RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 IGFL1Q6UW32 110 aa9.07□□□□□ -0.96
PDLIM4-202ENST00000379018 Q6JHZ5 121 aa9.06□□□□□ -0.96
PDLIM4-202ENST00000379018 KRTAP19-1Q8IUB9 90 aa9.05□□□□□ -0.96
PDLIM4-202ENST00000379018 ORMDL1Q9P0S3 153 aa9.05□□□□□ -0.96
PDLIM4-202ENST00000379018 GHRHP01286 108 aa9.03□□□□□ -0.96
PDLIM4-202ENST00000379018 MT2AP02795 61 aa9.03□□□□□ -0.96
PDLIM4-202ENST00000379018 LINC00575Q6W349 94 aa9.03□□□□□ -0.96
PDLIM4-202ENST00000379018 Q6ZQY7 126 aa9.03□□□□□ -0.96
PDLIM4-202ENST00000379018 TMEM256-PLSCR3K7ERE1 68 aa9.02□□□□□ -0.97
PDLIM4-202ENST00000379018 JMJD7-PLA2G4BH0Y9G9 81 aa9.01□□□□□ -0.97
PDLIM4-202ENST00000379018 C21orf62-AS1Q17RA5 79 aa9.01□□□□□ -0.97
PDLIM4-202ENST00000379018 FAM236DA0A1B0GTK5 79 aa9□□□□□ -0.97
PDLIM4-202ENST00000379018 FAM236CP0DP71 79 aa9□□□□□ -0.97
PDLIM4-202ENST00000379018 PCP4P48539 62 aa9□□□□□ -0.97
PDLIM4-202ENST00000379018 LCE2BO14633 110 aa8.99□□□□□ -0.97
PDLIM4-202ENST00000379018 hADV29S1A0JD25 119 aa8.98□□□□□ -0.97
PDLIM4-202ENST00000379018 MT1FP04733 61 aa8.97□□□□□ -0.97
PDLIM4-202ENST00000379018 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.97□□□□□ -0.97
PDLIM4-202ENST00000379018 C20orf166-AS1Q96NR2 134 aa8.96□□□□□ -0.98
PDLIM4-202ENST00000379018 A8MUU9 505 aa8.94□□□□□ -0.98
PDLIM4-202ENST00000379018 KRTAP10-10P60014 251 aa8.94□□□□□ -0.98
PDLIM4-202ENST00000379018 IMUPQ9GZP8 106 aa8.94□□□□□ -0.98
PDLIM4-202ENST00000379018 MT-ATP8P03928 68 aa8.92□□□□□ -0.98
PDLIM4-202ENST00000379018 SYNE2Q8WXH0 6885 aaKnown RBP8.91□□□□□ -0.98
PDLIM4-202ENST00000379018 DSCR10P59022 87 aa8.91□□□□□ -0.98
PDLIM4-202ENST00000379018 LINC00643Q86TS7 51 aa8.91□□□□□ -0.98
PDLIM4-202ENST00000379018 LOC110117498A0A087WWA1 95 aa8.9□□□□□ -0.98
PDLIM4-202ENST00000379018 PDE6GP18545 87 aa8.9□□□□□ -0.98
PDLIM4-202ENST00000379018 CCKP06307 115 aa8.89□□□□□ -0.99
PDLIM4-202ENST00000379018 KRTAP9-3Q9BYQ3 159 aa8.89□□□□□ -0.99
PDLIM4-202ENST00000379018 SS18L2Q9UHA2 77 aa8.89□□□□□ -0.99
PDLIM4-202ENST00000379018 C14orf132Q9NPU4 83 aa8.86□□□□□ -0.99
PDLIM4-202ENST00000379018 MACF1Q9UPN3 7388 aaKnown RBP8.85□□□□□ -0.99
PDLIM4-202ENST00000379018 KRTAP16-1A8MUX0 517 aa8.84□□□□□ -0.99
PDLIM4-202ENST00000379018 RBM12B-AS1Q9P1G2 102 aa8.84□□□□□ -0.99
PDLIM4-202ENST00000379018 A0A087WSZ3 146 aa8.83□□□□□ -1
PDLIM4-202ENST00000379018 RBM3P98179 157 aaKnown RBP8.83□□□□□ -1
PDLIM4-202ENST00000379018 TRBV7-4A0A0J9YYF1 115 aa8.82□□□□□ -1
PDLIM4-202ENST00000379018 ATP5EP2Q5VTU8 51 aa8.82□□□□□ -1
PDLIM4-202ENST00000379018 Q6ZQT0 140 aa8.82□□□□□ -1
PDLIM4-202ENST00000379018 A0A1B0GW54 56 aa8.8□□□□□ -1
PDLIM4-202ENST00000379018 HRES1P13985 223 aa8.78□□□□□ -1
PDLIM4-202ENST00000379018 LINC00846Q9NV44 126 aa8.78□□□□□ -1
PDLIM4-202ENST00000379018 A0A1B0GV72 72 aa8.77□□□□□ -1.01
PDLIM4-202ENST00000379018 DSCR8Q96T75 97 aa8.77□□□□□ -1.01
PDLIM4-202ENST00000379018 NDUFV3P56181 108 aaKnown RBP8.76□□□□□ -1.01
PDLIM4-202ENST00000379018 LINC00313P59037 77 aa8.75□□□□□ -1.01
PDLIM4-202ENST00000379018 MPLKIPQ8TAP9 179 aa8.74□□□□□ -1.01
PDLIM4-202ENST00000379018 HIST1H4AP62805 103 aaKnown RBP8.72□□□□□ -1.01
PDLIM4-202ENST00000379018 UBL5Q9BZL1 73 aa8.72□□□□□ -1.01
PDLIM4-202ENST00000379018 KRTAP19-6Q3LI70 58 aa8.71□□□□□ -1.02
PDLIM4-202ENST00000379018 IGKV4-1P06312 121 aa8.7□□□□□ -1.02
PDLIM4-202ENST00000379018 NOTCH2NLQ7Z3S9 236 aa8.69□□□□□ -1.02
PDLIM4-202ENST00000379018 CXCL6P80162 114 aa8.67□□□□□ -1.02
PDLIM4-202ENST00000379018 ANAPC13Q9BS18 74 aa8.67□□□□□ -1.02
PDLIM4-202ENST00000379018 A0A1W2PNM2 257 aa8.65□□□□□ -1.02
PDLIM4-202ENST00000379018 DEFB116Q30KQ4 102 aa8.65□□□□□ -1.02
PDLIM4-202ENST00000379018 IGHV6-1A0A0B4J1U7 121 aa8.63□□□□□ -1.03
PDLIM4-202ENST00000379018 Q6ZVQ6 151 aa8.63□□□□□ -1.03
PDLIM4-202ENST00000379018 FAM236AA0A1B0GUQ0 79 aa8.62□□□□□ -1.03
PDLIM4-202ENST00000379018 FAM236BA0A1B0GV22 79 aa8.62□□□□□ -1.03
PDLIM4-202ENST00000379018 ATOX1O00244 68 aa8.62□□□□□ -1.03
PDLIM4-202ENST00000379018 KRTAP6-3Q3LI67 103 aa8.59□□□□□ -1.03
PDLIM4-202ENST00000379018 Q8N9P0 234 aaPredicted RBP8.58□□□□□ -1.04
PDLIM4-202ENST00000379018 IGKV3D-7A0A0C4DH55 119 aa8.56□□□□□ -1.04
PDLIM4-202ENST00000379018 A8MWP4 228 aa8.54□□□□□ -1.04
PDLIM4-202ENST00000379018 UQCRQO14949 82 aa8.52□□□□□ -1.05
PDLIM4-202ENST00000379018 SPINK7P58062 85 aa8.52□□□□□ -1.05
PDLIM4-202ENST00000379018 LINC00472Q9H8W2 130 aa8.52□□□□□ -1.05
PDLIM4-202ENST00000379018 SMIM20Q8N5G0 67 aa8.51□□□□□ -1.05
PDLIM4-202ENST00000379018 ZCCHC13Q8WW36 166 aaKnown RBP8.51□□□□□ -1.05
PDLIM4-202ENST00000379018 COX7CP15954 63 aa8.5□□□□□ -1.05
PDLIM4-202ENST00000379018 NREPQ16612 68 aa8.5□□□□□ -1.05
PDLIM4-202ENST00000379018 A0A087WVE0 104 aa8.48□□□□□ -1.05
PDLIM4-202ENST00000379018 SERP2Q8N6R1 65 aa8.48□□□□□ -1.05
PDLIM4-202ENST00000379018 A0A1B0GVX0 72 aa8.47□□□□□ -1.05
PDLIM4-202ENST00000379018 WFDC13Q8IUB5 93 aa8.47□□□□□ -1.05
PDLIM4-202ENST00000379018 C8orf87E5RJ46 101 aa8.46□□□□□ -1.06
PDLIM4-202ENST00000379018 CCDC179H3BU77 68 aa8.44□□□□□ -1.06
PDLIM4-202ENST00000379018 BPY2O14599 106 aa8.44□□□□□ -1.06
PDLIM4-202ENST00000379018 TRAV7A0A075B6U4 112 aa8.4□□□□□ -1.06
PDLIM4-202ENST00000379018 NEBP20929 6669 aa8.4□□□□□ -1.06
PDLIM4-202ENST00000379018 J3KT08 172 aa8.32□□□□□ -1.08
PDLIM4-202ENST00000379018 KLKP1Q107X0 134 aa8.31□□□□□ -1.08
PDLIM4-202ENST00000379018 OCR1Q9BZK8 76 aa8.29□□□□□ -1.08
PDLIM4-202ENST00000379018 NDUFB1O75438 58 aa8.28□□□□□ -1.08
PDLIM4-202ENST00000379018 TMEM258P61165 79 aa8.28□□□□□ -1.08
PDLIM4-202ENST00000379018 K7EQZ3 153 aa8.26□□□□□ -1.09
PDLIM4-202ENST00000379018 H1FX-AS1Q4G0G2 97 aa8.26□□□□□ -1.09
PDLIM4-202ENST00000379018 C8orf17Q9NRJ1 99 aa8.26□□□□□ -1.09
PDLIM4-202ENST00000379018 NDUFC1O43677 76 aa8.25□□□□□ -1.09
PDLIM4-202ENST00000379018 Q8N9L7 120 aa8.25□□□□□ -1.09
PDLIM4-202ENST00000379018 MUC12Q9UKN1 5478 aa8.24□□□□□ -1.09
PDLIM4-202ENST00000379018 HCG22E2RYF7 251 aa8.24□□□□□ -1.09
PDLIM4-202ENST00000379018 KRTAP20-1Q3LI63 56 aa8.24□□□□□ -1.09
PDLIM4-202ENST00000379018 A6NN06 94 aa8.22□□□□□ -1.09
PDLIM4-202ENST00000379018 PRR15Q8IV56 129 aa8.22□□□□□ -1.09
PDLIM4-202ENST00000379018 C20orf197Q8N268 126 aa8.19□□□□□ -1.1
PDLIM4-202ENST00000379018 TMEM254Q8TBM7 123 aa8.17□□□□□ -1.1
PDLIM4-202ENST00000379018 RPS28P62857 69 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms