RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 DNAH10Q8IVF4 4471 aa11.1□□□□□ -0.63
SMARCC2-203ENST00000394023 CYP4F30PQ9H0H9 118 aa11.09□□□□□ -0.63
SMARCC2-203ENST00000394023 SPANXA2-OT1Q8N9U9 137 aa11.09□□□□□ -0.63
SMARCC2-203ENST00000394023 SPINK1P00995 79 aa11.08□□□□□ -0.64
SMARCC2-203ENST00000394023 LCE6AA0A183 80 aa11.07□□□□□ -0.64
SMARCC2-203ENST00000394023 CD164Q04900 197 aa11.06□□□□□ -0.64
SMARCC2-203ENST00000394023 FAM229AH3BQW9 127 aa11.06□□□□□ -0.64
SMARCC2-203ENST00000394023 PRR26Q8N8Z3 221 aa11.04□□□□□ -0.64
SMARCC2-203ENST00000394023 DNAH9Q9NYC9 4486 aa11.03□□□□□ -0.64
SMARCC2-203ENST00000394023 C1orf195Q5TG92 126 aa11.02□□□□□ -0.65
SMARCC2-203ENST00000394023 IGLV7-46A0A075B6I9 117 aa11.01□□□□□ -0.65
SMARCC2-203ENST00000394023 ACYP2P14621 99 aa11.01□□□□□ -0.65
SMARCC2-203ENST00000394023 Q8N9P0 234 aaPredicted RBP11.01□□□□□ -0.65
SMARCC2-203ENST00000394023 LINC00304Q8N9R0 145 aa11.01□□□□□ -0.65
SMARCC2-203ENST00000394023 C9orf92A6NGG3 77 aa10.98□□□□□ -0.65
SMARCC2-203ENST00000394023 PMAIP1Q13794 54 aa10.98□□□□□ -0.65
SMARCC2-203ENST00000394023 PLECQ15149 4684 aaKnown RBP10.97□□□□□ -0.65
SMARCC2-203ENST00000394023 C7orf65Q6ZTY9 151 aa10.97□□□□□ -0.65
SMARCC2-203ENST00000394023 Q1T7F1 81 aa10.95□□□□□ -0.66
SMARCC2-203ENST00000394023 Q5W150 140 aa10.95□□□□□ -0.66
SMARCC2-203ENST00000394023 CMYA5Q8N3K9 4069 aa10.95□□□□□ -0.66
SMARCC2-203ENST00000394023 DMBT1Q9UGM3 2413 aaPredicted RBP10.93□□□□□ -0.66
SMARCC2-203ENST00000394023 KRTAP13-2Q52LG2 175 aa10.93□□□□□ -0.66
SMARCC2-203ENST00000394023 LYSTQ99698 3801 aa10.91□□□□□ -0.66
SMARCC2-203ENST00000394023 HRES1P13985 223 aa10.89□□□□□ -0.67
SMARCC2-203ENST00000394023 SEC61GP60059 68 aa10.86□□□□□ -0.67
SMARCC2-203ENST00000394023 A0A1B0GU69 56 aa10.83□□□□□ -0.68
SMARCC2-203ENST00000394023 FLG2Q5D862 2391 aaPredicted RBP10.81□□□□□ -0.68
SMARCC2-203ENST00000394023 Q8N1X5 172 aa10.81□□□□□ -0.68
SMARCC2-203ENST00000394023 DNAH3Q8TD57 4116 aa10.81□□□□□ -0.68
SMARCC2-203ENST00000394023 Q5VV11 94 aa10.78□□□□□ -0.68
SMARCC2-203ENST00000394023 STARD9Q9P2P6 4700 aa10.75□□□□□ -0.69
SMARCC2-203ENST00000394023 Q6ZSA8 131 aa10.75□□□□□ -0.69
SMARCC2-203ENST00000394023 PRKDCP78527 4128 aaKnown RBP10.74□□□□□ -0.69
SMARCC2-203ENST00000394023 DNAH1Q9P2D7 4330 aa10.71□□□□□ -0.7
SMARCC2-203ENST00000394023 DNHD1Q96M86 4753 aa10.7□□□□□ -0.7
SMARCC2-203ENST00000394023 ASB16-AS1Q495Z4 193 aa10.7□□□□□ -0.7
SMARCC2-203ENST00000394023 KRTAP1-4P0C5Y4 121 aa10.69□□□□□ -0.7
SMARCC2-203ENST00000394023 A8MU10 97 aa10.64□□□□□ -0.71
SMARCC2-203ENST00000394023 LINC01558Q9Y6Z2 57 aa10.64□□□□□ -0.71
SMARCC2-203ENST00000394023 DNAH7Q8WXX0 4024 aa10.64□□□□□ -0.71
SMARCC2-203ENST00000394023 Q75L30 129 aa10.61□□□□□ -0.71
SMARCC2-203ENST00000394023 SPINK7P58062 85 aa10.6□□□□□ -0.71
SMARCC2-203ENST00000394023 KMT2AQ03164 3969 aa10.6□□□□□ -0.71
SMARCC2-203ENST00000394023 DMAC1Q96GE9 116 aa10.56□□□□□ -0.72
SMARCC2-203ENST00000394023 VPS13DQ5THJ4 4388 aa10.56□□□□□ -0.72
SMARCC2-203ENST00000394023 ATP11AUNQ6ZP68 121 aa10.56□□□□□ -0.72
SMARCC2-203ENST00000394023 DNAH11Q96DT5 4516 aa10.54□□□□□ -0.72
SMARCC2-203ENST00000394023 CDC42SE1Q9NRR8 79 aa10.54□□□□□ -0.72
SMARCC2-203ENST00000394023 KRTAP21-3Q3LHN1 58 aa10.5□□□□□ -0.73
SMARCC2-203ENST00000394023 UQCR11O14957 56 aa10.5□□□□□ -0.73
SMARCC2-203ENST00000394023 LCA10Q71F78 164 aa10.49□□□□□ -0.73
SMARCC2-203ENST00000394023 MIR22HGQ0VDD5 57 aa10.47□□□□□ -0.73
SMARCC2-203ENST00000394023 Q5VSD8 79 aa10.44□□□□□ -0.74
SMARCC2-203ENST00000394023 KRTAP16-1A8MUX0 517 aa10.4□□□□□ -0.74
SMARCC2-203ENST00000394023 KRTAP13-3Q3SY46 172 aa10.38□□□□□ -0.75
SMARCC2-203ENST00000394023 DNAH17Q9UFH2 4485 aa10.38□□□□□ -0.75
SMARCC2-203ENST00000394023 DNAH8Q96JB1 4490 aa10.35□□□□□ -0.75
SMARCC2-203ENST00000394023 FRAS1Q86XX4 4008 aa10.34□□□□□ -0.75
SMARCC2-203ENST00000394023 DNAH2Q9P225 4427 aa10.32□□□□□ -0.76
SMARCC2-203ENST00000394023 K7ERS5 55 aa10.31□□□□□ -0.76
SMARCC2-203ENST00000394023 RPS29P62273 56 aaKnown RBP10.31□□□□□ -0.76
SMARCC2-203ENST00000394023 KTN1-AS1Q86SY8 53 aa10.3□□□□□ -0.76
SMARCC2-203ENST00000394023 LRP1BQ9NZR2 4599 aa10.28□□□□□ -0.76
SMARCC2-203ENST00000394023 DYNC2H1Q8NCM8 4307 aaKnown RBP10.27□□□□□ -0.77
SMARCC2-203ENST00000394023 HECTD4Q9Y4D8 3996 aa10.24□□□□□ -0.77
SMARCC2-203ENST00000394023 DNAH6Q9C0G6 4158 aa10.23□□□□□ -0.77
SMARCC2-203ENST00000394023 A0A1B0GVY2 172 aa10.22□□□□□ -0.77
SMARCC2-203ENST00000394023 DNAH5Q8TE73 4624 aa10.22□□□□□ -0.77
SMARCC2-203ENST00000394023 A8MUU9 505 aa10.17□□□□□ -0.78
SMARCC2-203ENST00000394023 A0A1B0GU33 70 aa10.17□□□□□ -0.78
SMARCC2-203ENST00000394023 C20orf166-AS1Q96NR2 134 aa10.16□□□□□ -0.78
SMARCC2-203ENST00000394023 PRAC1Q96KF2 57 aa10.15□□□□□ -0.78
SMARCC2-203ENST00000394023 FAT1Q14517 4588 aa10.12□□□□□ -0.79
SMARCC2-203ENST00000394023 A0A0D9SG42 100 aa10.11□□□□□ -0.79
SMARCC2-203ENST00000394023 COX6B2Q6YFQ2 88 aa10.11□□□□□ -0.79
SMARCC2-203ENST00000394023 HYDINQ4G0P3 5121 aa10.1□□□□□ -0.79
SMARCC2-203ENST00000394023 J3QL48 77 aa10.07□□□□□ -0.8
SMARCC2-203ENST00000394023 A6NN06 94 aa10.06□□□□□ -0.8
SMARCC2-203ENST00000394023 SPATA8Q6RVD6 105 aa10.05□□□□□ -0.8
SMARCC2-203ENST00000394023 RBM12B-AS1Q9P1G2 102 aa10.03□□□□□ -0.8
SMARCC2-203ENST00000394023 VPS13BQ7Z7G8 4022 aa10.02□□□□□ -0.81
SMARCC2-203ENST00000394023 DYNC1H1Q14204 4646 aaKnown RBP10□□□□□ -0.81
SMARCC2-203ENST00000394023 ALMS1Q8TCU4 4167 aa10□□□□□ -0.81
SMARCC2-203ENST00000394023 S4R3F8 94 aa9.97□□□□□ -0.81
SMARCC2-203ENST00000394023 ADM2Q7Z4H4 148 aa9.95□□□□□ -0.82
SMARCC2-203ENST00000394023 RPL37P61927 97 aaKnown RBP9.94□□□□□ -0.82
SMARCC2-203ENST00000394023 H1FX-AS1Q4G0G2 97 aa9.94□□□□□ -0.82
SMARCC2-203ENST00000394023 KRTAP10-4P60372 401 aaPredicted RBP9.91□□□□□ -0.82
SMARCC2-203ENST00000394023 XP32Q5T750 250 aa9.9□□□□□ -0.82
SMARCC2-203ENST00000394023 KRTAP10-8P60410 259 aa9.89□□□□□ -0.83
SMARCC2-203ENST00000394023 PKHD1P08F94 4074 aa9.88□□□□□ -0.83
SMARCC2-203ENST00000394023 CRIPTQ9P021 101 aa9.85□□□□□ -0.83
SMARCC2-203ENST00000394023 CSAG1Q6PB30 78 aa9.84□□□□□ -0.83
SMARCC2-203ENST00000394023 LINC01554Q52M75 96 aa9.84□□□□□ -0.83
SMARCC2-203ENST00000394023 SPINT4Q6UDR6 99 aa9.83□□□□□ -0.84
SMARCC2-203ENST00000394023 KRTAP3-1Q9BYR8 98 aa9.83□□□□□ -0.84
SMARCC2-203ENST00000394023 SACSQ9NZJ4 4579 aa9.81□□□□□ -0.84
SMARCC2-203ENST00000394023 FAT2Q9NYQ8 4349 aa9.77□□□□□ -0.85
SMARCC2-203ENST00000394023 H0YAA0 97 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms