RNA–Protein interactions for RNA: ENST00000394487.4

TLR4-202, Transcript of toll like receptor 4, humanhuman

TSL 1 (best) BASIC

Gene TLR4, Length 3,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4-202ENST00000394487 NBDYA0A0U1RRE5 68 aa4.25□□□□□ -1.73
TLR4-202ENST00000394487 A0A087X002 238 aa4.24□□□□□ -1.73
TLR4-202ENST00000394487 LCE6AA0A183 80 aa4.24□□□□□ -1.73
TLR4-202ENST00000394487 NOTCH2NLQ7Z3S9 236 aa4.24□□□□□ -1.73
TLR4-202ENST00000394487 TENM2Q9NT68 2774 aa4.23□□□□□ -1.73
TLR4-202ENST00000394487 VPS13CQ709C8 3753 aa4.23□□□□□ -1.73
TLR4-202ENST00000394487 ZNF861PO60384 105 aa4.22□□□□□ -1.73
TLR4-202ENST00000394487 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.22□□□□□ -1.73
TLR4-202ENST00000394487 KRTAP7-1Q8IUC3 87 aa4.22□□□□□ -1.73
TLR4-202ENST00000394487 AKAP9Q99996 3911 aa4.21□□□□□ -1.74
TLR4-202ENST00000394487 KRTAP1-5Q9BYS1 174 aa4.21□□□□□ -1.74
TLR4-202ENST00000394487 OTOGQ6ZRI0 2925 aa4.21□□□□□ -1.74
TLR4-202ENST00000394487 A0A0D9SG42 100 aa4.21□□□□□ -1.74
TLR4-202ENST00000394487 KRTAP11-1Q8IUC1 163 aa4.2□□□□□ -1.74
TLR4-202ENST00000394487 NUPR2A6NF83 97 aa4.2□□□□□ -1.74
TLR4-202ENST00000394487 Q5W150 140 aa4.19□□□□□ -1.74
TLR4-202ENST00000394487 C9orf92A6NGG3 77 aa4.18□□□□□ -1.74
TLR4-202ENST00000394487 PANO1I0J062 215 aa4.18□□□□□ -1.74
TLR4-202ENST00000394487 NBPF19A0A087WUL8 3843 aa4.18□□□□□ -1.74
TLR4-202ENST00000394487 TGP01266 2768 aa4.17□□□□□ -1.74
TLR4-202ENST00000394487 APLNQ9ULZ1 77 aa4.17□□□□□ -1.74
TLR4-202ENST00000394487 TYMSOSQ8TAI1 123 aa4.17□□□□□ -1.74
TLR4-202ENST00000394487 PLA2G1BP04054 148 aaKnown RBP4.16□□□□□ -1.74
TLR4-202ENST00000394487 A0A087WTM6 91 aa4.15□□□□□ -1.74
TLR4-202ENST00000394487 SPRR1BP22528 89 aa4.14□□□□□ -1.75
TLR4-202ENST00000394487 IGLV7-43P04211 117 aa4.14□□□□□ -1.75
TLR4-202ENST00000394487 Q6ZR54 194 aa4.14□□□□□ -1.75
TLR4-202ENST00000394487 A0A1B0GU33 70 aa4.13□□□□□ -1.75
TLR4-202ENST00000394487 WWC2-AS2Q96NR7 200 aa4.12□□□□□ -1.75
TLR4-202ENST00000394487 COL7A1Q02388 2944 aa4.12□□□□□ -1.75
TLR4-202ENST00000394487 ZNF469Q96JG9 3925 aaPredicted RBP4.11□□□□□ -1.75
TLR4-202ENST00000394487 DMAC1Q96GE9 116 aa4.1□□□□□ -1.75
TLR4-202ENST00000394487 SPATA8Q6RVD6 105 aa4.09□□□□□ -1.76
TLR4-202ENST00000394487 SMR3BP02814 79 aaPredicted RBP4.08□□□□□ -1.76
TLR4-202ENST00000394487 ANK3Q12955 4377 aaKnown RBP4.07□□□□□ -1.76
TLR4-202ENST00000394487 TRRAPQ9Y4A5 3859 aa4.06□□□□□ -1.76
TLR4-202ENST00000394487 CSMD3Q7Z407 3707 aa4.04□□□□□ -1.76
TLR4-202ENST00000394487 LINC00304Q8N9R0 145 aa4.03□□□□□ -1.76
TLR4-202ENST00000394487 FBN3Q75N90 2809 aa4.01□□□□□ -1.77
TLR4-202ENST00000394487 CMYA5Q8N3K9 4069 aa4□□□□□ -1.77
TLR4-202ENST00000394487 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
TLR4-202ENST00000394487 LINC00483Q53H64 154 aa3.99□□□□□ -1.77
TLR4-202ENST00000394487 PLAC8Q9NZF1 115 aa3.99□□□□□ -1.77
TLR4-202ENST00000394487 ROMO1P60602 79 aa3.98□□□□□ -1.77
TLR4-202ENST00000394487 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
TLR4-202ENST00000394487 ASB16-AS1Q495Z4 193 aa3.97□□□□□ -1.77
TLR4-202ENST00000394487 H1FX-AS1Q4G0G2 97 aa3.96□□□□□ -1.78
TLR4-202ENST00000394487 KRTAP13-1Q8IUC0 172 aa3.95□□□□□ -1.78
TLR4-202ENST00000394487 A8MUU9 505 aa3.95□□□□□ -1.78
TLR4-202ENST00000394487 DNAH3Q8TD57 4116 aa3.94□□□□□ -1.78
TLR4-202ENST00000394487 RPL37P61927 97 aaKnown RBP3.93□□□□□ -1.78
TLR4-202ENST00000394487 KRTAP10-2P60368 255 aa3.93□□□□□ -1.78
TLR4-202ENST00000394487 MEGF8Q7Z7M0 2845 aa3.92□□□□□ -1.78
TLR4-202ENST00000394487 ANK2Q01484 3957 aa3.91□□□□□ -1.78
TLR4-202ENST00000394487 Q6ZSA8 131 aa3.91□□□□□ -1.78
TLR4-202ENST00000394487 C10orf95Q9H7T3 257 aa3.89□□□□□ -1.79
TLR4-202ENST00000394487 KRTAP13-2Q52LG2 175 aa3.89□□□□□ -1.79
TLR4-202ENST00000394487 H0YAA0 97 aa3.88□□□□□ -1.79
TLR4-202ENST00000394487 Q6ZRN7 208 aaPredicted RBP3.88□□□□□ -1.79
TLR4-202ENST00000394487 KRTAP10-1P60331 282 aa3.88□□□□□ -1.79
TLR4-202ENST00000394487 KRTAP16-1A8MUX0 517 aa3.86□□□□□ -1.79
TLR4-202ENST00000394487 COX6B2Q6YFQ2 88 aa3.86□□□□□ -1.79
TLR4-202ENST00000394487 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
TLR4-202ENST00000394487 S4R3F8 94 aa3.82□□□□□ -1.8
TLR4-202ENST00000394487 KRTAP13-3Q3SY46 172 aa3.8□□□□□ -1.8
TLR4-202ENST00000394487 C20orf166-AS1Q96NR2 134 aa3.78□□□□□ -1.8
TLR4-202ENST00000394487 CAMK2N1Q7Z7J9 78 aa3.77□□□□□ -1.81
TLR4-202ENST00000394487 R4GN34 69 aa3.76□□□□□ -1.81
TLR4-202ENST00000394487 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
TLR4-202ENST00000394487 M0QZ58 72 aa3.74□□□□□ -1.81
TLR4-202ENST00000394487 DYNC2H1Q8NCM8 4307 aaKnown RBP3.73□□□□□ -1.81
TLR4-202ENST00000394487 J3QL48 77 aa3.71□□□□□ -1.82
TLR4-202ENST00000394487 P0C880 135 aa3.7□□□□□ -1.82
TLR4-202ENST00000394487 KRTAP1-4P0C5Y4 121 aa3.69□□□□□ -1.82
TLR4-202ENST00000394487 DNAH7Q8WXX0 4024 aa3.69□□□□□ -1.82
TLR4-202ENST00000394487 DNAH1Q9P2D7 4330 aa3.67□□□□□ -1.82
TLR4-202ENST00000394487 TPRXLQ17RH7 258 aa3.66□□□□□ -1.82
TLR4-202ENST00000394487 PRKDCP78527 4128 aaKnown RBP3.63□□□□□ -1.83
TLR4-202ENST00000394487 HUWE1Q7Z6Z7 4374 aaKnown RBP3.62□□□□□ -1.83
TLR4-202ENST00000394487 DNAH9Q9NYC9 4486 aa3.62□□□□□ -1.83
TLR4-202ENST00000394487 KRTAP3-1Q9BYR8 98 aa3.62□□□□□ -1.83
TLR4-202ENST00000394487 DNHD1Q96M86 4753 aa3.61□□□□□ -1.83
TLR4-202ENST00000394487 DNAH6Q9C0G6 4158 aa3.61□□□□□ -1.83
TLR4-202ENST00000394487 KRTAP10-8P60410 259 aa3.61□□□□□ -1.83
TLR4-202ENST00000394487 Q5VSD8 79 aa3.6□□□□□ -1.83
TLR4-202ENST00000394487 PLAC4Q8WY50 150 aa3.6□□□□□ -1.83
TLR4-202ENST00000394487 DNAH10Q8IVF4 4471 aa3.59□□□□□ -1.84
TLR4-202ENST00000394487 LYSTQ99698 3801 aa3.58□□□□□ -1.84
TLR4-202ENST00000394487 KRTAP12-2P59991 146 aa3.58□□□□□ -1.84
TLR4-202ENST00000394487 KRTAP13-4Q3LI77 160 aa3.58□□□□□ -1.84
TLR4-202ENST00000394487 RPS29P62273 56 aaKnown RBP3.56□□□□□ -1.84
TLR4-202ENST00000394487 FRAS1Q86XX4 4008 aa3.54□□□□□ -1.84
TLR4-202ENST00000394487 M0R2T5 61 aa3.52□□□□□ -1.85
TLR4-202ENST00000394487 KRTAP21-3Q3LHN1 58 aa3.51□□□□□ -1.85
TLR4-202ENST00000394487 KRTAP10-6P60371 365 aaPredicted RBP3.5□□□□□ -1.85
TLR4-202ENST00000394487 XP32Q5T750 250 aa3.5□□□□□ -1.85
TLR4-202ENST00000394487 KRTAP12-1P59990 96 aa3.49□□□□□ -1.85
TLR4-202ENST00000394487 VPS13DQ5THJ4 4388 aa3.48□□□□□ -1.85
TLR4-202ENST00000394487 STARD9Q9P2P6 4700 aa3.47□□□□□ -1.85
TLR4-202ENST00000394487 ALMS1Q8TCU4 4167 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms