RNA–Protein interactions for RNA: ENST00000395366.2

PPP1CB-203, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 4,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-203ENST00000395366 C9orf92A6NGG3 77 aa8.9□□□□□ -0.98
PPP1CB-203ENST00000395366 UQCR11O14957 56 aa8.9□□□□□ -0.98
PPP1CB-203ENST00000395366 MIR22HGQ0VDD5 57 aa8.9□□□□□ -0.98
PPP1CB-203ENST00000395366 LINC00472Q9H8W2 130 aa8.9□□□□□ -0.98
PPP1CB-203ENST00000395366 SPANXA2-OT1Q8N9U9 137 aa8.9□□□□□ -0.99
PPP1CB-203ENST00000395366 KRTAP10-1P60331 282 aa8.89□□□□□ -0.99
PPP1CB-203ENST00000395366 VWFP04275 2813 aa8.89□□□□□ -0.99
PPP1CB-203ENST00000395366 KRTAP11-1Q8IUC1 163 aa8.86□□□□□ -0.99
PPP1CB-203ENST00000395366 MMP24-AS1A0A0U1RRL7 71 aa8.86□□□□□ -0.99
PPP1CB-203ENST00000395366 SPINK7P58062 85 aa8.83□□□□□ -1
PPP1CB-203ENST00000395366 LCE6AA0A183 80 aa8.82□□□□□ -1
PPP1CB-203ENST00000395366 LINC00483Q53H64 154 aa8.81□□□□□ -1
PPP1CB-203ENST00000395366 CSMD2Q7Z408 3487 aa8.8□□□□□ -1
PPP1CB-203ENST00000395366 LINC01558Q9Y6Z2 57 aa8.79□□□□□ -1
PPP1CB-203ENST00000395366 FBN1P35555 2871 aaKnown RBP8.78□□□□□ -1
PPP1CB-203ENST00000395366 J3QL48 77 aa8.74□□□□□ -1.01
PPP1CB-203ENST00000395366 ADM2Q7Z4H4 148 aa8.74□□□□□ -1.01
PPP1CB-203ENST00000395366 ZFHX3Q15911 3703 aa8.73□□□□□ -1.01
PPP1CB-203ENST00000395366 KRTAP16-1A8MUX0 517 aa8.69□□□□□ -1.02
PPP1CB-203ENST00000395366 CUBNO60494 3623 aa8.69□□□□□ -1.02
PPP1CB-203ENST00000395366 IGLV7-46A0A075B6I9 117 aa8.68□□□□□ -1.02
PPP1CB-203ENST00000395366 KRTAP21-3Q3LHN1 58 aa8.68□□□□□ -1.02
PPP1CB-203ENST00000395366 KRTAP13-1Q8IUC0 172 aa8.68□□□□□ -1.02
PPP1CB-203ENST00000395366 A0A087X002 238 aa8.67□□□□□ -1.02
PPP1CB-203ENST00000395366 Q8N1X5 172 aa8.66□□□□□ -1.02
PPP1CB-203ENST00000395366 ANK3Q12955 4377 aaKnown RBP8.64□□□□□ -1.03
PPP1CB-203ENST00000395366 HRES1P13985 223 aa8.64□□□□□ -1.03
PPP1CB-203ENST00000395366 KRTAP29-1A8MX34 341 aaPredicted RBP8.64□□□□□ -1.03
PPP1CB-203ENST00000395366 ASB16-AS1Q495Z4 193 aa8.63□□□□□ -1.03
PPP1CB-203ENST00000395366 DMBT1Q9UGM3 2413 aaPredicted RBP8.61□□□□□ -1.03
PPP1CB-203ENST00000395366 Q5W150 140 aa8.59□□□□□ -1.03
PPP1CB-203ENST00000395366 ZCCHC13Q8WW36 166 aaKnown RBP8.58□□□□□ -1.04
PPP1CB-203ENST00000395366 Q5VSD8 79 aa8.57□□□□□ -1.04
PPP1CB-203ENST00000395366 LUZP6Q538Z0 58 aa8.54□□□□□ -1.04
PPP1CB-203ENST00000395366 NOTCH2NLQ7Z3S9 236 aa8.54□□□□□ -1.04
PPP1CB-203ENST00000395366 PKD1L1Q8TDX9 2849 aa8.52□□□□□ -1.05
PPP1CB-203ENST00000395366 TENM2Q9NT68 2774 aa8.5□□□□□ -1.05
PPP1CB-203ENST00000395366 ROMO1P60602 79 aa8.5□□□□□ -1.05
PPP1CB-203ENST00000395366 KRTAP13-2Q52LG2 175 aa8.49□□□□□ -1.05
PPP1CB-203ENST00000395366 TGP01266 2768 aa8.49□□□□□ -1.05
PPP1CB-203ENST00000395366 TRRAPQ9Y4A5 3859 aa8.48□□□□□ -1.05
PPP1CB-203ENST00000395366 DMAC1Q96GE9 116 aa8.47□□□□□ -1.05
PPP1CB-203ENST00000395366 CRIPTQ9P021 101 aa8.46□□□□□ -1.06
PPP1CB-203ENST00000395366 VPS13CQ709C8 3753 aa8.43□□□□□ -1.06
PPP1CB-203ENST00000395366 COX6B2Q6YFQ2 88 aa8.43□□□□□ -1.06
PPP1CB-203ENST00000395366 Q6ZSA8 131 aa8.42□□□□□ -1.06
PPP1CB-203ENST00000395366 NDUFAF8A1L188 74 aa8.41□□□□□ -1.06
PPP1CB-203ENST00000395366 FLG2Q5D862 2391 aaPredicted RBP8.41□□□□□ -1.06
PPP1CB-203ENST00000395366 RPS29P62273 56 aaKnown RBP8.35□□□□□ -1.07
PPP1CB-203ENST00000395366 KRTAP25-1Q3LHN0 102 aa8.35□□□□□ -1.07
PPP1CB-203ENST00000395366 SPATA8Q6RVD6 105 aa8.33□□□□□ -1.08
PPP1CB-203ENST00000395366 ZNF469Q96JG9 3925 aaPredicted RBP8.31□□□□□ -1.08
PPP1CB-203ENST00000395366 KRTAP1-4P0C5Y4 121 aa8.26□□□□□ -1.09
PPP1CB-203ENST00000395366 A0A1B0GU33 70 aa8.25□□□□□ -1.09
PPP1CB-203ENST00000395366 A0A0D9SG42 100 aa8.24□□□□□ -1.09
PPP1CB-203ENST00000395366 SEC61BP60468 96 aaKnown RBP8.2□□□□□ -1.1
PPP1CB-203ENST00000395366 S4R3F8 94 aa8.19□□□□□ -1.1
PPP1CB-203ENST00000395366 C20orf166-AS1Q96NR2 134 aa8.16□□□□□ -1.1
PPP1CB-203ENST00000395366 A8MUU9 505 aa8.13□□□□□ -1.11
PPP1CB-203ENST00000395366 AKAP9Q99996 3911 aa8.09□□□□□ -1.12
PPP1CB-203ENST00000395366 FBN3Q75N90 2809 aa8.05□□□□□ -1.12
PPP1CB-203ENST00000395366 RPL37P61927 97 aaKnown RBP8.02□□□□□ -1.13
PPP1CB-203ENST00000395366 MEGF8Q7Z7M0 2845 aa8.01□□□□□ -1.13
PPP1CB-203ENST00000395366 A0A1B0GVY2 172 aa7.99□□□□□ -1.13
PPP1CB-203ENST00000395366 H1FX-AS1Q4G0G2 97 aa7.97□□□□□ -1.13
PPP1CB-203ENST00000395366 HUWE1Q7Z6Z7 4374 aaKnown RBP7.95□□□□□ -1.14
PPP1CB-203ENST00000395366 M0R2T5 61 aa7.94□□□□□ -1.14
PPP1CB-203ENST00000395366 SRRM2Q9UQ35 2752 aaKnown RBP7.93□□□□□ -1.14
PPP1CB-203ENST00000395366 R4GN34 69 aa7.92□□□□□ -1.14
PPP1CB-203ENST00000395366 COL7A1Q02388 2944 aa7.86□□□□□ -1.15
PPP1CB-203ENST00000395366 XP32Q5T750 250 aa7.86□□□□□ -1.15
PPP1CB-203ENST00000395366 CAMK2N1Q7Z7J9 78 aa7.86□□□□□ -1.15
PPP1CB-203ENST00000395366 M0QZ58 72 aa7.81□□□□□ -1.16
PPP1CB-203ENST00000395366 KRTAP13-3Q3SY46 172 aa7.8□□□□□ -1.16
PPP1CB-203ENST00000395366 KRTAP10-8P60410 259 aa7.78□□□□□ -1.16
PPP1CB-203ENST00000395366 P0C880 135 aa7.75□□□□□ -1.17
PPP1CB-203ENST00000395366 DNAH9Q9NYC9 4486 aa7.72□□□□□ -1.17
PPP1CB-203ENST00000395366 TPRXLQ17RH7 258 aa7.71□□□□□ -1.18
PPP1CB-203ENST00000395366 CSMD3Q7Z407 3707 aa7.63□□□□□ -1.19
PPP1CB-203ENST00000395366 C10orf95Q9H7T3 257 aa7.62□□□□□ -1.19
PPP1CB-203ENST00000395366 H0YAA0 97 aa7.55□□□□□ -1.2
PPP1CB-203ENST00000395366 PLECQ15149 4684 aaKnown RBP7.55□□□□□ -1.2
PPP1CB-203ENST00000395366 DNHD1Q96M86 4753 aa7.48□□□□□ -1.21
PPP1CB-203ENST00000395366 KRTAP10-4P60372 401 aaPredicted RBP7.45□□□□□ -1.22
PPP1CB-203ENST00000395366 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
PPP1CB-203ENST00000395366 DNAH1Q9P2D7 4330 aa7.44□□□□□ -1.22
PPP1CB-203ENST00000395366 DNAH10Q8IVF4 4471 aa7.4□□□□□ -1.23
PPP1CB-203ENST00000395366 KRTAP3-1Q9BYR8 98 aa7.39□□□□□ -1.23
PPP1CB-203ENST00000395366 VPS13DQ5THJ4 4388 aa7.37□□□□□ -1.23
PPP1CB-203ENST00000395366 ALMS1Q8TCU4 4167 aa7.37□□□□□ -1.23
PPP1CB-203ENST00000395366 MT1HL1P0DM35 61 aa7.36□□□□□ -1.23
PPP1CB-203ENST00000395366 STARD9Q9P2P6 4700 aa7.35□□□□□ -1.23
PPP1CB-203ENST00000395366 DNAH11Q96DT5 4516 aa7.34□□□□□ -1.24
PPP1CB-203ENST00000395366 DNAH5Q8TE73 4624 aa7.33□□□□□ -1.24
PPP1CB-203ENST00000395366 ANK2Q01484 3957 aa7.32□□□□□ -1.24
PPP1CB-203ENST00000395366 PRKDCP78527 4128 aaKnown RBP7.31□□□□□ -1.24
PPP1CB-203ENST00000395366 DNAH17Q9UFH2 4485 aa7.26□□□□□ -1.25
PPP1CB-203ENST00000395366 KRTAP15-1Q3LI76 137 aa7.26□□□□□ -1.25
PPP1CB-203ENST00000395366 DNAH3Q8TD57 4116 aa7.22□□□□□ -1.25
PPP1CB-203ENST00000395366 KRTAP4-5Q9BYR2 181 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms