RNA–Protein interactions for RNA: ENST00000392919.4

GNPTAB-202, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best) BASIC

Gene GNPTAB, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-202ENST00000392919 DSCR10P59022 87 aa14.5□□□□□ -0.09
GNPTAB-202ENST00000392919 GTF2H5Q6ZYL4 71 aa14.49□□□□□ -0.09
GNPTAB-202ENST00000392919 KRTAP19-2Q3LHN2 52 aa14.48□□□□□ -0.09
GNPTAB-202ENST00000392919 Q75L30 129 aa14.46□□□□□ -0.09
GNPTAB-202ENST00000392919 J3KT08 172 aa14.44□□□□□ -0.1
GNPTAB-202ENST00000392919 LINC00313P59037 77 aa14.43□□□□□ -0.1
GNPTAB-202ENST00000392919 NOTCH2NLQ7Z3S9 236 aa14.43□□□□□ -0.1
GNPTAB-202ENST00000392919 IGHV6-1A0A0B4J1U7 121 aa14.41□□□□□ -0.1
GNPTAB-202ENST00000392919 C20orf166-AS1Q96NR2 134 aa14.41□□□□□ -0.1
GNPTAB-202ENST00000392919 A0A1B0GVX0 72 aa14.39□□□□□ -0.11
GNPTAB-202ENST00000392919 A8MUU9 505 aa14.38□□□□□ -0.11
GNPTAB-202ENST00000392919 KRTAP16-1A8MUX0 517 aa14.38□□□□□ -0.11
GNPTAB-202ENST00000392919 NREPQ16612 68 aa14.38□□□□□ -0.11
GNPTAB-202ENST00000392919 F8W1H4 67 aa14.35□□□□□ -0.11
GNPTAB-202ENST00000392919 C8orf87E5RJ46 101 aa14.32□□□□□ -0.12
GNPTAB-202ENST00000392919 MT1HP80294 61 aa14.32□□□□□ -0.12
GNPTAB-202ENST00000392919 KRTAP9-6A0A140TA67 174 aa14.31□□□□□ -0.12
GNPTAB-202ENST00000392919 ATP11AUNQ6ZP68 121 aa14.31□□□□□ -0.12
GNPTAB-202ENST00000392919 A8MWP4 228 aa14.3□□□□□ -0.12
GNPTAB-202ENST00000392919 NDUFB1O75438 58 aa14.29□□□□□ -0.12
GNPTAB-202ENST00000392919 IGKV3D-7A0A0C4DH55 119 aa14.28□□□□□ -0.12
GNPTAB-202ENST00000392919 ETDBQ3ZM63 59 aa14.25□□□□□ -0.13
GNPTAB-202ENST00000392919 LCE2DQ5TA82 110 aaPredicted RBP14.23□□□□□ -0.13
GNPTAB-202ENST00000392919 Q6ZVQ6 151 aa14.22□□□□□ -0.13
GNPTAB-202ENST00000392919 PRR15Q8IV56 129 aa14.21□□□□□ -0.13
GNPTAB-202ENST00000392919 C8orf17Q9NRJ1 99 aa14.2□□□□□ -0.14
GNPTAB-202ENST00000392919 LINC00846Q9NV44 126 aa14.18□□□□□ -0.14
GNPTAB-202ENST00000392919 BPY2O14599 106 aa14.16□□□□□ -0.14
GNPTAB-202ENST00000392919 K7EQZ3 153 aa14.13□□□□□ -0.15
GNPTAB-202ENST00000392919 A0A1B0GV90 55 aa14.11□□□□□ -0.15
GNPTAB-202ENST00000392919 Q8N9P0 234 aaPredicted RBP14.09□□□□□ -0.15
GNPTAB-202ENST00000392919 UBL5Q9BZL1 73 aa14.09□□□□□ -0.15
GNPTAB-202ENST00000392919 MMP24-AS1A0A0U1RRL7 71 aa14.08□□□□□ -0.16
GNPTAB-202ENST00000392919 COX6B2Q6YFQ2 88 aa14.06□□□□□ -0.16
GNPTAB-202ENST00000392919 LORP23490 312 aaPredicted RBP14.05□□□□□ -0.16
GNPTAB-202ENST00000392919 KRTAP10-6P60371 365 aaPredicted RBP14.05□□□□□ -0.16
GNPTAB-202ENST00000392919 Q8N9L7 120 aa14.03□□□□□ -0.16
GNPTAB-202ENST00000392919 TMEM254Q8TBM7 123 aa14□□□□□ -0.17
GNPTAB-202ENST00000392919 M0R2T5 61 aa13.99□□□□□ -0.17
GNPTAB-202ENST00000392919 ZCCHC13Q8WW36 166 aaKnown RBP13.98□□□□□ -0.17
GNPTAB-202ENST00000392919 MRPL34Q9BQ48 92 aaKnown RBP13.98□□□□□ -0.17
GNPTAB-202ENST00000392919 hDV103S1A0JD37 113 aa13.97□□□□□ -0.17
GNPTAB-202ENST00000392919 FLGP20930 4061 aaPredicted RBP13.95□□□□□ -0.18
GNPTAB-202ENST00000392919 CRCT1Q9UGL9 99 aa13.94□□□□□ -0.18
GNPTAB-202ENST00000392919 WFDC13Q8IUB5 93 aa13.88□□□□□ -0.19
GNPTAB-202ENST00000392919 ACYP1P07311 99 aa13.87□□□□□ -0.19
GNPTAB-202ENST00000392919 FAM240AA0A1B0GVK7 77 aa13.85□□□□□ -0.19
GNPTAB-202ENST00000392919 CXCL6P80162 114 aa13.85□□□□□ -0.19
GNPTAB-202ENST00000392919 CASC2Q6XLA1 102 aa13.85□□□□□ -0.19
GNPTAB-202ENST00000392919 FSIP2Q5CZC0 6907 aa13.85□□□□□ -0.19
GNPTAB-202ENST00000392919 NDUFS5O43920 106 aa13.82□□□□□ -0.2
GNPTAB-202ENST00000392919 HRES1P13985 223 aa13.8□□□□□ -0.2
GNPTAB-202ENST00000392919 HCG22E2RYF7 251 aa13.78□□□□□ -0.2
GNPTAB-202ENST00000392919 SPINK7P58062 85 aa13.77□□□□□ -0.21
GNPTAB-202ENST00000392919 MPLKIPQ8TAP9 179 aa13.75□□□□□ -0.21
GNPTAB-202ENST00000392919 Q5W150 140 aa13.7□□□□□ -0.22
GNPTAB-202ENST00000392919 RBM12B-AS1Q9P1G2 102 aa13.65□□□□□ -0.22
GNPTAB-202ENST00000392919 ATP5EP2Q5VTU8 51 aa13.64□□□□□ -0.23
GNPTAB-202ENST00000392919 FAM236DA0A1B0GTK5 79 aa13.6□□□□□ -0.23
GNPTAB-202ENST00000392919 FAM236CP0DP71 79 aa13.6□□□□□ -0.23
GNPTAB-202ENST00000392919 LINC00643Q86TS7 51 aa13.58□□□□□ -0.24
GNPTAB-202ENST00000392919 KRTAP9-8Q9BYQ0 159 aa13.54□□□□□ -0.24
GNPTAB-202ENST00000392919 IGKV2D-30A0A075B6S6 120 aa13.52□□□□□ -0.25
GNPTAB-202ENST00000392919 J3QR89 54 aa13.52□□□□□ -0.25
GNPTAB-202ENST00000392919 IGKV2-30P06310 120 aa13.52□□□□□ -0.25
GNPTAB-202ENST00000392919 HIST1H4AP62805 103 aaKnown RBP13.51□□□□□ -0.25
GNPTAB-202ENST00000392919 C7orf65Q6ZTY9 151 aa13.49□□□□□ -0.25
GNPTAB-202ENST00000392919 TP53AIP1Q9HCN2 124 aa13.49□□□□□ -0.25
GNPTAB-202ENST00000392919 A0A087WVE0 104 aa13.41□□□□□ -0.26
GNPTAB-202ENST00000392919 MT2AP02795 61 aa13.33□□□□□ -0.28
GNPTAB-202ENST00000392919 C4orf26Q17RF5 130 aa13.25□□□□□ -0.29
GNPTAB-202ENST00000392919 TRAV22A0A0B4J277 110 aa13.24□□□□□ -0.29
GNPTAB-202ENST00000392919 K7ERU9 68 aa13.24□□□□□ -0.29
GNPTAB-202ENST00000392919 UQCRQO14949 82 aa13.23□□□□□ -0.29
GNPTAB-202ENST00000392919 MT1FP04733 61 aa13.23□□□□□ -0.29
GNPTAB-202ENST00000392919 H1FX-AS1Q4G0G2 97 aa13.22□□□□□ -0.29
GNPTAB-202ENST00000392919 USH2AO75445 5202 aa13.21□□□□□ -0.29
GNPTAB-202ENST00000392919 CYP4F30PQ9H0H9 118 aa13.17□□□□□ -0.3
GNPTAB-202ENST00000392919 SSPOA2VEC9 5147 aa13.13□□□□□ -0.31
GNPTAB-202ENST00000392919 LOC101927531A0A1B0GV80 90 aa13.13□□□□□ -0.31
GNPTAB-202ENST00000392919 H0Y9P7 68 aa13.13□□□□□ -0.31
GNPTAB-202ENST00000392919 KRTAP10-10P60014 251 aa13.12□□□□□ -0.31
GNPTAB-202ENST00000392919 OCR1Q9BZK8 76 aa13.12□□□□□ -0.31
GNPTAB-202ENST00000392919 KRTAP9-3Q9BYQ3 159 aa13.11□□□□□ -0.31
GNPTAB-202ENST00000392919 KRTAP3-1Q9BYR8 98 aa13.11□□□□□ -0.31
GNPTAB-202ENST00000392919 LCE2BO14633 110 aa13.1□□□□□ -0.31
GNPTAB-202ENST00000392919 MT-ATP8P03928 68 aa13.09□□□□□ -0.31
GNPTAB-202ENST00000392919 ATOX1O00244 68 aa13.08□□□□□ -0.32
GNPTAB-202ENST00000392919 C1orf64Q8NEQ6 169 aa13.06□□□□□ -0.32
GNPTAB-202ENST00000392919 IMUPQ9GZP8 106 aa13.05□□□□□ -0.32
GNPTAB-202ENST00000392919 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.99□□□□□ -0.33
GNPTAB-202ENST00000392919 SCGB1A1P11684 91 aa12.97□□□□□ -0.33
GNPTAB-202ENST00000392919 LINC00208Q96KT6 92 aa12.96□□□□□ -0.33
GNPTAB-202ENST00000392919 MP68P56378 58 aa12.93□□□□□ -0.34
GNPTAB-202ENST00000392919 C5orf47Q569G3 176 aa12.93□□□□□ -0.34
GNPTAB-202ENST00000392919 KRTAP19-1Q8IUB9 90 aa12.92□□□□□ -0.34
GNPTAB-202ENST00000392919 KRTAP9-7A8MTY7 169 aa12.86□□□□□ -0.35
GNPTAB-202ENST00000392919 KLKP1Q107X0 134 aa12.86□□□□□ -0.35
GNPTAB-202ENST00000392919 S4R3F8 94 aa12.86□□□□□ -0.35
GNPTAB-202ENST00000392919 FCGBPQ9Y6R7 5405 aaPredicted RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms