Q8TD57 4116 aa6.27□□□□□ -1.41
PCDHGA8-201ENST00000398604 LYSTQ99698 3801 aa6.26□□□□□ -1.41
PCDHGA8-201ENST00000398604 DNAH9Q9NYC9 4486 aa6.25□□□□□ -1.41
PCDHGA8-201ENST00000398604 A0A1B0GVY2 172 aa6.24□□□□□ -1.41
PCDHGA8-201ENST00000398604 KRTAP1-4P0C5Y4 121 aa6.23□□□□□ -1.41
PCDHGA8-201ENST00000398604 PLECQ15149 4684 aaKnown RBP6.18□□□□□ -1.42
PCDHGA8-201ENST00000398604 DNAH1Q9P2D7 4330 aa6.18□□□□□ -1.42
PCDHGA8-201ENST00000398604 XP32Q5T750 250 aa6.18□□□□□ -1.42
PCDHGA8-201ENST00000398604 DNAH7Q8WXX0 4024 aa6.13□□□□□ -1.43
PCDHGA8-201ENST00000398604 MEGF8Q7Z7M0 2845 aa6.12□□□□□ -1.43
PCDHGA8-201ENST00000398604 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
PCDHGA8-201ENST00000398604 KRTAP25-1Q3LHN0 102 aa6.11□□□□□ -1.43
PCDHGA8-201ENST00000398604 TNP1P09430 55 aa6.1□□□□□ -1.43
PCDHGA8-201ENST00000398604 KRTAP16-1A8MUX0 517 aa6.09□□□□□ -1.44
PCDHGA8-201ENST00000398604 STARD9Q9P2P6 4700 aa6.08□□□□□ -1.44
PCDHGA8-201ENST00000398604 PRKDCP78527 4128 aaKnown RBP6.05□□□□□ -1.44
PCDHGA8-201ENST00000398604 NDUFAF8A1L188 74 aa6.04□□□□□ -1.44
PCDHGA8-201ENST00000398604 C10orf95Q9H7T3 257 aa6.03□□□□□ -1.44
PCDHGA8-201ENST00000398604 KRTAP10-10P60014 251 aa6.03□□□□□ -1.44
PCDHGA8-201ENST00000398604 KMT2AQ03164 3969 aa6.01□□□□□ -1.45
PCDHGA8-201ENST00000398604 VPS13DQ5THJ4 4388 aa6.01□□□□□ -1.45
PCDHGA8-201ENST00000398604 KRTAP13-3Q3SY46 172 aa5.98□□□□□ -1.45
PCDHGA8-201ENST00000398604 TPRXLQ17RH7 258 aa5.98□□□□□ -1.45
PCDHGA8-201ENST00000398604 DYNC2H1Q8NCM8 4307 aaKnown RBP5.98□□□□□ -1.45
PCDHGA8-201ENST00000398604 DNHD1Q96M86 4753 aa5.98□□□□□ -1.45
PCDHGA8-201ENST00000398604 P0C880 135 aa5.96□□□□□ -1.46
PCDHGA8-201ENST00000398604 DNAH2Q9P225 4427 aa5.92□□□□□ -1.46
PCDHGA8-201ENST00000398604 FRAS1Q86XX4 4008 aa5.91□□□□□ -1.46
PCDHGA8-201ENST00000398604 H0YAA0 97 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms