RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 RBM12B-AS1Q9P1G2 102 aa6.18□□□□□ -1.42
CPSF1P1-201ENST00000397477 PLA2G1BP04054 148 aaKnown RBP6.17□□□□□ -1.42
CPSF1P1-201ENST00000397477 SPAG11AQ6PDA7 123 aa6.17□□□□□ -1.42
CPSF1P1-201ENST00000397477 Q96NJ1 140 aa6.17□□□□□ -1.42
CPSF1P1-201ENST00000397477 LINC00483Q53H64 154 aa6.17□□□□□ -1.42
CPSF1P1-201ENST00000397477 TP53AIP1Q9HCN2 124 aa6.17□□□□□ -1.42
CPSF1P1-201ENST00000397477 KMT2AQ03164 3969 aa6.17□□□□□ -1.42
CPSF1P1-201ENST00000397477 COA5Q86WW8 74 aa6.16□□□□□ -1.42
CPSF1P1-201ENST00000397477 LCE6AA0A183 80 aa6.15□□□□□ -1.42
CPSF1P1-201ENST00000397477 LINC00313P59037 77 aa6.15□□□□□ -1.42
CPSF1P1-201ENST00000397477 Q1T7F1 81 aa6.15□□□□□ -1.42
CPSF1P1-201ENST00000397477 DNAH1Q9P2D7 4330 aa6.15□□□□□ -1.42
CPSF1P1-201ENST00000397477 IGKV2D-30A0A075B6S6 120 aa6.15□□□□□ -1.43
CPSF1P1-201ENST00000397477 IGKV2-30P06310 120 aa6.15□□□□□ -1.43
CPSF1P1-201ENST00000397477 KTN1-AS1Q86SY8 53 aa6.15□□□□□ -1.43
CPSF1P1-201ENST00000397477 H3BPC8 53 aa6.14□□□□□ -1.43
CPSF1P1-201ENST00000397477 TYMSOSQ8TAI1 123 aa6.13□□□□□ -1.43
CPSF1P1-201ENST00000397477 SSBP3-AS1Q7Z2R9 100 aa6.13□□□□□ -1.43
CPSF1P1-201ENST00000397477 CYP4F30PQ9H0H9 118 aa6.11□□□□□ -1.43
CPSF1P1-201ENST00000397477 Q8N9P0 234 aaPredicted RBP6.1□□□□□ -1.43
CPSF1P1-201ENST00000397477 Q5W150 140 aa6.1□□□□□ -1.43
CPSF1P1-201ENST00000397477 Q5VV11 94 aa6.09□□□□□ -1.43
CPSF1P1-201ENST00000397477 PRR26Q8N8Z3 221 aa6.08□□□□□ -1.44
CPSF1P1-201ENST00000397477 LIMD2Q9BT23 127 aa6.08□□□□□ -1.44
CPSF1P1-201ENST00000397477 SPINK1P00995 79 aa6.07□□□□□ -1.44
CPSF1P1-201ENST00000397477 KRTAP13-2Q52LG2 175 aa6.07□□□□□ -1.44
CPSF1P1-201ENST00000397477 SPANXA2-OT1Q8N9U9 137 aa6.07□□□□□ -1.44
CPSF1P1-201ENST00000397477 IGLV7-46A0A075B6I9 117 aa6.06□□□□□ -1.44
CPSF1P1-201ENST00000397477 FRAS1Q86XX4 4008 aa6.06□□□□□ -1.44
CPSF1P1-201ENST00000397477 LOC101927531A0A1B0GV80 90 aa6.05□□□□□ -1.44
CPSF1P1-201ENST00000397477 DMBT1Q9UGM3 2413 aaPredicted RBP6.04□□□□□ -1.44
CPSF1P1-201ENST00000397477 C9orf92A6NGG3 77 aa6.04□□□□□ -1.44
CPSF1P1-201ENST00000397477 DNAH11Q96DT5 4516 aa6.04□□□□□ -1.44
CPSF1P1-201ENST00000397477 VPS13DQ5THJ4 4388 aa6.04□□□□□ -1.44
CPSF1P1-201ENST00000397477 ATP11AUNQ6ZP68 121 aa6.03□□□□□ -1.44
CPSF1P1-201ENST00000397477 FLG2Q5D862 2391 aaPredicted RBP6.03□□□□□ -1.44
CPSF1P1-201ENST00000397477 C8orf87E5RJ46 101 aa6.02□□□□□ -1.45
CPSF1P1-201ENST00000397477 HRES1P13985 223 aa6.02□□□□□ -1.45
CPSF1P1-201ENST00000397477 FAM229AH3BQW9 127 aa6.01□□□□□ -1.45
CPSF1P1-201ENST00000397477 DNAH2Q9P225 4427 aa6.01□□□□□ -1.45
CPSF1P1-201ENST00000397477 LCA10Q71F78 164 aa6□□□□□ -1.45
CPSF1P1-201ENST00000397477 C7orf65Q6ZTY9 151 aa6□□□□□ -1.45
CPSF1P1-201ENST00000397477 LINC00304Q8N9R0 145 aa6□□□□□ -1.45
CPSF1P1-201ENST00000397477 PRAC1Q96KF2 57 aa5.99□□□□□ -1.45
CPSF1P1-201ENST00000397477 ACYP2P14621 99 aa5.99□□□□□ -1.45
CPSF1P1-201ENST00000397477 H3BS24 57 aa5.98□□□□□ -1.45
CPSF1P1-201ENST00000397477 DNAH6Q9C0G6 4158 aa5.98□□□□□ -1.45
CPSF1P1-201ENST00000397477 DNAH8Q96JB1 4490 aa5.98□□□□□ -1.45
CPSF1P1-201ENST00000397477 Q8N1X5 172 aa5.97□□□□□ -1.45
CPSF1P1-201ENST00000397477 HECTD4Q9Y4D8 3996 aa5.96□□□□□ -1.45
CPSF1P1-201ENST00000397477 DNAH17Q9UFH2 4485 aa5.96□□□□□ -1.46
CPSF1P1-201ENST00000397477 ASB16-AS1Q495Z4 193 aa5.95□□□□□ -1.46
CPSF1P1-201ENST00000397477 KRTAP1-4P0C5Y4 121 aa5.94□□□□□ -1.46
CPSF1P1-201ENST00000397477 KRTAP21-3Q3LHN1 58 aa5.94□□□□□ -1.46
CPSF1P1-201ENST00000397477 Q6ZSA8 131 aa5.94□□□□□ -1.46
CPSF1P1-201ENST00000397477 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
CPSF1P1-201ENST00000397477 DYNC2H1Q8NCM8 4307 aaKnown RBP5.93□□□□□ -1.46
CPSF1P1-201ENST00000397477 LRP1BQ9NZR2 4599 aa5.92□□□□□ -1.46
CPSF1P1-201ENST00000397477 Q75L30 129 aa5.92□□□□□ -1.46
CPSF1P1-201ENST00000397477 A6NN06 94 aa5.91□□□□□ -1.46
CPSF1P1-201ENST00000397477 SPINK7P58062 85 aa5.91□□□□□ -1.46
CPSF1P1-201ENST00000397477 A0A1B0GU69 56 aa5.9□□□□□ -1.46
CPSF1P1-201ENST00000397477 HYDINQ4G0P3 5121 aa5.87□□□□□ -1.47
CPSF1P1-201ENST00000397477 ADM2Q7Z4H4 148 aa5.86□□□□□ -1.47
CPSF1P1-201ENST00000397477 LINC01558Q9Y6Z2 57 aa5.85□□□□□ -1.47
CPSF1P1-201ENST00000397477 DNAH5Q8TE73 4624 aa5.84□□□□□ -1.47
CPSF1P1-201ENST00000397477 LINC01554Q52M75 96 aa5.83□□□□□ -1.48
CPSF1P1-201ENST00000397477 DMAC1Q96GE9 116 aa5.82□□□□□ -1.48
CPSF1P1-201ENST00000397477 KRTAP13-3Q3SY46 172 aa5.81□□□□□ -1.48
CPSF1P1-201ENST00000397477 FAT1Q14517 4588 aa5.8□□□□□ -1.48
CPSF1P1-201ENST00000397477 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
CPSF1P1-201ENST00000397477 VPS13BQ7Z7G8 4022 aa5.79□□□□□ -1.48
CPSF1P1-201ENST00000397477 PKHD1P08F94 4074 aa5.76□□□□□ -1.49
CPSF1P1-201ENST00000397477 ALMS1Q8TCU4 4167 aa5.75□□□□□ -1.49
CPSF1P1-201ENST00000397477 MIR22HGQ0VDD5 57 aa5.72□□□□□ -1.49
CPSF1P1-201ENST00000397477 UQCR11O14957 56 aa5.72□□□□□ -1.49
CPSF1P1-201ENST00000397477 Q5VSD8 79 aa5.71□□□□□ -1.49
CPSF1P1-201ENST00000397477 CSAG1Q6PB30 78 aa5.71□□□□□ -1.49
CPSF1P1-201ENST00000397477 DYNC1H1Q14204 4646 aaKnown RBP5.69□□□□□ -1.5
CPSF1P1-201ENST00000397477 FAT2Q9NYQ8 4349 aa5.68□□□□□ -1.5
CPSF1P1-201ENST00000397477 A0A1B0GVY2 172 aa5.67□□□□□ -1.5
CPSF1P1-201ENST00000397477 PKD1P98161 4303 aa5.64□□□□□ -1.51
CPSF1P1-201ENST00000397477 SACSQ9NZJ4 4579 aa5.63□□□□□ -1.51
CPSF1P1-201ENST00000397477 RPS29P62273 56 aaKnown RBP5.61□□□□□ -1.51
CPSF1P1-201ENST00000397477 A8MUU9 505 aa5.6□□□□□ -1.51
CPSF1P1-201ENST00000397477 C20orf166-AS1Q96NR2 134 aa5.59□□□□□ -1.52
CPSF1P1-201ENST00000397477 MYCBP2O75592 4640 aa5.58□□□□□ -1.52
CPSF1P1-201ENST00000397477 KMT2CQ8NEZ4 4911 aaKnown RBP5.57□□□□□ -1.52
CPSF1P1-201ENST00000397477 SPATA8Q6RVD6 105 aa5.57□□□□□ -1.52
CPSF1P1-201ENST00000397477 A0A1B0GU33 70 aa5.56□□□□□ -1.52
CPSF1P1-201ENST00000397477 KRTAP10-4P60372 401 aaPredicted RBP5.56□□□□□ -1.52
CPSF1P1-201ENST00000397477 A0A0D9SG42 100 aa5.56□□□□□ -1.52
CPSF1P1-201ENST00000397477 LRP1Q07954 4544 aaKnown RBP5.56□□□□□ -1.52
CPSF1P1-201ENST00000397477 APOBP04114 4563 aaKnown RBP5.55□□□□□ -1.52
CPSF1P1-201ENST00000397477 CRIPTQ9P021 101 aa5.54□□□□□ -1.52
CPSF1P1-201ENST00000397477 COX6B2Q6YFQ2 88 aa5.53□□□□□ -1.52
CPSF1P1-201ENST00000397477 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
CPSF1P1-201ENST00000397477 K7ERS5 55 aa5.49□□□□□ -1.53
CPSF1P1-201ENST00000397477 KIAA1109Q2LD37 5005 aa5.47□□□□□ -1.53
CPSF1P1-201ENST00000397477 XP32Q5T750 250 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms