RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 SNHG12Q9BXW3 62 aa4.67□□□□□ -1.66
IFT88-203ENST00000389373 M0R143 59 aa4.66□□□□□ -1.66
IFT88-203ENST00000389373 DNAL4O96015 105 aa4.66□□□□□ -1.66
IFT88-203ENST00000389373 TSTD3H0UI37 97 aa4.65□□□□□ -1.67
IFT88-203ENST00000389373 H3BQ85 93 aa4.65□□□□□ -1.67
IFT88-203ENST00000389373 TRIAP1O43715 76 aa4.65□□□□□ -1.67
IFT88-203ENST00000389373 NOTCH2NLQ7Z3S9 236 aa4.65□□□□□ -1.67
IFT88-203ENST00000389373 MTURNQ8N3F0 131 aa4.65□□□□□ -1.67
IFT88-203ENST00000389373 H3BUT2 72 aa4.64□□□□□ -1.67
IFT88-203ENST00000389373 K7ERJ3 54 aa4.64□□□□□ -1.67
IFT88-203ENST00000389373 A8MWP4 228 aa4.63□□□□□ -1.67
IFT88-203ENST00000389373 SS18L2Q9UHA2 77 aa4.63□□□□□ -1.67
IFT88-203ENST00000389373 LINC00313P59037 77 aa4.62□□□□□ -1.67
IFT88-203ENST00000389373 FAM218AQ96MZ4 157 aa4.62□□□□□ -1.67
IFT88-203ENST00000389373 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
IFT88-203ENST00000389373 SCGB1C2P0DMR2 95 aa4.61□□□□□ -1.67
IFT88-203ENST00000389373 FABP2P12104 132 aa4.61□□□□□ -1.67
IFT88-203ENST00000389373 SIGMAR1Q99720 223 aa4.61□□□□□ -1.67
IFT88-203ENST00000389373 ORMDL1Q9P0S3 153 aa4.61□□□□□ -1.67
IFT88-203ENST00000389373 NDUFV3P56181 108 aaKnown RBP4.6□□□□□ -1.67
IFT88-203ENST00000389373 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
IFT88-203ENST00000389373 A0A087WSZ3 146 aa4.59□□□□□ -1.67
IFT88-203ENST00000389373 TMEM256-PLSCR3K7ERE1 68 aa4.59□□□□□ -1.67
IFT88-203ENST00000389373 LYRM7Q5U5X0 104 aa4.59□□□□□ -1.67
IFT88-203ENST00000389373 NEBP20929 6669 aa4.58□□□□□ -1.68
IFT88-203ENST00000389373 H3BMG7 143 aa4.58□□□□□ -1.68
IFT88-203ENST00000389373 TRACP01848 142 aa4.58□□□□□ -1.68
IFT88-203ENST00000389373 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
IFT88-203ENST00000389373 LOC105371267A0A1B0GV96 52 aa4.57□□□□□ -1.68
IFT88-203ENST00000389373 TEN1Q86WV5 123 aa4.57□□□□□ -1.68
IFT88-203ENST00000389373 MUC12Q9UKN1 5478 aa4.56□□□□□ -1.68
IFT88-203ENST00000389373 A6NN06 94 aa4.55□□□□□ -1.68
IFT88-203ENST00000389373 IGKV4-1P06312 121 aa4.55□□□□□ -1.68
IFT88-203ENST00000389373 UBE2V1Q13404 147 aa4.55□□□□□ -1.68
IFT88-203ENST00000389373 ATXN8Q156A1 80 aa4.55□□□□□ -1.68
IFT88-203ENST00000389373 BATFQ16520 125 aa4.55□□□□□ -1.68
IFT88-203ENST00000389373 ANKRD29Q8N6D5 301 aa4.54□□□□□ -1.68
IFT88-203ENST00000389373 TRBV7-4A0A0J9YYF1 115 aa4.52□□□□□ -1.69
IFT88-203ENST00000389373 SPINK7P58062 85 aa4.52□□□□□ -1.69
IFT88-203ENST00000389373 DSCR8Q96T75 97 aa4.52□□□□□ -1.69
IFT88-203ENST00000389373 IGHV6-1A0A0B4J1U7 121 aa4.51□□□□□ -1.69
IFT88-203ENST00000389373 A0A1B0GV72 72 aa4.51□□□□□ -1.69
IFT88-203ENST00000389373 KRTAP2-3P0C7H8 128 aa4.51□□□□□ -1.69
IFT88-203ENST00000389373 BAALC-AS2P0C853 105 aa4.51□□□□□ -1.69
IFT88-203ENST00000389373 RBM3P98179 157 aaKnown RBP4.51□□□□□ -1.69
IFT88-203ENST00000389373 C21orf62-AS1Q17RA5 79 aa4.51□□□□□ -1.69
IFT88-203ENST00000389373 DEFB116Q30KQ4 102 aa4.51□□□□□ -1.69
IFT88-203ENST00000389373 KRTAP2-4Q9BYR9 128 aa4.51□□□□□ -1.69
IFT88-203ENST00000389373 CCKP06307 115 aa4.5□□□□□ -1.69
IFT88-203ENST00000389373 NAA38Q9BRA0 125 aaKnown RBP4.5□□□□□ -1.69
IFT88-203ENST00000389373 A0A1W2PNM2 257 aa4.49□□□□□ -1.69
IFT88-203ENST00000389373 JMJD7-PLA2G4BH0Y9G9 81 aa4.49□□□□□ -1.69
IFT88-203ENST00000389373 C9orf118A6NHY6 69 aa4.48□□□□□ -1.69
IFT88-203ENST00000389373 C9JAW5 83 aa4.48□□□□□ -1.69
IFT88-203ENST00000389373 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
IFT88-203ENST00000389373 WFDC13Q8IUB5 93 aa4.48□□□□□ -1.69
IFT88-203ENST00000389373 PDE6GP18545 87 aa4.47□□□□□ -1.69
IFT88-203ENST00000389373 ZCCHC13Q8WW36 166 aaKnown RBP4.47□□□□□ -1.69
IFT88-203ENST00000389373 VPS25Q9BRG1 176 aa4.47□□□□□ -1.69
IFT88-203ENST00000389373 A0A1W2PPM0 123 aa4.46□□□□□ -1.7
IFT88-203ENST00000389373 KRTAP5-9P26371 169 aa4.46□□□□□ -1.7
IFT88-203ENST00000389373 A0A1B0GW54 56 aa4.45□□□□□ -1.7
IFT88-203ENST00000389373 COL5A1-AS1Q5SY13 56 aa4.45□□□□□ -1.7
IFT88-203ENST00000389373 H3BT86 120 aa4.44□□□□□ -1.7
IFT88-203ENST00000389373 TAX1BP3O14907 124 aa4.44□□□□□ -1.7
IFT88-203ENST00000389373 LINC00472Q9H8W2 130 aa4.44□□□□□ -1.7
IFT88-203ENST00000389373 LOC110117498A0A087WWA1 95 aa4.43□□□□□ -1.7
IFT88-203ENST00000389373 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
IFT88-203ENST00000389373 SPCS1Q9Y6A9 102 aa4.42□□□□□ -1.7
IFT88-203ENST00000389373 C8orf87E5RJ46 101 aa4.41□□□□□ -1.7
IFT88-203ENST00000389373 J3KT08 172 aa4.41□□□□□ -1.7
IFT88-203ENST00000389373 Q6ZQT0 140 aa4.41□□□□□ -1.7
IFT88-203ENST00000389373 MT1BP07438 61 aa4.4□□□□□ -1.71
IFT88-203ENST00000389373 H1FX-AS1Q4G0G2 97 aa4.4□□□□□ -1.71
IFT88-203ENST00000389373 Q5VV11 94 aa4.4□□□□□ -1.71
IFT88-203ENST00000389373 C14orf132Q9NPU4 83 aa4.4□□□□□ -1.71
IFT88-203ENST00000389373 A0A1B0GVX0 72 aa4.39□□□□□ -1.71
IFT88-203ENST00000389373 MDN1Q9NU22 5596 aa4.39□□□□□ -1.71
IFT88-203ENST00000389373 NDUFB1O75438 58 aa4.38□□□□□ -1.71
IFT88-203ENST00000389373 KRTAP10-5P60370 271 aa4.38□□□□□ -1.71
IFT88-203ENST00000389373 KMT2DO14686 5537 aa4.38□□□□□ -1.71
IFT88-203ENST00000389373 FAM236AA0A1B0GUQ0 79 aa4.37□□□□□ -1.71
IFT88-203ENST00000389373 FAM236BA0A1B0GV22 79 aa4.37□□□□□ -1.71
IFT88-203ENST00000389373 PCP4L1A6NKN8 68 aa4.37□□□□□ -1.71
IFT88-203ENST00000389373 SPRR2EP22531 72 aa4.36□□□□□ -1.71
IFT88-203ENST00000389373 SPRR2BP35325 72 aa4.36□□□□□ -1.71
IFT88-203ENST00000389373 SPRR2AP35326 72 aa4.36□□□□□ -1.71
IFT88-203ENST00000389373 NREPQ16612 68 aa4.36□□□□□ -1.71
IFT88-203ENST00000389373 GTF2H5Q6ZYL4 71 aa4.36□□□□□ -1.71
IFT88-203ENST00000389373 K7EP34 96 aa4.35□□□□□ -1.71
IFT88-203ENST00000389373 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
IFT88-203ENST00000389373 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
IFT88-203ENST00000389373 IMUPQ9GZP8 106 aa4.33□□□□□ -1.72
IFT88-203ENST00000389373 IGKV3D-7A0A0C4DH55 119 aa4.31□□□□□ -1.72
IFT88-203ENST00000389373 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
IFT88-203ENST00000389373 SPRR2FQ96RM1 72 aa4.31□□□□□ -1.72
IFT88-203ENST00000389373 F8W1H4 67 aa4.3□□□□□ -1.72
IFT88-203ENST00000389373 BPY2O14599 106 aa4.29□□□□□ -1.72
IFT88-203ENST00000389373 C5orf47Q569G3 176 aa4.29□□□□□ -1.72
IFT88-203ENST00000389373 PRR15Q8IV56 129 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms