RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 PANO1I0J062 215 aa8.91□□□□□ -0.98
CTNS-202ENST00000381870 ACYP2P14621 99 aa8.91□□□□□ -0.98
CTNS-202ENST00000381870 KRTAP13-3Q3SY46 172 aa8.9□□□□□ -0.99
CTNS-202ENST00000381870 RTL8CO15255 209 aa8.89□□□□□ -0.99
CTNS-202ENST00000381870 A0A1B0GU69 56 aa8.87□□□□□ -0.99
CTNS-202ENST00000381870 SPATA8Q6RVD6 105 aa8.86□□□□□ -0.99
CTNS-202ENST00000381870 ANAPC11Q9NYG5 84 aa8.86□□□□□ -0.99
CTNS-202ENST00000381870 DNAH3Q8TD57 4116 aa8.85□□□□□ -0.99
CTNS-202ENST00000381870 HUWE1Q7Z6Z7 4374 aaKnown RBP8.85□□□□□ -0.99
CTNS-202ENST00000381870 H3BS24 57 aa8.84□□□□□ -0.99
CTNS-202ENST00000381870 SPINK6Q6UWN8 80 aa8.84□□□□□ -0.99
CTNS-202ENST00000381870 LINC00483Q53H64 154 aa8.83□□□□□ -1
CTNS-202ENST00000381870 DMAC1Q96GE9 116 aa8.83□□□□□ -1
CTNS-202ENST00000381870 WWC2-AS2Q96NR7 200 aa8.82□□□□□ -1
CTNS-202ENST00000381870 MIR22HGQ0VDD5 57 aa8.8□□□□□ -1
CTNS-202ENST00000381870 C14orf177Q52M58 125 aa8.8□□□□□ -1
CTNS-202ENST00000381870 MEGF8Q7Z7M0 2845 aa8.8□□□□□ -1
CTNS-202ENST00000381870 FRAS1Q86XX4 4008 aa8.8□□□□□ -1
CTNS-202ENST00000381870 CSAG1Q6PB30 78 aa8.77□□□□□ -1.01
CTNS-202ENST00000381870 DNAH7Q8WXX0 4024 aa8.77□□□□□ -1.01
CTNS-202ENST00000381870 RETNLBQ9BQ08 111 aa8.77□□□□□ -1.01
CTNS-202ENST00000381870 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.76□□□□□ -1.01
CTNS-202ENST00000381870 UQCR11O14957 56 aa8.76□□□□□ -1.01
CTNS-202ENST00000381870 UBE2DNLQ8IWF7 75 aa8.75□□□□□ -1.01
CTNS-202ENST00000381870 DNAH8Q96JB1 4490 aa8.74□□□□□ -1.01
CTNS-202ENST00000381870 ZNF706Q9Y5V0 76 aaPredicted RBP8.72□□□□□ -1.01
CTNS-202ENST00000381870 SPACA4Q8TDM5 124 aa8.7□□□□□ -1.02
CTNS-202ENST00000381870 PSORS1C2Q9UIG4 136 aa8.69□□□□□ -1.02
CTNS-202ENST00000381870 TGP01266 2768 aa8.68□□□□□ -1.02
CTNS-202ENST00000381870 PRKDCP78527 4128 aaKnown RBP8.68□□□□□ -1.02
CTNS-202ENST00000381870 KRTAP21-3Q3LHN1 58 aa8.66□□□□□ -1.02
CTNS-202ENST00000381870 STAB2Q8WWQ8 2551 aa8.66□□□□□ -1.02
CTNS-202ENST00000381870 IGKV2-30P06310 120 aa8.65□□□□□ -1.02
CTNS-202ENST00000381870 CIRBP-AS1Q8TBR5 109 aa8.65□□□□□ -1.02
CTNS-202ENST00000381870 IGLV5-52A0A0A0MRZ9 124 aa8.63□□□□□ -1.03
CTNS-202ENST00000381870 FAM229AH3BQW9 127 aa8.63□□□□□ -1.03
CTNS-202ENST00000381870 ZNF861PO60384 105 aa8.63□□□□□ -1.03
CTNS-202ENST00000381870 APLNQ9ULZ1 77 aa8.63□□□□□ -1.03
CTNS-202ENST00000381870 FBN3Q75N90 2809 aa8.62□□□□□ -1.03
CTNS-202ENST00000381870 Q6ZRN7 208 aaPredicted RBP8.6□□□□□ -1.03
CTNS-202ENST00000381870 HECTD4Q9Y4D8 3996 aa8.57□□□□□ -1.04
CTNS-202ENST00000381870 NBDYA0A0U1RRE5 68 aa8.57□□□□□ -1.04
CTNS-202ENST00000381870 PLECQ15149 4684 aaKnown RBP8.57□□□□□ -1.04
CTNS-202ENST00000381870 IGLV7-43P04211 117 aa8.56□□□□□ -1.04
CTNS-202ENST00000381870 IGKV2D-30A0A075B6S6 120 aa8.55□□□□□ -1.04
CTNS-202ENST00000381870 DNAH17Q9UFH2 4485 aa8.53□□□□□ -1.04
CTNS-202ENST00000381870 DYNC2H1Q8NCM8 4307 aaKnown RBP8.53□□□□□ -1.04
CTNS-202ENST00000381870 SPINK1P00995 79 aa8.51□□□□□ -1.05
CTNS-202ENST00000381870 C1orf134Q5TEV5 83 aa8.51□□□□□ -1.05
CTNS-202ENST00000381870 VPS13DQ5THJ4 4388 aa8.49□□□□□ -1.05
CTNS-202ENST00000381870 KRTAP16-1A8MUX0 517 aa8.48□□□□□ -1.05
CTNS-202ENST00000381870 A0A087WTM6 91 aa8.47□□□□□ -1.05
CTNS-202ENST00000381870 SSBP3-AS1Q7Z2R9 100 aa8.44□□□□□ -1.06
CTNS-202ENST00000381870 A8MUU9 505 aa8.43□□□□□ -1.06
CTNS-202ENST00000381870 KRTAP25-1Q3LHN0 102 aa8.43□□□□□ -1.06
CTNS-202ENST00000381870 H0YAA0 97 aa8.42□□□□□ -1.06
CTNS-202ENST00000381870 Q8N1X5 172 aa8.42□□□□□ -1.06
CTNS-202ENST00000381870 Q6ZSA8 131 aa8.41□□□□□ -1.06
CTNS-202ENST00000381870 LINC00304Q8N9R0 145 aa8.4□□□□□ -1.07
CTNS-202ENST00000381870 ROMO1P60602 79 aa8.39□□□□□ -1.07
CTNS-202ENST00000381870 STARD9Q9P2P6 4700 aa8.39□□□□□ -1.07
CTNS-202ENST00000381870 DNAH2Q9P225 4427 aa8.37□□□□□ -1.07
CTNS-202ENST00000381870 LY6G6CO95867 125 aa8.37□□□□□ -1.07
CTNS-202ENST00000381870 KRTAP13-2Q52LG2 175 aa8.36□□□□□ -1.07
CTNS-202ENST00000381870 KMT2AQ03164 3969 aa8.34□□□□□ -1.07
CTNS-202ENST00000381870 TYMSOSQ8TAI1 123 aa8.34□□□□□ -1.08
CTNS-202ENST00000381870 CRIPTQ9P021 101 aa8.3□□□□□ -1.08
CTNS-202ENST00000381870 DNAH11Q96DT5 4516 aa8.3□□□□□ -1.08
CTNS-202ENST00000381870 FLG2Q5D862 2391 aaPredicted RBP8.29□□□□□ -1.08
CTNS-202ENST00000381870 DNAH6Q9C0G6 4158 aa8.28□□□□□ -1.08
CTNS-202ENST00000381870 A0A1B0GU33 70 aa8.26□□□□□ -1.09
CTNS-202ENST00000381870 NUPR2A6NF83 97 aa8.26□□□□□ -1.09
CTNS-202ENST00000381870 H1FX-AS1Q4G0G2 97 aa8.21□□□□□ -1.1
CTNS-202ENST00000381870 P0C880 135 aa8.2□□□□□ -1.1
CTNS-202ENST00000381870 DNAH5Q8TE73 4624 aa8.17□□□□□ -1.1
CTNS-202ENST00000381870 HYDINQ4G0P3 5121 aa8.15□□□□□ -1.1
CTNS-202ENST00000381870 LRP1BQ9NZR2 4599 aa8.15□□□□□ -1.11
CTNS-202ENST00000381870 KRTAP3-1Q9BYR8 98 aa8.14□□□□□ -1.11
CTNS-202ENST00000381870 KRTAP1-4P0C5Y4 121 aa8.13□□□□□ -1.11
CTNS-202ENST00000381870 KMT2CQ8NEZ4 4911 aaKnown RBP8.08□□□□□ -1.12
CTNS-202ENST00000381870 KRTAP10-2P60368 255 aa8.08□□□□□ -1.12
CTNS-202ENST00000381870 K7ERS5 55 aa8.07□□□□□ -1.12
CTNS-202ENST00000381870 COX6B2Q6YFQ2 88 aa8.05□□□□□ -1.12
CTNS-202ENST00000381870 VPS13BQ7Z7G8 4022 aa8.05□□□□□ -1.12
CTNS-202ENST00000381870 C9orf92A6NGG3 77 aa7.98□□□□□ -1.13
CTNS-202ENST00000381870 SACSQ9NZJ4 4579 aa7.98□□□□□ -1.13
CTNS-202ENST00000381870 KRTAP10-1P60331 282 aa7.97□□□□□ -1.13
CTNS-202ENST00000381870 SPINT4Q6UDR6 99 aa7.96□□□□□ -1.13
CTNS-202ENST00000381870 TPRXLQ17RH7 258 aa7.96□□□□□ -1.14
CTNS-202ENST00000381870 FAT2Q9NYQ8 4349 aa7.93□□□□□ -1.14
CTNS-202ENST00000381870 PKD1P98161 4303 aa7.92□□□□□ -1.14
CTNS-202ENST00000381870 C20orf166-AS1Q96NR2 134 aa7.91□□□□□ -1.14
CTNS-202ENST00000381870 RPL37P61927 97 aaKnown RBP7.89□□□□□ -1.15
CTNS-202ENST00000381870 RYR3Q15413 4870 aa7.89□□□□□ -1.15
CTNS-202ENST00000381870 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
CTNS-202ENST00000381870 A0A0D9SG42 100 aa7.88□□□□□ -1.15
CTNS-202ENST00000381870 KRTAP13-4Q3LI77 160 aa7.88□□□□□ -1.15
CTNS-202ENST00000381870 NDUFAF8A1L188 74 aa7.85□□□□□ -1.15
CTNS-202ENST00000381870 RYR2Q92736 4967 aa7.85□□□□□ -1.15
CTNS-202ENST00000381870 PKHD1P08F94 4074 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms