RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ANAPC11Q9NYG5 84 aa5.27□□□□□ -1.57
VPS36-201ENST00000378060 CYSTM1Q9H1C7 97 aa5.26□□□□□ -1.57
VPS36-201ENST00000378060 STARD9Q9P2P6 4700 aa5.25□□□□□ -1.57
VPS36-201ENST00000378060 FP248Q71RG6 208 aaPredicted RBP5.25□□□□□ -1.57
VPS36-201ENST00000378060 PRR26Q8N8Z3 221 aa5.24□□□□□ -1.57
VPS36-201ENST00000378060 Q75L30 129 aa5.24□□□□□ -1.57
VPS36-201ENST00000378060 SPRR1BP22528 89 aa5.23□□□□□ -1.57
VPS36-201ENST00000378060 Q8N9P0 234 aaPredicted RBP5.23□□□□□ -1.57
VPS36-201ENST00000378060 SPINT4Q6UDR6 99 aa5.22□□□□□ -1.57
VPS36-201ENST00000378060 PLECQ15149 4684 aaKnown RBP5.22□□□□□ -1.57
VPS36-201ENST00000378060 MMP24-AS1A0A0U1RRL7 71 aa5.22□□□□□ -1.57
VPS36-201ENST00000378060 LINC01558Q9Y6Z2 57 aa5.21□□□□□ -1.58
VPS36-201ENST00000378060 CRIPTQ9P021 101 aa5.2□□□□□ -1.58
VPS36-201ENST00000378060 LINC00472Q9H8W2 130 aa5.19□□□□□ -1.58
VPS36-201ENST00000378060 FAM229BQ4G0N7 80 aa5.19□□□□□ -1.58
VPS36-201ENST00000378060 KRTAP26-1Q6PEX3 210 aa5.18□□□□□ -1.58
VPS36-201ENST00000378060 DNAH1Q9P2D7 4330 aa5.18□□□□□ -1.58
VPS36-201ENST00000378060 HRES1P13985 223 aa5.17□□□□□ -1.58
VPS36-201ENST00000378060 DYNC2H1Q8NCM8 4307 aaKnown RBP5.17□□□□□ -1.58
VPS36-201ENST00000378060 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.17□□□□□ -1.58
VPS36-201ENST00000378060 C9orf92A6NGG3 77 aa5.16□□□□□ -1.58
VPS36-201ENST00000378060 TNP2Q05952 138 aa5.16□□□□□ -1.58
VPS36-201ENST00000378060 Q8N1X5 172 aa5.16□□□□□ -1.58
VPS36-201ENST00000378060 OXTP01178 125 aa5.15□□□□□ -1.58
VPS36-201ENST00000378060 PLAC8Q9NZF1 115 aa5.14□□□□□ -1.59
VPS36-201ENST00000378060 Q5VV11 94 aa5.14□□□□□ -1.59
VPS36-201ENST00000378060 KMT2AQ03164 3969 aa5.14□□□□□ -1.59
VPS36-201ENST00000378060 DNAH10Q8IVF4 4471 aa5.13□□□□□ -1.59
VPS36-201ENST00000378060 HYDINQ4G0P3 5121 aa5.12□□□□□ -1.59
VPS36-201ENST00000378060 RBM12B-AS1Q9P1G2 102 aa5.12□□□□□ -1.59
VPS36-201ENST00000378060 KRTAP4-16G5E9R7 235 aaPredicted RBP5.11□□□□□ -1.59
VPS36-201ENST00000378060 SMR3BP02814 79 aaPredicted RBP5.11□□□□□ -1.59
VPS36-201ENST00000378060 A0A1B0GU33 70 aa5.1□□□□□ -1.59
VPS36-201ENST00000378060 KMT2CQ8NEZ4 4911 aaKnown RBP5.09□□□□□ -1.59
VPS36-201ENST00000378060 FLG2Q5D862 2391 aaPredicted RBP5.08□□□□□ -1.6
VPS36-201ENST00000378060 VPS13DQ5THJ4 4388 aa5.08□□□□□ -1.6
VPS36-201ENST00000378060 Q5W150 140 aa5.08□□□□□ -1.6
VPS36-201ENST00000378060 DNAH2Q9P225 4427 aa5.07□□□□□ -1.6
VPS36-201ENST00000378060 ZCCHC13Q8WW36 166 aaKnown RBP5.07□□□□□ -1.6
VPS36-201ENST00000378060 KRTAP29-1A8MX34 341 aaPredicted RBP5.07□□□□□ -1.6
VPS36-201ENST00000378060 LINC01554Q52M75 96 aa5.06□□□□□ -1.6
VPS36-201ENST00000378060 FRAS1Q86XX4 4008 aa5.06□□□□□ -1.6
VPS36-201ENST00000378060 KRTAP1-5Q9BYS1 174 aa5.06□□□□□ -1.6
VPS36-201ENST00000378060 A0A0D9SG42 100 aa5.05□□□□□ -1.6
VPS36-201ENST00000378060 SPINK7P58062 85 aa5.05□□□□□ -1.6
VPS36-201ENST00000378060 Q6ZR54 194 aa5.05□□□□□ -1.6
VPS36-201ENST00000378060 SACSQ9NZJ4 4579 aa5.04□□□□□ -1.6
VPS36-201ENST00000378060 LINC00483Q53H64 154 aa5.03□□□□□ -1.6
VPS36-201ENST00000378060 COX6B2Q6YFQ2 88 aa5.03□□□□□ -1.61
VPS36-201ENST00000378060 DMAC1Q96GE9 116 aa5.02□□□□□ -1.61
VPS36-201ENST00000378060 J3QL48 77 aa5.01□□□□□ -1.61
VPS36-201ENST00000378060 DMBT1Q9UGM3 2413 aaPredicted RBP5.01□□□□□ -1.61
VPS36-201ENST00000378060 RYR3Q15413 4870 aa5.01□□□□□ -1.61
VPS36-201ENST00000378060 LCE6AA0A183 80 aa5□□□□□ -1.61
VPS36-201ENST00000378060 ALMS1Q8TCU4 4167 aa4.99□□□□□ -1.61
VPS36-201ENST00000378060 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
VPS36-201ENST00000378060 ASB16-AS1Q495Z4 193 aa4.98□□□□□ -1.61
VPS36-201ENST00000378060 RYR2Q92736 4967 aa4.97□□□□□ -1.61
VPS36-201ENST00000378060 Q6ZSA8 131 aa4.96□□□□□ -1.62
VPS36-201ENST00000378060 CSAG1Q6PB30 78 aa4.94□□□□□ -1.62
VPS36-201ENST00000378060 FAT2Q9NYQ8 4349 aa4.94□□□□□ -1.62
VPS36-201ENST00000378060 HECTD4Q9Y4D8 3996 aa4.94□□□□□ -1.62
VPS36-201ENST00000378060 LUZP6Q538Z0 58 aa4.94□□□□□ -1.62
VPS36-201ENST00000378060 DNAH6Q9C0G6 4158 aa4.93□□□□□ -1.62
VPS36-201ENST00000378060 PKHD1P08F94 4074 aa4.92□□□□□ -1.62
VPS36-201ENST00000378060 PANO1I0J062 215 aa4.92□□□□□ -1.62
VPS36-201ENST00000378060 DNAH17Q9UFH2 4485 aa4.91□□□□□ -1.62
VPS36-201ENST00000378060 PKD1P98161 4303 aa4.91□□□□□ -1.62
VPS36-201ENST00000378060 S4R3F8 94 aa4.9□□□□□ -1.62
VPS36-201ENST00000378060 DNAH11Q96DT5 4516 aa4.9□□□□□ -1.63
VPS36-201ENST00000378060 RPL37P61927 97 aaKnown RBP4.9□□□□□ -1.63
VPS36-201ENST00000378060 SPATA8Q6RVD6 105 aa4.9□□□□□ -1.63
VPS36-201ENST00000378060 KRTAP7-1Q8IUC3 87 aa4.89□□□□□ -1.63
VPS36-201ENST00000378060 KRTAP10-1P60331 282 aa4.88□□□□□ -1.63
VPS36-201ENST00000378060 CAMK2N1Q7Z7J9 78 aa4.88□□□□□ -1.63
VPS36-201ENST00000378060 H1FX-AS1Q4G0G2 97 aa4.87□□□□□ -1.63
VPS36-201ENST00000378060 A0A087X002 238 aa4.86□□□□□ -1.63
VPS36-201ENST00000378060 NOTCH2NLQ7Z3S9 236 aa4.86□□□□□ -1.63
VPS36-201ENST00000378060 DNAH5Q8TE73 4624 aa4.86□□□□□ -1.63
VPS36-201ENST00000378060 KRTAP10-2P60368 255 aa4.86□□□□□ -1.63
VPS36-201ENST00000378060 KRTAP11-1Q8IUC1 163 aa4.86□□□□□ -1.63
VPS36-201ENST00000378060 ROMO1P60602 79 aa4.85□□□□□ -1.63
VPS36-201ENST00000378060 H3BS24 57 aa4.85□□□□□ -1.63
VPS36-201ENST00000378060 A6NN06 94 aa4.84□□□□□ -1.63
VPS36-201ENST00000378060 KRTAP13-1Q8IUC0 172 aa4.84□□□□□ -1.63
VPS36-201ENST00000378060 Q6ZRN7 208 aaPredicted RBP4.84□□□□□ -1.63
VPS36-201ENST00000378060 EPPK1P58107 5090 aaKnown RBP4.83□□□□□ -1.64
VPS36-201ENST00000378060 RPS29P62273 56 aaKnown RBP4.81□□□□□ -1.64
VPS36-201ENST00000378060 R4GN34 69 aa4.81□□□□□ -1.64
VPS36-201ENST00000378060 DNAH8Q96JB1 4490 aa4.79□□□□□ -1.64
VPS36-201ENST00000378060 SEC61BP60468 96 aaKnown RBP4.77□□□□□ -1.65
VPS36-201ENST00000378060 LRP1BQ9NZR2 4599 aa4.77□□□□□ -1.65
VPS36-201ENST00000378060 DYNC1H1Q14204 4646 aaKnown RBP4.76□□□□□ -1.65
VPS36-201ENST00000378060 A0A0A0MQY5 61 aa4.74□□□□□ -1.65
VPS36-201ENST00000378060 Q5VSD8 79 aa4.73□□□□□ -1.65
VPS36-201ENST00000378060 KRTAP13-2Q52LG2 175 aa4.73□□□□□ -1.65
VPS36-201ENST00000378060 SRRM2Q9UQ35 2752 aaKnown RBP4.72□□□□□ -1.65
VPS36-201ENST00000378060 A8MU10 97 aa4.71□□□□□ -1.65
VPS36-201ENST00000378060 M0QZ58 72 aa4.71□□□□□ -1.65
VPS36-201ENST00000378060 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms