RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 CSMD3Q7Z407 3707 aa4.51□□□□□ -1.69
CDKL5-201ENST00000379989 KRTAP7-1Q8IUC3 87 aa4.51□□□□□ -1.69
CDKL5-201ENST00000379989 SETD2Q9BYW2 2564 aaPredicted RBP4.5□□□□□ -1.69
CDKL5-201ENST00000379989 HUWE1Q7Z6Z7 4374 aaKnown RBP4.5□□□□□ -1.69
CDKL5-201ENST00000379989 LCE2CQ5TA81 110 aa4.5□□□□□ -1.69
CDKL5-201ENST00000379989 PKD1L1Q8TDX9 2849 aa4.5□□□□□ -1.69
CDKL5-201ENST00000379989 ACYP2P14621 99 aa4.49□□□□□ -1.69
CDKL5-201ENST00000379989 NBDYA0A0U1RRE5 68 aa4.48□□□□□ -1.69
CDKL5-201ENST00000379989 IGLV5-52A0A0A0MRZ9 124 aa4.47□□□□□ -1.69
CDKL5-201ENST00000379989 C8orf17Q9NRJ1 99 aa4.46□□□□□ -1.7
CDKL5-201ENST00000379989 DMAC1Q96GE9 116 aa4.46□□□□□ -1.7
CDKL5-201ENST00000379989 MEGF8Q7Z7M0 2845 aa4.46□□□□□ -1.7
CDKL5-201ENST00000379989 A8MUU9 505 aa4.45□□□□□ -1.7
CDKL5-201ENST00000379989 PRLHP81277 87 aa4.45□□□□□ -1.7
CDKL5-201ENST00000379989 COL7A1Q02388 2944 aa4.44□□□□□ -1.7
CDKL5-201ENST00000379989 DNAH6Q9C0G6 4158 aa4.44□□□□□ -1.7
CDKL5-201ENST00000379989 LINC00483Q53H64 154 aa4.44□□□□□ -1.7
CDKL5-201ENST00000379989 Q96NJ1 140 aa4.44□□□□□ -1.7
CDKL5-201ENST00000379989 SRRM2Q9UQ35 2752 aaKnown RBP4.44□□□□□ -1.7
CDKL5-201ENST00000379989 SPRR1BP22528 89 aa4.44□□□□□ -1.7
CDKL5-201ENST00000379989 Q6ZRN7 208 aaPredicted RBP4.42□□□□□ -1.7
CDKL5-201ENST00000379989 LCE2AQ5TA79 106 aaPredicted RBP4.42□□□□□ -1.7
CDKL5-201ENST00000379989 MRPL34Q9BQ48 92 aaKnown RBP4.42□□□□□ -1.7
CDKL5-201ENST00000379989 Q5W150 140 aa4.41□□□□□ -1.7
CDKL5-201ENST00000379989 NOTCH2NLQ7Z3S9 236 aa4.41□□□□□ -1.7
CDKL5-201ENST00000379989 KRTAP13-3Q3SY46 172 aa4.41□□□□□ -1.7
CDKL5-201ENST00000379989 LINC00304Q8N9R0 145 aa4.4□□□□□ -1.71
CDKL5-201ENST00000379989 A0A096LNI7 61 aa4.4□□□□□ -1.71
CDKL5-201ENST00000379989 FRAS1Q86XX4 4008 aa4.39□□□□□ -1.71
CDKL5-201ENST00000379989 IGLV7-43P04211 117 aa4.39□□□□□ -1.71
CDKL5-201ENST00000379989 KRTAP1-5Q9BYS1 174 aa4.39□□□□□ -1.71
CDKL5-201ENST00000379989 A0A1B0GVX0 72 aa4.38□□□□□ -1.71
CDKL5-201ENST00000379989 CASC10Q5T4H9 136 aa4.38□□□□□ -1.71
CDKL5-201ENST00000379989 STARD9Q9P2P6 4700 aa4.38□□□□□ -1.71
CDKL5-201ENST00000379989 DNAH10Q8IVF4 4471 aa4.37□□□□□ -1.71
CDKL5-201ENST00000379989 FLG2Q5D862 2391 aaPredicted RBP4.37□□□□□ -1.71
CDKL5-201ENST00000379989 A0A087WTM6 91 aa4.37□□□□□ -1.71
CDKL5-201ENST00000379989 SPACA4Q8TDM5 124 aa4.37□□□□□ -1.71
CDKL5-201ENST00000379989 FBN3Q75N90 2809 aa4.36□□□□□ -1.71
CDKL5-201ENST00000379989 WWC2-AS2Q96NR7 200 aa4.36□□□□□ -1.71
CDKL5-201ENST00000379989 CRIPTQ9P021 101 aa4.36□□□□□ -1.71
CDKL5-201ENST00000379989 STAB1Q9NY15 2570 aa4.35□□□□□ -1.71
CDKL5-201ENST00000379989 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
CDKL5-201ENST00000379989 KRTAP16-1A8MUX0 517 aa4.35□□□□□ -1.71
CDKL5-201ENST00000379989 KRTAP13-1Q8IUC0 172 aa4.34□□□□□ -1.71
CDKL5-201ENST00000379989 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.72
CDKL5-201ENST00000379989 H0YAA0 97 aa4.32□□□□□ -1.72
CDKL5-201ENST00000379989 COL6A5A8TX70 2615 aa4.32□□□□□ -1.72
CDKL5-201ENST00000379989 PLECQ15149 4684 aaKnown RBP4.31□□□□□ -1.72
CDKL5-201ENST00000379989 LORP23490 312 aaPredicted RBP4.31□□□□□ -1.72
CDKL5-201ENST00000379989 KRTAP11-1Q8IUC1 163 aa4.31□□□□□ -1.72
CDKL5-201ENST00000379989 TENM3Q9P273 2699 aa4.31□□□□□ -1.72
CDKL5-201ENST00000379989 VPS13DQ5THJ4 4388 aa4.31□□□□□ -1.72
CDKL5-201ENST00000379989 CDK2AP2O75956 126 aa4.3□□□□□ -1.72
CDKL5-201ENST00000379989 HYDINQ4G0P3 5121 aa4.29□□□□□ -1.72
CDKL5-201ENST00000379989 SPINT4Q6UDR6 99 aa4.28□□□□□ -1.72
CDKL5-201ENST00000379989 Q6ZSA8 131 aa4.28□□□□□ -1.72
CDKL5-201ENST00000379989 SACSQ9NZJ4 4579 aa4.28□□□□□ -1.72
CDKL5-201ENST00000379989 SSBP3-AS1Q7Z2R9 100 aa4.27□□□□□ -1.73
CDKL5-201ENST00000379989 IGLV9-49A0A0B4J1Y8 123 aa4.27□□□□□ -1.73
CDKL5-201ENST00000379989 LY6G6CO95867 125 aa4.27□□□□□ -1.73
CDKL5-201ENST00000379989 CHTF8P0CG12 524 aa4.27□□□□□ -1.73
CDKL5-201ENST00000379989 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
CDKL5-201ENST00000379989 NBEAL1Q6ZS30 2694 aa4.26□□□□□ -1.73
CDKL5-201ENST00000379989 DNAH2Q9P225 4427 aa4.26□□□□□ -1.73
CDKL5-201ENST00000379989 IGKV2-30P06310 120 aa4.25□□□□□ -1.73
CDKL5-201ENST00000379989 PSORS1C2Q9UIG4 136 aa4.25□□□□□ -1.73
CDKL5-201ENST00000379989 RYR2Q92736 4967 aa4.25□□□□□ -1.73
CDKL5-201ENST00000379989 PANO1I0J062 215 aa4.25□□□□□ -1.73
CDKL5-201ENST00000379989 KMT2AQ03164 3969 aa4.24□□□□□ -1.73
CDKL5-201ENST00000379989 FAT2Q9NYQ8 4349 aa4.24□□□□□ -1.73
CDKL5-201ENST00000379989 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.24□□□□□ -1.73
CDKL5-201ENST00000379989 RYR3Q15413 4870 aa4.24□□□□□ -1.73
CDKL5-201ENST00000379989 PKD1P98161 4303 aa4.24□□□□□ -1.73
CDKL5-201ENST00000379989 MGAM2Q2M2H8 2515 aa4.24□□□□□ -1.73
CDKL5-201ENST00000379989 DNAH17Q9UFH2 4485 aa4.23□□□□□ -1.73
CDKL5-201ENST00000379989 KMT2CQ8NEZ4 4911 aaKnown RBP4.23□□□□□ -1.73
CDKL5-201ENST00000379989 NOTCH1P46531 2555 aa4.23□□□□□ -1.73
CDKL5-201ENST00000379989 DNAH8Q96JB1 4490 aa4.23□□□□□ -1.73
CDKL5-201ENST00000379989 HECTD4Q9Y4D8 3996 aa4.23□□□□□ -1.73
CDKL5-201ENST00000379989 FAM229AH3BQW9 127 aa4.22□□□□□ -1.73
CDKL5-201ENST00000379989 SPINK1P00995 79 aa4.21□□□□□ -1.74
CDKL5-201ENST00000379989 SPINK6Q6UWN8 80 aa4.21□□□□□ -1.74
CDKL5-201ENST00000379989 STAB2Q8WWQ8 2551 aa4.19□□□□□ -1.74
CDKL5-201ENST00000379989 TPRXLQ17RH7 258 aa4.19□□□□□ -1.74
CDKL5-201ENST00000379989 DNAH11Q96DT5 4516 aa4.18□□□□□ -1.74
CDKL5-201ENST00000379989 IGKV2D-30A0A075B6S6 120 aa4.18□□□□□ -1.74
CDKL5-201ENST00000379989 RPS29P62273 56 aaKnown RBP4.18□□□□□ -1.74
CDKL5-201ENST00000379989 TYMSOSQ8TAI1 123 aa4.18□□□□□ -1.74
CDKL5-201ENST00000379989 A0A1B0GU33 70 aa4.17□□□□□ -1.74
CDKL5-201ENST00000379989 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
CDKL5-201ENST00000379989 H1FX-AS1Q4G0G2 97 aa4.15□□□□□ -1.75
CDKL5-201ENST00000379989 CIRBP-AS1Q8TBR5 109 aa4.14□□□□□ -1.75
CDKL5-201ENST00000379989 K7ERS5 55 aa4.13□□□□□ -1.75
CDKL5-201ENST00000379989 ANAPC11Q9NYG5 84 aa4.12□□□□□ -1.75
CDKL5-201ENST00000379989 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
CDKL5-201ENST00000379989 TGP01266 2768 aa4.11□□□□□ -1.75
CDKL5-201ENST00000379989 Q8N1X5 172 aa4.11□□□□□ -1.75
CDKL5-201ENST00000379989 KRTAP10-2P60368 255 aa4.1□□□□□ -1.75
CDKL5-201ENST00000379989 DNAH5Q8TE73 4624 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms