RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 KRTAP10-1P60331 282 aa11.51□□□□□ -0.57
CSPG5-202ENST00000383738 K7ERS5 55 aa11.51□□□□□ -0.57
CSPG5-202ENST00000383738 IGLV7-46A0A075B6I9 117 aa11.5□□□□□ -0.57
CSPG5-202ENST00000383738 SPRR1AP35321 89 aa11.5□□□□□ -0.57
CSPG5-202ENST00000383738 Q75L30 129 aa11.49□□□□□ -0.57
CSPG5-202ENST00000383738 MMP24-AS1A0A0U1RRL7 71 aa11.48□□□□□ -0.57
CSPG5-202ENST00000383738 MIR22HGQ0VDD5 57 aa11.48□□□□□ -0.57
CSPG5-202ENST00000383738 ZCCHC13Q8WW36 166 aaKnown RBP11.48□□□□□ -0.57
CSPG5-202ENST00000383738 LINC00304Q8N9R0 145 aa11.47□□□□□ -0.57
CSPG5-202ENST00000383738 UQCR11O14957 56 aa11.46□□□□□ -0.57
CSPG5-202ENST00000383738 HRES1P13985 223 aa11.46□□□□□ -0.58
CSPG5-202ENST00000383738 SSBP3-AS1Q7Z2R9 100 aa11.43□□□□□ -0.58
CSPG5-202ENST00000383738 KRTAP11-1Q8IUC1 163 aa11.43□□□□□ -0.58
CSPG5-202ENST00000383738 J3QL48 77 aa11.42□□□□□ -0.58
CSPG5-202ENST00000383738 LINC00472Q9H8W2 130 aa11.41□□□□□ -0.58
CSPG5-202ENST00000383738 Q6ZR54 194 aa11.4□□□□□ -0.58
CSPG5-202ENST00000383738 ANK3Q12955 4377 aaKnown RBP11.4□□□□□ -0.58
CSPG5-202ENST00000383738 KRTAP4-16G5E9R7 235 aaPredicted RBP11.4□□□□□ -0.58
CSPG5-202ENST00000383738 PLAC8Q9NZF1 115 aa11.4□□□□□ -0.58
CSPG5-202ENST00000383738 COL7A1Q02388 2944 aa11.39□□□□□ -0.59
CSPG5-202ENST00000383738 LINC01558Q9Y6Z2 57 aa11.36□□□□□ -0.59
CSPG5-202ENST00000383738 Q8N1X5 172 aa11.36□□□□□ -0.59
CSPG5-202ENST00000383738 LCE6AA0A183 80 aa11.35□□□□□ -0.59
CSPG5-202ENST00000383738 KRTAP7-1Q8IUC3 87 aa11.34□□□□□ -0.59
CSPG5-202ENST00000383738 KRTAP29-1A8MX34 341 aaPredicted RBP11.33□□□□□ -0.6
CSPG5-202ENST00000383738 Q6ZRN7 208 aaPredicted RBP11.32□□□□□ -0.6
CSPG5-202ENST00000383738 H3BS24 57 aa11.3□□□□□ -0.6
CSPG5-202ENST00000383738 FBN3Q75N90 2809 aa11.3□□□□□ -0.6
CSPG5-202ENST00000383738 ADM2Q7Z4H4 148 aa11.3□□□□□ -0.6
CSPG5-202ENST00000383738 A0A087X002 238 aa11.28□□□□□ -0.6
CSPG5-202ENST00000383738 NOTCH2NLQ7Z3S9 236 aa11.28□□□□□ -0.6
CSPG5-202ENST00000383738 LINC01554Q52M75 96 aa11.27□□□□□ -0.61
CSPG5-202ENST00000383738 CRIPTQ9P021 101 aa11.26□□□□□ -0.61
CSPG5-202ENST00000383738 CSAG1Q6PB30 78 aa11.23□□□□□ -0.61
CSPG5-202ENST00000383738 A6NN06 94 aa11.15□□□□□ -0.62
CSPG5-202ENST00000383738 Q5W150 140 aa11.14□□□□□ -0.63
CSPG5-202ENST00000383738 SPINT4Q6UDR6 99 aa11.14□□□□□ -0.63
CSPG5-202ENST00000383738 Q5VSD8 79 aa11.11□□□□□ -0.63
CSPG5-202ENST00000383738 SPRR1BP22528 89 aa11.07□□□□□ -0.64
CSPG5-202ENST00000383738 A0A0D9SG42 100 aa11.05□□□□□ -0.64
CSPG5-202ENST00000383738 MEGF8Q7Z7M0 2845 aa11.03□□□□□ -0.64
CSPG5-202ENST00000383738 CSMD3Q7Z407 3707 aa11.01□□□□□ -0.65
CSPG5-202ENST00000383738 KRTAP21-3Q3LHN1 58 aa10.97□□□□□ -0.65
CSPG5-202ENST00000383738 COX6B2Q6YFQ2 88 aa10.92□□□□□ -0.66
CSPG5-202ENST00000383738 AKAP9Q99996 3911 aa10.91□□□□□ -0.66
CSPG5-202ENST00000383738 A0A1B0GU33 70 aa10.87□□□□□ -0.67
CSPG5-202ENST00000383738 DMAC1Q96GE9 116 aa10.86□□□□□ -0.67
CSPG5-202ENST00000383738 LINC00483Q53H64 154 aa10.84□□□□□ -0.67
CSPG5-202ENST00000383738 KRTAP13-2Q52LG2 175 aa10.83□□□□□ -0.68
CSPG5-202ENST00000383738 KRTAP13-1Q8IUC0 172 aa10.8□□□□□ -0.68
CSPG5-202ENST00000383738 SPATA8Q6RVD6 105 aa10.77□□□□□ -0.69
CSPG5-202ENST00000383738 Q6ZSA8 131 aa10.73□□□□□ -0.69
CSPG5-202ENST00000383738 DNHD1Q96M86 4753 aa10.62□□□□□ -0.71
CSPG5-202ENST00000383738 KRTAP1-4P0C5Y4 121 aa10.49□□□□□ -0.73
CSPG5-202ENST00000383738 H1FX-AS1Q4G0G2 97 aa10.45□□□□□ -0.74
CSPG5-202ENST00000383738 KRTAP25-1Q3LHN0 102 aa10.44□□□□□ -0.74
CSPG5-202ENST00000383738 M0R2T5 61 aa10.43□□□□□ -0.74
CSPG5-202ENST00000383738 ASB16-AS1Q495Z4 193 aa10.42□□□□□ -0.74
CSPG5-202ENST00000383738 HUWE1Q7Z6Z7 4374 aaKnown RBP10.39□□□□□ -0.75
CSPG5-202ENST00000383738 ROMO1P60602 79 aa10.36□□□□□ -0.75
CSPG5-202ENST00000383738 RPL37P61927 97 aaKnown RBP10.34□□□□□ -0.75
CSPG5-202ENST00000383738 A8MUU9 505 aa10.31□□□□□ -0.76
CSPG5-202ENST00000383738 NDUFAF8A1L188 74 aa10.28□□□□□ -0.76
CSPG5-202ENST00000383738 SEC61BP60468 96 aaKnown RBP10.28□□□□□ -0.76
CSPG5-202ENST00000383738 H0YAA0 97 aa10.25□□□□□ -0.77
CSPG5-202ENST00000383738 S4R3F8 94 aa10.22□□□□□ -0.77
CSPG5-202ENST00000383738 A0A1B0GVY2 172 aa10.22□□□□□ -0.77
CSPG5-202ENST00000383738 C10orf95Q9H7T3 257 aa10.21□□□□□ -0.77
CSPG5-202ENST00000383738 KRTAP13-3Q3SY46 172 aa10.15□□□□□ -0.79
CSPG5-202ENST00000383738 DNAH9Q9NYC9 4486 aa10.14□□□□□ -0.79
CSPG5-202ENST00000383738 RPS29P62273 56 aaKnown RBP10.12□□□□□ -0.79
CSPG5-202ENST00000383738 PLECQ15149 4684 aaKnown RBP10.07□□□□□ -0.8
CSPG5-202ENST00000383738 PRKDCP78527 4128 aaKnown RBP10.04□□□□□ -0.8
CSPG5-202ENST00000383738 KRTAP16-1A8MUX0 517 aa10.04□□□□□ -0.8
CSPG5-202ENST00000383738 R4GN34 69 aa10.01□□□□□ -0.81
CSPG5-202ENST00000383738 LUZP6Q538Z0 58 aa10□□□□□ -0.81
CSPG5-202ENST00000383738 XP32Q5T750 250 aa10□□□□□ -0.81
CSPG5-202ENST00000383738 CAMK2N1Q7Z7J9 78 aa9.96□□□□□ -0.81
CSPG5-202ENST00000383738 DNAH10Q8IVF4 4471 aa9.96□□□□□ -0.81
CSPG5-202ENST00000383738 C20orf166-AS1Q96NR2 134 aa9.94□□□□□ -0.82
CSPG5-202ENST00000383738 ANK2Q01484 3957 aa9.9□□□□□ -0.82
CSPG5-202ENST00000383738 DNAH11Q96DT5 4516 aa9.9□□□□□ -0.82
CSPG5-202ENST00000383738 M0QZ58 72 aa9.9□□□□□ -0.82
CSPG5-202ENST00000383738 KRTAP10-8P60410 259 aa9.89□□□□□ -0.83
CSPG5-202ENST00000383738 STARD9Q9P2P6 4700 aa9.87□□□□□ -0.83
CSPG5-202ENST00000383738 DNAH5Q8TE73 4624 aa9.79□□□□□ -0.84
CSPG5-202ENST00000383738 KRTAP4-5Q9BYR2 181 aa9.77□□□□□ -0.85
CSPG5-202ENST00000383738 FAT1Q14517 4588 aa9.76□□□□□ -0.85
CSPG5-202ENST00000383738 P0C880 135 aa9.74□□□□□ -0.85
CSPG5-202ENST00000383738 DNAH1Q9P2D7 4330 aa9.74□□□□□ -0.85
CSPG5-202ENST00000383738 LYSTQ99698 3801 aa9.72□□□□□ -0.85
CSPG5-202ENST00000383738 KMT2AQ03164 3969 aa9.68□□□□□ -0.86
CSPG5-202ENST00000383738 KRTAP3-1Q9BYR8 98 aa9.66□□□□□ -0.86
CSPG5-202ENST00000383738 TPRXLQ17RH7 258 aa9.66□□□□□ -0.86
CSPG5-202ENST00000383738 A0A0A0MQY5 61 aa9.64□□□□□ -0.87
CSPG5-202ENST00000383738 KIAA1109Q2LD37 5005 aa9.56□□□□□ -0.88
CSPG5-202ENST00000383738 KRTAP10-4P60372 401 aaPredicted RBP9.51□□□□□ -0.89
CSPG5-202ENST00000383738 MT1HL1P0DM35 61 aa9.51□□□□□ -0.89
CSPG5-202ENST00000383738 VPS13DQ5THJ4 4388 aa9.5□□□□□ -0.89
CSPG5-202ENST00000383738 KRTAP13-4Q3LI77 160 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms