RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 FAT2Q9NYQ8 4349 aa10.44□□□□□ -0.74
PDX1-201ENST00000381033 K7EQZ3 153 aa10.44□□□□□ -0.74
PDX1-201ENST00000381033 RETNLBQ9BQ08 111 aa10.44□□□□□ -0.74
PDX1-201ENST00000381033 IGHV6-1A0A0B4J1U7 121 aa10.44□□□□□ -0.74
PDX1-201ENST00000381033 PLA2G1BP04054 148 aaKnown RBP10.44□□□□□ -0.74
PDX1-201ENST00000381033 SPRR1BP22528 89 aa10.44□□□□□ -0.74
PDX1-201ENST00000381033 PKD1P98161 4303 aa10.44□□□□□ -0.74
PDX1-201ENST00000381033 LCE6AA0A183 80 aa10.43□□□□□ -0.74
PDX1-201ENST00000381033 PRR4Q16378 134 aa10.43□□□□□ -0.74
PDX1-201ENST00000381033 ADM2Q7Z4H4 148 aa10.43□□□□□ -0.74
PDX1-201ENST00000381033 ZCCHC13Q8WW36 166 aaKnown RBP10.43□□□□□ -0.74
PDX1-201ENST00000381033 FAM30AQ9NZY2 134 aa10.43□□□□□ -0.74
PDX1-201ENST00000381033 IGLV9-49A0A0B4J1Y8 123 aa10.42□□□□□ -0.74
PDX1-201ENST00000381033 ALMS1Q8TCU4 4167 aa10.42□□□□□ -0.74
PDX1-201ENST00000381033 PLAC8Q9NZF1 115 aa10.41□□□□□ -0.74
PDX1-201ENST00000381033 A0A1B0GW54 56 aa10.41□□□□□ -0.74
PDX1-201ENST00000381033 RPL37AP61513 92 aaKnown RBP10.41□□□□□ -0.74
PDX1-201ENST00000381033 CASC2Q6XLA1 102 aa10.41□□□□□ -0.74
PDX1-201ENST00000381033 WWC2-AS2Q96NR7 200 aa10.4□□□□□ -0.74
PDX1-201ENST00000381033 LRP1BQ9NZR2 4599 aa10.39□□□□□ -0.75
PDX1-201ENST00000381033 ASB16-AS1Q495Z4 193 aa10.34□□□□□ -0.75
PDX1-201ENST00000381033 CIRBP-AS1Q8TBR5 109 aa10.33□□□□□ -0.76
PDX1-201ENST00000381033 PKHD1P08F94 4074 aa10.33□□□□□ -0.76
PDX1-201ENST00000381033 LINC00208Q96KT6 92 aa10.33□□□□□ -0.76
PDX1-201ENST00000381033 ZNF861PO60384 105 aa10.32□□□□□ -0.76
PDX1-201ENST00000381033 NDUFB1O75438 58 aa10.3□□□□□ -0.76
PDX1-201ENST00000381033 SACSQ9NZJ4 4579 aa10.3□□□□□ -0.76
PDX1-201ENST00000381033 KRTAP21-3Q3LHN1 58 aa10.29□□□□□ -0.76
PDX1-201ENST00000381033 WFDC13Q8IUB5 93 aa10.29□□□□□ -0.76
PDX1-201ENST00000381033 KRTAP10-1P60331 282 aa10.28□□□□□ -0.76
PDX1-201ENST00000381033 LINC00483Q53H64 154 aa10.28□□□□□ -0.76
PDX1-201ENST00000381033 LINC00472Q9H8W2 130 aa10.27□□□□□ -0.77
PDX1-201ENST00000381033 VPS13BQ7Z7G8 4022 aa10.25□□□□□ -0.77
PDX1-201ENST00000381033 IGLV7-43P04211 117 aa10.25□□□□□ -0.77
PDX1-201ENST00000381033 A0A087X002 238 aa10.24□□□□□ -0.77
PDX1-201ENST00000381033 SPINK7P58062 85 aa10.21□□□□□ -0.78
PDX1-201ENST00000381033 Q96NJ1 140 aa10.2□□□□□ -0.78
PDX1-201ENST00000381033 A8MWP4 228 aa10.16□□□□□ -0.78
PDX1-201ENST00000381033 LINC01558Q9Y6Z2 57 aa10.16□□□□□ -0.78
PDX1-201ENST00000381033 Q6ZSA8 131 aa10.16□□□□□ -0.78
PDX1-201ENST00000381033 SPANXA2-OT1Q8N9U9 137 aa10.16□□□□□ -0.78
PDX1-201ENST00000381033 KRTAP29-1A8MX34 341 aaPredicted RBP10.14□□□□□ -0.79
PDX1-201ENST00000381033 CSAG1Q6PB30 78 aa10.13□□□□□ -0.79
PDX1-201ENST00000381033 ROMO1P60602 79 aa10.11□□□□□ -0.79
PDX1-201ENST00000381033 KMT2CQ8NEZ4 4911 aaKnown RBP10.1□□□□□ -0.79
PDX1-201ENST00000381033 MMP24-AS1A0A0U1RRL7 71 aa10.08□□□□□ -0.8
PDX1-201ENST00000381033 SPINK6Q6UWN8 80 aa10.07□□□□□ -0.8
PDX1-201ENST00000381033 NOTCH2NLQ7Z3S9 236 aa10.07□□□□□ -0.8
PDX1-201ENST00000381033 COA5Q86WW8 74 aa10.06□□□□□ -0.8
PDX1-201ENST00000381033 DYNC1H1Q14204 4646 aaKnown RBP10.06□□□□□ -0.8
PDX1-201ENST00000381033 KRTAP13-2Q52LG2 175 aa10.04□□□□□ -0.8
PDX1-201ENST00000381033 FAT1Q14517 4588 aa10.03□□□□□ -0.8
PDX1-201ENST00000381033 SPAG11AQ6PDA7 123 aa10.02□□□□□ -0.81
PDX1-201ENST00000381033 C8orf17Q9NRJ1 99 aa9.99□□□□□ -0.81
PDX1-201ENST00000381033 A0A1B0GVX0 72 aa9.98□□□□□ -0.81
PDX1-201ENST00000381033 KRTAP1-4P0C5Y4 121 aa9.98□□□□□ -0.81
PDX1-201ENST00000381033 RYR2Q92736 4967 aa9.97□□□□□ -0.81
PDX1-201ENST00000381033 SMR3BP02814 79 aaPredicted RBP9.97□□□□□ -0.81
PDX1-201ENST00000381033 H0Y9P7 68 aa9.96□□□□□ -0.82
PDX1-201ENST00000381033 SSBP3-AS1Q7Z2R9 100 aa9.95□□□□□ -0.82
PDX1-201ENST00000381033 CDK2AP2O75956 126 aa9.94□□□□□ -0.82
PDX1-201ENST00000381033 APOBP04114 4563 aaKnown RBP9.92□□□□□ -0.82
PDX1-201ENST00000381033 MIR22HGQ0VDD5 57 aa9.91□□□□□ -0.82
PDX1-201ENST00000381033 H3BPC8 53 aa9.87□□□□□ -0.83
PDX1-201ENST00000381033 A0A1B0GVY2 172 aa9.86□□□□□ -0.83
PDX1-201ENST00000381033 KRTAP16-1A8MUX0 517 aa9.86□□□□□ -0.83
PDX1-201ENST00000381033 P0C880 135 aa9.86□□□□□ -0.83
PDX1-201ENST00000381033 MRPL34Q9BQ48 92 aaKnown RBP9.86□□□□□ -0.83
PDX1-201ENST00000381033 IGLV7-46A0A075B6I9 117 aa9.82□□□□□ -0.84
PDX1-201ENST00000381033 PCOTHQ58A44 107 aa9.81□□□□□ -0.84
PDX1-201ENST00000381033 Q5W150 140 aa9.8□□□□□ -0.84
PDX1-201ENST00000381033 TYMSOSQ8TAI1 123 aa9.8□□□□□ -0.84
PDX1-201ENST00000381033 RYR3Q15413 4870 aa9.79□□□□□ -0.84
PDX1-201ENST00000381033 TP53AIP1Q9HCN2 124 aa9.77□□□□□ -0.85
PDX1-201ENST00000381033 SPATA8Q6RVD6 105 aa9.74□□□□□ -0.85
PDX1-201ENST00000381033 KRTAP10-4P60372 401 aaPredicted RBP9.72□□□□□ -0.85
PDX1-201ENST00000381033 KRTAP25-1Q3LHN0 102 aa9.69□□□□□ -0.86
PDX1-201ENST00000381033 LRP1Q07954 4544 aaKnown RBP9.67□□□□□ -0.86
PDX1-201ENST00000381033 KRTAP13-3Q3SY46 172 aa9.67□□□□□ -0.86
PDX1-201ENST00000381033 PKHD1L1Q86WI1 4243 aa9.66□□□□□ -0.86
PDX1-201ENST00000381033 SPINK1P00995 79 aa9.64□□□□□ -0.87
PDX1-201ENST00000381033 LINC00304Q8N9R0 145 aa9.64□□□□□ -0.87
PDX1-201ENST00000381033 HRES1P13985 223 aa9.61□□□□□ -0.87
PDX1-201ENST00000381033 SEC61BP60468 96 aaKnown RBP9.61□□□□□ -0.87
PDX1-201ENST00000381033 HSPG2P98160 4391 aa9.61□□□□□ -0.87
PDX1-201ENST00000381033 C20orf166-AS1Q96NR2 134 aa9.54□□□□□ -0.88
PDX1-201ENST00000381033 NDUFAF8A1L188 74 aa9.52□□□□□ -0.88
PDX1-201ENST00000381033 KRTAP17-1Q9BYP8 105 aa9.52□□□□□ -0.88
PDX1-201ENST00000381033 FLG2Q5D862 2391 aaPredicted RBP9.52□□□□□ -0.88
PDX1-201ENST00000381033 KIAA1109Q2LD37 5005 aa9.51□□□□□ -0.89
PDX1-201ENST00000381033 FAM229AH3BQW9 127 aa9.51□□□□□ -0.89
PDX1-201ENST00000381033 C9orf92A6NGG3 77 aa9.5□□□□□ -0.89
PDX1-201ENST00000381033 A8MUU9 505 aa9.5□□□□□ -0.89
PDX1-201ENST00000381033 LUZP6Q538Z0 58 aa9.49□□□□□ -0.89
PDX1-201ENST00000381033 UQCR11O14957 56 aa9.48□□□□□ -0.89
PDX1-201ENST00000381033 TNXBP22105 4242 aa9.48□□□□□ -0.89
PDX1-201ENST00000381033 RYR1P21817 5038 aa9.47□□□□□ -0.89
PDX1-201ENST00000381033 MYCBP2O75592 4640 aa9.47□□□□□ -0.89
PDX1-201ENST00000381033 IGKV2D-30A0A075B6S6 120 aa9.46□□□□□ -0.89
PDX1-201ENST00000381033 J3QL48 77 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms