RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 CD164Q04900 197 aa11.57□□□□□ -0.56
FOXC1-201ENST00000380874 Q1T7F1 81 aa11.56□□□□□ -0.56
FOXC1-201ENST00000380874 SSBP3-AS1Q7Z2R9 100 aa11.56□□□□□ -0.56
FOXC1-201ENST00000380874 LINC00313P59037 77 aa11.55□□□□□ -0.56
FOXC1-201ENST00000380874 SMR3BP02814 79 aaPredicted RBP11.54□□□□□ -0.56
FOXC1-201ENST00000380874 DNAH3Q8TD57 4116 aa11.54□□□□□ -0.56
FOXC1-201ENST00000380874 FBN3Q75N90 2809 aa11.53□□□□□ -0.56
FOXC1-201ENST00000380874 PLECQ15149 4684 aaKnown RBP11.52□□□□□ -0.56
FOXC1-201ENST00000380874 MEGF8Q7Z7M0 2845 aa11.52□□□□□ -0.57
FOXC1-201ENST00000380874 IGLV7-46A0A075B6I9 117 aa11.51□□□□□ -0.57
FOXC1-201ENST00000380874 IGKV2D-30A0A075B6S6 120 aa11.48□□□□□ -0.57
FOXC1-201ENST00000380874 IGKV2-30P06310 120 aa11.48□□□□□ -0.57
FOXC1-201ENST00000380874 KRTAP10-1P60331 282 aa11.48□□□□□ -0.57
FOXC1-201ENST00000380874 LOC101927531A0A1B0GV80 90 aa11.48□□□□□ -0.57
FOXC1-201ENST00000380874 PLA2G1BP04054 148 aaKnown RBP11.48□□□□□ -0.57
FOXC1-201ENST00000380874 Q8N9P0 234 aaPredicted RBP11.46□□□□□ -0.58
FOXC1-201ENST00000380874 TYMSOSQ8TAI1 123 aa11.44□□□□□ -0.58
FOXC1-201ENST00000380874 C8orf87E5RJ46 101 aa11.43□□□□□ -0.58
FOXC1-201ENST00000380874 Q5W150 140 aa11.42□□□□□ -0.58
FOXC1-201ENST00000380874 PRR26Q8N8Z3 221 aa11.41□□□□□ -0.58
FOXC1-201ENST00000380874 DNAH1Q9P2D7 4330 aa11.39□□□□□ -0.59
FOXC1-201ENST00000380874 FAM229AH3BQW9 127 aa11.37□□□□□ -0.59
FOXC1-201ENST00000380874 Q5VV11 94 aa11.37□□□□□ -0.59
FOXC1-201ENST00000380874 KTN1-AS1Q86SY8 53 aa11.37□□□□□ -0.59
FOXC1-201ENST00000380874 ATP11AUNQ6ZP68 121 aa11.37□□□□□ -0.59
FOXC1-201ENST00000380874 HRES1P13985 223 aa11.36□□□□□ -0.59
FOXC1-201ENST00000380874 ACYP2P14621 99 aa11.36□□□□□ -0.59
FOXC1-201ENST00000380874 DNAH7Q8WXX0 4024 aa11.32□□□□□ -0.6
FOXC1-201ENST00000380874 KRTAP13-2Q52LG2 175 aa11.31□□□□□ -0.6
FOXC1-201ENST00000380874 STARD9Q9P2P6 4700 aa11.31□□□□□ -0.6
FOXC1-201ENST00000380874 SPINK1P00995 79 aa11.3□□□□□ -0.6
FOXC1-201ENST00000380874 A8MU10 97 aa11.3□□□□□ -0.6
FOXC1-201ENST00000380874 ASB16-AS1Q495Z4 193 aa11.29□□□□□ -0.6
FOXC1-201ENST00000380874 C7orf65Q6ZTY9 151 aa11.25□□□□□ -0.61
FOXC1-201ENST00000380874 PRKDCP78527 4128 aaKnown RBP11.24□□□□□ -0.61
FOXC1-201ENST00000380874 LINC00304Q8N9R0 145 aa11.21□□□□□ -0.62
FOXC1-201ENST00000380874 RBM12B-AS1Q9P1G2 102 aa11.2□□□□□ -0.62
FOXC1-201ENST00000380874 KRTAP21-3Q3LHN1 58 aa11.19□□□□□ -0.62
FOXC1-201ENST00000380874 CDC42SE1Q9NRR8 79 aa11.19□□□□□ -0.62
FOXC1-201ENST00000380874 C9orf92A6NGG3 77 aa11.18□□□□□ -0.62
FOXC1-201ENST00000380874 A0A1B0GU69 56 aa11.17□□□□□ -0.62
FOXC1-201ENST00000380874 Q75L30 129 aa11.17□□□□□ -0.62
FOXC1-201ENST00000380874 LINC01558Q9Y6Z2 57 aa11.16□□□□□ -0.62
FOXC1-201ENST00000380874 KMT2AQ03164 3969 aa11.16□□□□□ -0.62
FOXC1-201ENST00000380874 VPS13DQ5THJ4 4388 aa11.15□□□□□ -0.62
FOXC1-201ENST00000380874 SPINK7P58062 85 aa11.13□□□□□ -0.63
FOXC1-201ENST00000380874 Q8N1X5 172 aa11.12□□□□□ -0.63
FOXC1-201ENST00000380874 Q6ZSA8 131 aa11.11□□□□□ -0.63
FOXC1-201ENST00000380874 LCA10Q71F78 164 aa11.09□□□□□ -0.63
FOXC1-201ENST00000380874 KRTAP1-4P0C5Y4 121 aa11.08□□□□□ -0.64
FOXC1-201ENST00000380874 DNHD1Q96M86 4753 aa11.08□□□□□ -0.64
FOXC1-201ENST00000380874 DMAC1Q96GE9 116 aa11.03□□□□□ -0.64
FOXC1-201ENST00000380874 DNAH11Q96DT5 4516 aa11.03□□□□□ -0.64
FOXC1-201ENST00000380874 DNAH8Q96JB1 4490 aa11.02□□□□□ -0.64
FOXC1-201ENST00000380874 FRAS1Q86XX4 4008 aa11.01□□□□□ -0.65
FOXC1-201ENST00000380874 DNAH17Q9UFH2 4485 aa10.99□□□□□ -0.65
FOXC1-201ENST00000380874 DYNC2H1Q8NCM8 4307 aaKnown RBP10.98□□□□□ -0.65
FOXC1-201ENST00000380874 KRTAP13-3Q3SY46 172 aa10.98□□□□□ -0.65
FOXC1-201ENST00000380874 DNAH2Q9P225 4427 aa10.96□□□□□ -0.66
FOXC1-201ENST00000380874 KRTAP16-1A8MUX0 517 aa10.9□□□□□ -0.66
FOXC1-201ENST00000380874 HECTD4Q9Y4D8 3996 aa10.89□□□□□ -0.67
FOXC1-201ENST00000380874 J3QL48 77 aa10.88□□□□□ -0.67
FOXC1-201ENST00000380874 UQCR11O14957 56 aa10.88□□□□□ -0.67
FOXC1-201ENST00000380874 PRAC1Q96KF2 57 aa10.86□□□□□ -0.67
FOXC1-201ENST00000380874 MIR22HGQ0VDD5 57 aa10.86□□□□□ -0.67
FOXC1-201ENST00000380874 DNAH6Q9C0G6 4158 aa10.83□□□□□ -0.68
FOXC1-201ENST00000380874 A6NN06 94 aa10.82□□□□□ -0.68
FOXC1-201ENST00000380874 LRP1BQ9NZR2 4599 aa10.82□□□□□ -0.68
FOXC1-201ENST00000380874 K7ERS5 55 aa10.77□□□□□ -0.69
FOXC1-201ENST00000380874 LINC01554Q52M75 96 aa10.74□□□□□ -0.69
FOXC1-201ENST00000380874 DNAH5Q8TE73 4624 aa10.72□□□□□ -0.69
FOXC1-201ENST00000380874 Q5VSD8 79 aa10.67□□□□□ -0.7
FOXC1-201ENST00000380874 RPS29P62273 56 aaKnown RBP10.64□□□□□ -0.71
FOXC1-201ENST00000380874 HYDINQ4G0P3 5121 aa10.62□□□□□ -0.71
FOXC1-201ENST00000380874 H3BS24 57 aa10.57□□□□□ -0.72
FOXC1-201ENST00000380874 SPATA8Q6RVD6 105 aa10.56□□□□□ -0.72
FOXC1-201ENST00000380874 VPS13BQ7Z7G8 4022 aa10.56□□□□□ -0.72
FOXC1-201ENST00000380874 ALMS1Q8TCU4 4167 aa10.56□□□□□ -0.72
FOXC1-201ENST00000380874 A8MUU9 505 aa10.55□□□□□ -0.72
FOXC1-201ENST00000380874 C20orf166-AS1Q96NR2 134 aa10.53□□□□□ -0.72
FOXC1-201ENST00000380874 FAT1Q14517 4588 aa10.52□□□□□ -0.72
FOXC1-201ENST00000380874 CSAG1Q6PB30 78 aa10.52□□□□□ -0.73
FOXC1-201ENST00000380874 ADM2Q7Z4H4 148 aa10.52□□□□□ -0.73
FOXC1-201ENST00000380874 A0A1B0GVY2 172 aa10.51□□□□□ -0.73
FOXC1-201ENST00000380874 A0A1B0GU33 70 aa10.5□□□□□ -0.73
FOXC1-201ENST00000380874 DYNC1H1Q14204 4646 aaKnown RBP10.43□□□□□ -0.74
FOXC1-201ENST00000380874 COX6B2Q6YFQ2 88 aa10.42□□□□□ -0.74
FOXC1-201ENST00000380874 PKHD1P08F94 4074 aa10.39□□□□□ -0.75
FOXC1-201ENST00000380874 FAT2Q9NYQ8 4349 aa10.37□□□□□ -0.75
FOXC1-201ENST00000380874 A0A0D9SG42 100 aa10.35□□□□□ -0.75
FOXC1-201ENST00000380874 KRTAP10-4P60372 401 aaPredicted RBP10.33□□□□□ -0.76
FOXC1-201ENST00000380874 PKD1P98161 4303 aa10.32□□□□□ -0.76
FOXC1-201ENST00000380874 H1FX-AS1Q4G0G2 97 aa10.32□□□□□ -0.76
FOXC1-201ENST00000380874 KRTAP3-1Q9BYR8 98 aa10.32□□□□□ -0.76
FOXC1-201ENST00000380874 SACSQ9NZJ4 4579 aa10.27□□□□□ -0.77
FOXC1-201ENST00000380874 H0YAA0 97 aa10.24□□□□□ -0.77
FOXC1-201ENST00000380874 SPINT4Q6UDR6 99 aa10.24□□□□□ -0.77
FOXC1-201ENST00000380874 CRIPTQ9P021 101 aa10.21□□□□□ -0.77
FOXC1-201ENST00000380874 RPL37P61927 97 aaKnown RBP10.21□□□□□ -0.78
FOXC1-201ENST00000380874 S4R3F8 94 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms