RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 MRPL34Q9BQ48 92 aaKnown RBP13.19□□□□□ -0.3
CLDND1-202ENST00000394180 UBE2DNLQ8IWF7 75 aa13.18□□□□□ -0.3
CLDND1-202ENST00000394180 WWC2-AS2Q96NR7 200 aa13.18□□□□□ -0.3
CLDND1-202ENST00000394180 A0A1B0GVX0 72 aa13.17□□□□□ -0.3
CLDND1-202ENST00000394180 CASC10Q5T4H9 136 aa13.16□□□□□ -0.3
CLDND1-202ENST00000394180 PRR26Q8N8Z3 221 aa13.15□□□□□ -0.31
CLDND1-202ENST00000394180 KMT2AQ03164 3969 aa13.14□□□□□ -0.31
CLDND1-202ENST00000394180 VPS13DQ5THJ4 4388 aa13.13□□□□□ -0.31
CLDND1-202ENST00000394180 DNAH10Q8IVF4 4471 aa13.12□□□□□ -0.31
CLDND1-202ENST00000394180 A0A096LNI7 61 aa13.11□□□□□ -0.31
CLDND1-202ENST00000394180 KRTAP1-5Q9BYS1 174 aa13.11□□□□□ -0.31
CLDND1-202ENST00000394180 ADM2Q7Z4H4 148 aa13.09□□□□□ -0.31
CLDND1-202ENST00000394180 RETNLBQ9BQ08 111 aa13.09□□□□□ -0.31
CLDND1-202ENST00000394180 A0A1B0GU69 56 aa13.07□□□□□ -0.32
CLDND1-202ENST00000394180 DMAC1Q96GE9 116 aa13.07□□□□□ -0.32
CLDND1-202ENST00000394180 CDK2AP2O75956 126 aa13.05□□□□□ -0.32
CLDND1-202ENST00000394180 KRTAP13-3Q3SY46 172 aa13.05□□□□□ -0.32
CLDND1-202ENST00000394180 UQCR11O14957 56 aa13.03□□□□□ -0.32
CLDND1-202ENST00000394180 IGHV6-1A0A0B4J1U7 121 aa13.01□□□□□ -0.33
CLDND1-202ENST00000394180 MIR22HGQ0VDD5 57 aa13.01□□□□□ -0.33
CLDND1-202ENST00000394180 KRTAP13-1Q8IUC0 172 aa12.99□□□□□ -0.33
CLDND1-202ENST00000394180 LY6G6CO95867 125 aa12.98□□□□□ -0.33
CLDND1-202ENST00000394180 NBDYA0A0U1RRE5 68 aa12.98□□□□□ -0.33
CLDND1-202ENST00000394180 ALMS1Q8TCU4 4167 aa12.95□□□□□ -0.34
CLDND1-202ENST00000394180 LINC00483Q53H64 154 aa12.95□□□□□ -0.34
CLDND1-202ENST00000394180 DNAH2Q9P225 4427 aa12.95□□□□□ -0.34
CLDND1-202ENST00000394180 KRTAP11-1Q8IUC1 163 aa12.94□□□□□ -0.34
CLDND1-202ENST00000394180 HYDINQ4G0P3 5121 aa12.92□□□□□ -0.34
CLDND1-202ENST00000394180 C14orf177Q52M58 125 aa12.91□□□□□ -0.34
CLDND1-202ENST00000394180 Q5W150 140 aa12.88□□□□□ -0.35
CLDND1-202ENST00000394180 CHTF8P0CG12 524 aa12.86□□□□□ -0.35
CLDND1-202ENST00000394180 CSAG1Q6PB30 78 aa12.86□□□□□ -0.35
CLDND1-202ENST00000394180 ZNF706Q9Y5V0 76 aaPredicted RBP12.85□□□□□ -0.35
CLDND1-202ENST00000394180 Q6ZRN7 208 aaPredicted RBP12.84□□□□□ -0.35
CLDND1-202ENST00000394180 SACSQ9NZJ4 4579 aa12.82□□□□□ -0.36
CLDND1-202ENST00000394180 DNAH6Q9C0G6 4158 aa12.82□□□□□ -0.36
CLDND1-202ENST00000394180 IGLV9-49A0A0B4J1Y8 123 aa12.81□□□□□ -0.36
CLDND1-202ENST00000394180 NOTCH2NLQ7Z3S9 236 aa12.8□□□□□ -0.36
CLDND1-202ENST00000394180 FRAS1Q86XX4 4008 aa12.78□□□□□ -0.36
CLDND1-202ENST00000394180 ZNF861PO60384 105 aa12.77□□□□□ -0.36
CLDND1-202ENST00000394180 KMT2CQ8NEZ4 4911 aaKnown RBP12.75□□□□□ -0.37
CLDND1-202ENST00000394180 FAM229AH3BQW9 127 aa12.74□□□□□ -0.37
CLDND1-202ENST00000394180 C1orf134Q5TEV5 83 aa12.74□□□□□ -0.37
CLDND1-202ENST00000394180 HECTD4Q9Y4D8 3996 aa12.72□□□□□ -0.37
CLDND1-202ENST00000394180 DNAH17Q9UFH2 4485 aa12.71□□□□□ -0.37
CLDND1-202ENST00000394180 IGKV2-30P06310 120 aa12.69□□□□□ -0.38
CLDND1-202ENST00000394180 A0A087WTM6 91 aa12.67□□□□□ -0.38
CLDND1-202ENST00000394180 IGLV7-43P04211 117 aa12.67□□□□□ -0.38
CLDND1-202ENST00000394180 FAT2Q9NYQ8 4349 aa12.65□□□□□ -0.38
CLDND1-202ENST00000394180 DNAH11Q96DT5 4516 aa12.59□□□□□ -0.39
CLDND1-202ENST00000394180 RYR2Q92736 4967 aa12.58□□□□□ -0.4
CLDND1-202ENST00000394180 KRTAP25-1Q3LHN0 102 aa12.56□□□□□ -0.4
CLDND1-202ENST00000394180 PKD1P98161 4303 aa12.55□□□□□ -0.4
CLDND1-202ENST00000394180 ROMO1P60602 79 aa12.53□□□□□ -0.4
CLDND1-202ENST00000394180 SPACA4Q8TDM5 124 aa12.51□□□□□ -0.41
CLDND1-202ENST00000394180 DNAH5Q8TE73 4624 aa12.5□□□□□ -0.41
CLDND1-202ENST00000394180 KRTAP10-2P60368 255 aa12.49□□□□□ -0.41
CLDND1-202ENST00000394180 A8MUU9 505 aa12.49□□□□□ -0.41
CLDND1-202ENST00000394180 SPINK6Q6UWN8 80 aa12.48□□□□□ -0.41
CLDND1-202ENST00000394180 IGLV5-52A0A0A0MRZ9 124 aa12.47□□□□□ -0.41
CLDND1-202ENST00000394180 PKHD1P08F94 4074 aa12.47□□□□□ -0.41
CLDND1-202ENST00000394180 IGKV2D-30A0A075B6S6 120 aa12.47□□□□□ -0.41
CLDND1-202ENST00000394180 RYR3Q15413 4870 aa12.46□□□□□ -0.41
CLDND1-202ENST00000394180 PANO1I0J062 215 aa12.46□□□□□ -0.42
CLDND1-202ENST00000394180 SRRM2Q9UQ35 2752 aaKnown RBP12.45□□□□□ -0.42
CLDND1-202ENST00000394180 SSBP3-AS1Q7Z2R9 100 aa12.42□□□□□ -0.42
CLDND1-202ENST00000394180 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.42□□□□□ -0.42
CLDND1-202ENST00000394180 PSORS1C2Q9UIG4 136 aa12.37□□□□□ -0.43
CLDND1-202ENST00000394180 DNAH8Q96JB1 4490 aa12.35□□□□□ -0.43
CLDND1-202ENST00000394180 LINC00304Q8N9R0 145 aa12.33□□□□□ -0.44
CLDND1-202ENST00000394180 KRTAP16-1A8MUX0 517 aa12.32□□□□□ -0.44
CLDND1-202ENST00000394180 KRTAP10-1P60331 282 aa12.3□□□□□ -0.44
CLDND1-202ENST00000394180 ANAPC11Q9NYG5 84 aa12.29□□□□□ -0.44
CLDND1-202ENST00000394180 A0A1B0GVY2 172 aa12.27□□□□□ -0.44
CLDND1-202ENST00000394180 LRP1BQ9NZR2 4599 aa12.27□□□□□ -0.45
CLDND1-202ENST00000394180 CIRBP-AS1Q8TBR5 109 aa12.27□□□□□ -0.45
CLDND1-202ENST00000394180 H0YAA0 97 aa12.26□□□□□ -0.45
CLDND1-202ENST00000394180 Q6ZSA8 131 aa12.26□□□□□ -0.45
CLDND1-202ENST00000394180 DYNC1H1Q14204 4646 aaKnown RBP12.22□□□□□ -0.45
CLDND1-202ENST00000394180 A0A1B0GU33 70 aa12.13□□□□□ -0.47
CLDND1-202ENST00000394180 K7ERS5 55 aa12.1□□□□□ -0.47
CLDND1-202ENST00000394180 APOBP04114 4563 aaKnown RBP12.08□□□□□ -0.48
CLDND1-202ENST00000394180 H1FX-AS1Q4G0G2 97 aa12.07□□□□□ -0.48
CLDND1-202ENST00000394180 SPINK1P00995 79 aa12.07□□□□□ -0.48
CLDND1-202ENST00000394180 P0C880 135 aa12.06□□□□□ -0.48
CLDND1-202ENST00000394180 VPS13BQ7Z7G8 4022 aa12.06□□□□□ -0.48
CLDND1-202ENST00000394180 EPPK1P58107 5090 aaKnown RBP12.02□□□□□ -0.48
CLDND1-202ENST00000394180 FAT1Q14517 4588 aa11.97□□□□□ -0.49
CLDND1-202ENST00000394180 SMR3BP02814 79 aaPredicted RBP11.96□□□□□ -0.49
CLDND1-202ENST00000394180 Q8N1X5 172 aa11.95□□□□□ -0.5
CLDND1-202ENST00000394180 TYMSOSQ8TAI1 123 aa11.94□□□□□ -0.5
CLDND1-202ENST00000394180 HSPG2P98160 4391 aa11.88□□□□□ -0.51
CLDND1-202ENST00000394180 KRTAP13-2Q52LG2 175 aa11.88□□□□□ -0.51
CLDND1-202ENST00000394180 KIAA1109Q2LD37 5005 aa11.83□□□□□ -0.52
CLDND1-202ENST00000394180 RYR1P21817 5038 aa11.79□□□□□ -0.52
CLDND1-202ENST00000394180 KRTAP10-4P60372 401 aaPredicted RBP11.74□□□□□ -0.53
CLDND1-202ENST00000394180 KRTAP17-1Q9BYP8 105 aa11.72□□□□□ -0.53
CLDND1-202ENST00000394180 COX6B2Q6YFQ2 88 aa11.72□□□□□ -0.53
CLDND1-202ENST00000394180 SPINT4Q6UDR6 99 aa11.71□□□□□ -0.53
CLDND1-202ENST00000394180 CRIPTQ9P021 101 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms