RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 TJP1Q07157 1748 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 DDX60LQ5H9U9 1706 aaKnown RBP0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 PARP4Q9UKK3 1724 aaKnown RBP0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 K7EMI3 77 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 M0R2T5 61 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 DEFB130BP0DP73 79 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 DEFB130AP0DP74 79 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 FCER1GP30273 86 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 DEFB135Q30KP9 77 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 SMIM5Q71RC9 77 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 MUC17Q685J3 4493 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 NBEAL2Q6ZNJ1 2754 aa0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 PRRC2CQ9Y520 2896 aaKnown RBP0.14□□□□□ -2.39
TRAJ3-201ENST00000390534 MDN1Q9NU22 5596 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 EIF2AK4Q9P2K8 1649 aaKnown RBP0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 C4AP0C0L4 1744 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 C4BP0C0L5 1744 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 NRAPQ86VF7 1730 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 HECTD1Q9ULT8 2610 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 NF1P21359 2839 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 PHGR1C9JFL3 82 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 LYNX1G3V0Z9 82 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 IAPPP10997 89 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 DEFB114Q30KQ6 69 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 INO80Q9ULG1 1556 aaPredicted RBP0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 NHSQ6T4R5 1651 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 NBASA2RRP1 2371 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 UTP20O75691 2785 aaKnown RBP0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 PKHD1P08F94 4074 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 MUC12Q9UKN1 5478 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 FRYLO94915 3013 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 AKAP13Q12802 2813 aa0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 CICQ96RK0 1608 aaPredicted RBP0.13□□□□□ -2.39
TRAJ3-201ENST00000390534 ADGRG4Q8IZF6 3080 aa0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 MUC5ACP98088 5654 aa0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 CREBBPQ92793 2442 aa0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 PKHD1L1Q86WI1 4243 aa0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 M0R1W7 72 aa0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 NCBP2-AS2Q69YL0 99 aa0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 NMES1Q9C002 83 aa0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 MUC5BQ9HC84 5762 aaPredicted RBP0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 HECTD4Q9Y4D8 3996 aa0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 MXRA5Q9NR99 2828 aa0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 ZANQ9Y493 2812 aa0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 ABCC6O95255 1503 aa0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 CFAP46Q8IYW2 2715 aa0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 MAST4O15021 2626 aa0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 CACNA1AO00555 2505 aa0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 KALRNO60229 2985 aa0.12□□□□□ -2.39
TRAJ3-201ENST00000390534 TENM2Q9NT68 2774 aa0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 DNAH3Q8TD57 4116 aa0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 DMXL2Q8TDJ6 3036 aa0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 THOC2Q8NI27 1593 aaKnown RBP0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 LYSTQ99698 3801 aa0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 TEP1Q99973 2627 aaKnown RBP0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 DNAH7Q8WXX0 4024 aa0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 ACANP16112 2415 aa0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 ITPR1Q14643 2758 aa0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 H0YGG7 62 aa0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 MINOS1Q5TGZ0 78 aa0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 ABCA6Q8N139 1617 aa0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 COL7A1Q02388 2944 aa0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 ATMQ13315 3056 aa0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 CRYBG3Q68DQ2 2970 aa0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 MYO9AB2RTY4 2548 aa0.11□□□□□ -2.39
TRAJ3-201ENST00000390534 PCNX1Q96RV3 2341 aa0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 MYO18BQ8IUG5 2567 aa0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 MAP1AP78559 2803 aaPredicted RBP0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 FSIP2Q5CZC0 6907 aa0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 PKD1L2Q7Z442 2459 aa0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 DEPDC5O75140 1603 aa0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 CCDC180Q9P1Z9 1646 aa0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 TEX15Q9BXT5 2789 aa0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 CPS1P31327 1500 aa0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 IGIPA6NJ69 53 aa0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 SPRR2DP22532 72 aa0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 RPS27P42677 84 aaKnown RBP0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 SERF2P84101 59 aa0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 RPS27LQ71UM5 84 aaKnown RBP0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 FLNBO75369 2602 aaKnown RBP0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 FLNAP21333 2647 aaKnown RBP0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 PLXNC1O60486 1568 aa0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 GLI2P10070 1586 aa0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 GCN1Q92616 2671 aaKnown RBP0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 NSD1Q96L73 2696 aaPredicted RBP0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 HMCN1Q96RW7 5635 aa0.1□□□□□ -2.39
TRAJ3-201ENST00000390534 NIPBLQ6KC79 2804 aaeCLIP0.09□□□□□ -2.39
TRAJ3-201ENST00000390534 RNF17Q9BXT8 1623 aaKnown RBP0.09□□□□□ -2.39
TRAJ3-201ENST00000390534 STAB1Q9NY15 2570 aa0.09□□□□□ -2.39
TRAJ3-201ENST00000390534 LRBAP50851 2863 aa0.09□□□□□ -2.39
TRAJ3-201ENST00000390534 TGP01266 2768 aa0.09□□□□□ -2.39
TRAJ3-201ENST00000390534 DNAH6Q9C0G6 4158 aa0.09□□□□□ -2.39
TRAJ3-201ENST00000390534 TACC2O95359 2948 aa0.09□□□□□ -2.39
TRAJ3-201ENST00000390534 AHNAK2Q8IVF2 5795 aa0.09□□□□□ -2.39
TRAJ3-201ENST00000390534 WT1-ASQ06250 92 aa0.09□□□□□ -2.4
TRAJ3-201ENST00000390534 C6orf48Q9UBA6 75 aa0.09□□□□□ -2.4
TRAJ3-201ENST00000390534 S4R3F8 94 aa0.09□□□□□ -2.4
TRAJ3-201ENST00000390534 SETD2Q9BYW2 2564 aaPredicted RBP0.09□□□□□ -2.4
TRAJ3-201ENST00000390534 EPG5Q9HCE0 2579 aa0.09□□□□□ -2.4
TRAJ3-201ENST00000390534 VPS13BQ7Z7G8 4022 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms