RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.74□□□□□ -0.53
CCDC50-202ENST00000392456 PKD1P98161 4303 aa11.73□□□□□ -0.53
CCDC50-202ENST00000392456 IGLV1-50A0A075B6I6 118 aa11.73□□□□□ -0.53
CCDC50-202ENST00000392456 WFDC13Q8IUB5 93 aa11.73□□□□□ -0.53
CCDC50-202ENST00000392456 SPRR4Q96PI1 79 aa11.73□□□□□ -0.53
CCDC50-202ENST00000392456 KRTAP10-2P60368 255 aa11.7□□□□□ -0.54
CCDC50-202ENST00000392456 KRTAP11-1Q8IUC1 163 aa11.7□□□□□ -0.54
CCDC50-202ENST00000392456 A0A087X002 238 aa11.69□□□□□ -0.54
CCDC50-202ENST00000392456 DEFB105AQ8NG35 78 aa11.69□□□□□ -0.54
CCDC50-202ENST00000392456 C1orf137Q5JT78 98 aa11.69□□□□□ -0.54
CCDC50-202ENST00000392456 DNAH8Q96JB1 4490 aa11.68□□□□□ -0.54
CCDC50-202ENST00000392456 IGLV5-52A0A0A0MRZ9 124 aa11.68□□□□□ -0.54
CCDC50-202ENST00000392456 RETNLBQ9BQ08 111 aa11.68□□□□□ -0.54
CCDC50-202ENST00000392456 SRRM2Q9UQ35 2752 aaKnown RBP11.67□□□□□ -0.54
CCDC50-202ENST00000392456 KRTAP29-1A8MX34 341 aaPredicted RBP11.67□□□□□ -0.54
CCDC50-202ENST00000392456 KRTAP4-16G5E9R7 235 aaPredicted RBP11.66□□□□□ -0.54
CCDC50-202ENST00000392456 SPACA4Q8TDM5 124 aa11.66□□□□□ -0.54
CCDC50-202ENST00000392456 RYR2Q92736 4967 aa11.65□□□□□ -0.54
CCDC50-202ENST00000392456 PKHD1P08F94 4074 aa11.64□□□□□ -0.55
CCDC50-202ENST00000392456 H0Y9J4 135 aa11.64□□□□□ -0.55
CCDC50-202ENST00000392456 SPRR1AP35321 89 aa11.63□□□□□ -0.55
CCDC50-202ENST00000392456 ZNF706Q9Y5V0 76 aaPredicted RBP11.6□□□□□ -0.55
CCDC50-202ENST00000392456 REG3GQ6UW15 175 aa11.59□□□□□ -0.55
CCDC50-202ENST00000392456 Q6ZRX8 168 aa11.58□□□□□ -0.56
CCDC50-202ENST00000392456 DHRS4-AS1Q9P1J3 65 aa11.55□□□□□ -0.56
CCDC50-202ENST00000392456 PRLHP81277 87 aa11.54□□□□□ -0.56
CCDC50-202ENST00000392456 CSAG1Q6PB30 78 aa11.54□□□□□ -0.56
CCDC50-202ENST00000392456 KRTAP10-1P60331 282 aa11.52□□□□□ -0.56
CCDC50-202ENST00000392456 LRP1BQ9NZR2 4599 aa11.51□□□□□ -0.57
CCDC50-202ENST00000392456 HRES1P13985 223 aa11.5□□□□□ -0.57
CCDC50-202ENST00000392456 RYR3Q15413 4870 aa11.49□□□□□ -0.57
CCDC50-202ENST00000392456 PCOTHQ58A44 107 aa11.48□□□□□ -0.57
CCDC50-202ENST00000392456 RPL37AP61513 92 aaKnown RBP11.46□□□□□ -0.57
CCDC50-202ENST00000392456 CIRBP-AS1Q8TBR5 109 aa11.46□□□□□ -0.57
CCDC50-202ENST00000392456 DYNC1H1Q14204 4646 aaKnown RBP11.43□□□□□ -0.58
CCDC50-202ENST00000392456 Q6ZSA8 131 aa11.43□□□□□ -0.58
CCDC50-202ENST00000392456 PSORS1C2Q9UIG4 136 aa11.43□□□□□ -0.58
CCDC50-202ENST00000392456 SPATA8Q6RVD6 105 aa11.41□□□□□ -0.58
CCDC50-202ENST00000392456 KRTAP13-1Q8IUC0 172 aa11.4□□□□□ -0.58
CCDC50-202ENST00000392456 A0A1B0GVY2 172 aa11.38□□□□□ -0.59
CCDC50-202ENST00000392456 VPS13BQ7Z7G8 4022 aa11.36□□□□□ -0.59
CCDC50-202ENST00000392456 IGHV6-1A0A0B4J1U7 121 aa11.35□□□□□ -0.59
CCDC50-202ENST00000392456 A0A0G2JQZ4 141 aa11.35□□□□□ -0.59
CCDC50-202ENST00000392456 A0A087WSZ3 146 aa11.34□□□□□ -0.59
CCDC50-202ENST00000392456 IGFL1Q6UW32 110 aa11.33□□□□□ -0.6
CCDC50-202ENST00000392456 ROMO1P60602 79 aa11.32□□□□□ -0.6
CCDC50-202ENST00000392456 A8MWP4 228 aa11.3□□□□□ -0.6
CCDC50-202ENST00000392456 APOBP04114 4563 aaKnown RBP11.28□□□□□ -0.6
CCDC50-202ENST00000392456 MMP24-AS1A0A0U1RRL7 71 aa11.26□□□□□ -0.61
CCDC50-202ENST00000392456 ZNF861PO60384 105 aa11.26□□□□□ -0.61
CCDC50-202ENST00000392456 FAT1Q14517 4588 aa11.25□□□□□ -0.61
CCDC50-202ENST00000392456 IGLV7-43P04211 117 aa11.24□□□□□ -0.61
CCDC50-202ENST00000392456 IGLV8-61A0A075B6I0 122 aa11.23□□□□□ -0.61
CCDC50-202ENST00000392456 ANAPC11Q9NYG5 84 aa11.23□□□□□ -0.61
CCDC50-202ENST00000392456 MIR22HGQ0VDD5 57 aa11.23□□□□□ -0.61
CCDC50-202ENST00000392456 SPRR1BP22528 89 aa11.2□□□□□ -0.62
CCDC50-202ENST00000392456 TP53AIP1Q9HCN2 124 aa11.2□□□□□ -0.62
CCDC50-202ENST00000392456 LINC00472Q9H8W2 130 aa11.19□□□□□ -0.62
CCDC50-202ENST00000392456 A0A0A0MQY5 61 aa11.18□□□□□ -0.62
CCDC50-202ENST00000392456 SMR3BP02814 79 aaPredicted RBP11.17□□□□□ -0.62
CCDC50-202ENST00000392456 A0A1B0GU69 56 aa11.16□□□□□ -0.62
CCDC50-202ENST00000392456 UQCR11O14957 56 aa11.13□□□□□ -0.63
CCDC50-202ENST00000392456 LINC00483Q53H64 154 aa11.13□□□□□ -0.63
CCDC50-202ENST00000392456 IGLV9-49A0A0B4J1Y8 123 aa11.11□□□□□ -0.63
CCDC50-202ENST00000392456 EPPK1P58107 5090 aaKnown RBP11.09□□□□□ -0.63
CCDC50-202ENST00000392456 KRTAP25-1Q3LHN0 102 aa11.09□□□□□ -0.63
CCDC50-202ENST00000392456 P0C880 135 aa11.07□□□□□ -0.64
CCDC50-202ENST00000392456 ACYP2P14621 99 aa11.06□□□□□ -0.64
CCDC50-202ENST00000392456 HSPG2P98160 4391 aa11.04□□□□□ -0.64
CCDC50-202ENST00000392456 KIAA1109Q2LD37 5005 aa11□□□□□ -0.65
CCDC50-202ENST00000392456 KRTAP10-4P60372 401 aaPredicted RBP10.99□□□□□ -0.65
CCDC50-202ENST00000392456 KRTAP1-4P0C5Y4 121 aa10.98□□□□□ -0.65
CCDC50-202ENST00000392456 RYR1P21817 5038 aa10.97□□□□□ -0.65
CCDC50-202ENST00000392456 C8orf17Q9NRJ1 99 aa10.95□□□□□ -0.66
CCDC50-202ENST00000392456 KRTAP13-2Q52LG2 175 aa10.95□□□□□ -0.66
CCDC50-202ENST00000392456 DMAC1Q96GE9 116 aa10.94□□□□□ -0.66
CCDC50-202ENST00000392456 NOTCH2NLQ7Z3S9 236 aa10.93□□□□□ -0.66
CCDC50-202ENST00000392456 KRTAP17-1Q9BYP8 105 aa10.92□□□□□ -0.66
CCDC50-202ENST00000392456 SPINK6Q6UWN8 80 aa10.9□□□□□ -0.67
CCDC50-202ENST00000392456 A8MUU9 505 aa10.87□□□□□ -0.67
CCDC50-202ENST00000392456 Q96NJ1 140 aa10.87□□□□□ -0.67
CCDC50-202ENST00000392456 MRPL34Q9BQ48 92 aaKnown RBP10.85□□□□□ -0.67
CCDC50-202ENST00000392456 CDK2AP2O75956 126 aa10.83□□□□□ -0.68
CCDC50-202ENST00000392456 SSBP3-AS1Q7Z2R9 100 aa10.83□□□□□ -0.68
CCDC50-202ENST00000392456 LRP1Q07954 4544 aaKnown RBP10.82□□□□□ -0.68
CCDC50-202ENST00000392456 KRTAP13-3Q3SY46 172 aa10.81□□□□□ -0.68
CCDC50-202ENST00000392456 Q5VSD8 79 aa10.78□□□□□ -0.68
CCDC50-202ENST00000392456 PKHD1L1Q86WI1 4243 aa10.78□□□□□ -0.68
CCDC50-202ENST00000392456 A0A1B0GVX0 72 aa10.78□□□□□ -0.68
CCDC50-202ENST00000392456 FAM229AH3BQW9 127 aa10.78□□□□□ -0.68
CCDC50-202ENST00000392456 Q5W150 140 aa10.77□□□□□ -0.69
CCDC50-202ENST00000392456 FLG2Q5D862 2391 aaPredicted RBP10.76□□□□□ -0.69
CCDC50-202ENST00000392456 LINC00304Q8N9R0 145 aa10.75□□□□□ -0.69
CCDC50-202ENST00000392456 TYMSOSQ8TAI1 123 aa10.75□□□□□ -0.69
CCDC50-202ENST00000392456 MYCBP2O75592 4640 aa10.71□□□□□ -0.7
CCDC50-202ENST00000392456 KRTAP16-1A8MUX0 517 aa10.66□□□□□ -0.7
CCDC50-202ENST00000392456 TNXBP22105 4242 aa10.66□□□□□ -0.7
CCDC50-202ENST00000392456 Q8N1X5 172 aa10.62□□□□□ -0.71
CCDC50-202ENST00000392456 FAT3Q8TDW7 4589 aa10.62□□□□□ -0.71
CCDC50-202ENST00000392456 C20orf166-AS1Q96NR2 134 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms