RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 MEGF8Q7Z7M0 2845 aa9.37□□□□□ -0.91
CSNK1A1-202ENST00000377843 DNAH9Q9NYC9 4486 aa9.37□□□□□ -0.91
CSNK1A1-202ENST00000377843 PRKDCP78527 4128 aaKnown RBP9.35□□□□□ -0.91
CSNK1A1-202ENST00000377843 RTL8CO15255 209 aa9.34□□□□□ -0.91
CSNK1A1-202ENST00000377843 KRTAP13-1Q8IUC0 172 aa9.34□□□□□ -0.91
CSNK1A1-202ENST00000377843 KRTAP13-3Q3SY46 172 aa9.32□□□□□ -0.92
CSNK1A1-202ENST00000377843 DNAH7Q8WXX0 4024 aa9.32□□□□□ -0.92
CSNK1A1-202ENST00000377843 H3BS24 57 aa9.31□□□□□ -0.92
CSNK1A1-202ENST00000377843 PANO1I0J062 215 aa9.3□□□□□ -0.92
CSNK1A1-202ENST00000377843 ACYP2P14621 99 aa9.27□□□□□ -0.92
CSNK1A1-202ENST00000377843 SPATA8Q6RVD6 105 aa9.27□□□□□ -0.92
CSNK1A1-202ENST00000377843 CDK2AP2O75956 126 aa9.26□□□□□ -0.93
CSNK1A1-202ENST00000377843 TGP01266 2768 aa9.25□□□□□ -0.93
CSNK1A1-202ENST00000377843 A0A1B0GU69 56 aa9.24□□□□□ -0.93
CSNK1A1-202ENST00000377843 ANAPC11Q9NYG5 84 aa9.24□□□□□ -0.93
CSNK1A1-202ENST00000377843 PLECQ15149 4684 aaKnown RBP9.23□□□□□ -0.93
CSNK1A1-202ENST00000377843 DMAC1Q96GE9 116 aa9.22□□□□□ -0.93
CSNK1A1-202ENST00000377843 LINC00483Q53H64 154 aa9.2□□□□□ -0.94
CSNK1A1-202ENST00000377843 WWC2-AS2Q96NR7 200 aa9.2□□□□□ -0.94
CSNK1A1-202ENST00000377843 CSAG1Q6PB30 78 aa9.19□□□□□ -0.94
CSNK1A1-202ENST00000377843 STARD9Q9P2P6 4700 aa9.19□□□□□ -0.94
CSNK1A1-202ENST00000377843 MIR22HGQ0VDD5 57 aa9.19□□□□□ -0.94
CSNK1A1-202ENST00000377843 SPINK6Q6UWN8 80 aa9.18□□□□□ -0.94
CSNK1A1-202ENST00000377843 FBN3Q75N90 2809 aa9.16□□□□□ -0.94
CSNK1A1-202ENST00000377843 DNAH8Q96JB1 4490 aa9.16□□□□□ -0.94
CSNK1A1-202ENST00000377843 FRAS1Q86XX4 4008 aa9.15□□□□□ -0.94
CSNK1A1-202ENST00000377843 RETNLBQ9BQ08 111 aa9.13□□□□□ -0.95
CSNK1A1-202ENST00000377843 UQCR11O14957 56 aa9.13□□□□□ -0.95
CSNK1A1-202ENST00000377843 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.12□□□□□ -0.95
CSNK1A1-202ENST00000377843 C14orf177Q52M58 125 aa9.1□□□□□ -0.95
CSNK1A1-202ENST00000377843 KMT2AQ03164 3969 aa9.07□□□□□ -0.96
CSNK1A1-202ENST00000377843 ZNF861PO60384 105 aa9.06□□□□□ -0.96
CSNK1A1-202ENST00000377843 DYNC2H1Q8NCM8 4307 aaKnown RBP9.05□□□□□ -0.96
CSNK1A1-202ENST00000377843 SPACA4Q8TDM5 124 aa9.04□□□□□ -0.96
CSNK1A1-202ENST00000377843 IGKV2-30P06310 120 aa9.03□□□□□ -0.96
CSNK1A1-202ENST00000377843 UBE2DNLQ8IWF7 75 aa9.03□□□□□ -0.96
CSNK1A1-202ENST00000377843 PSORS1C2Q9UIG4 136 aa9.03□□□□□ -0.96
CSNK1A1-202ENST00000377843 APLNQ9ULZ1 77 aa9.03□□□□□ -0.96
CSNK1A1-202ENST00000377843 ZNF706Q9Y5V0 76 aaPredicted RBP9.03□□□□□ -0.96
CSNK1A1-202ENST00000377843 CIRBP-AS1Q8TBR5 109 aa8.98□□□□□ -0.97
CSNK1A1-202ENST00000377843 FAM229AH3BQW9 127 aa8.98□□□□□ -0.97
CSNK1A1-202ENST00000377843 IGLV5-52A0A0A0MRZ9 124 aa8.97□□□□□ -0.97
CSNK1A1-202ENST00000377843 Q6ZRN7 208 aaPredicted RBP8.95□□□□□ -0.98
CSNK1A1-202ENST00000377843 DNAH17Q9UFH2 4485 aa8.95□□□□□ -0.98
CSNK1A1-202ENST00000377843 IGLV7-43P04211 117 aa8.95□□□□□ -0.98
CSNK1A1-202ENST00000377843 DNAH2Q9P225 4427 aa8.92□□□□□ -0.98
CSNK1A1-202ENST00000377843 C1orf134Q5TEV5 83 aa8.92□□□□□ -0.98
CSNK1A1-202ENST00000377843 VPS13DQ5THJ4 4388 aa8.91□□□□□ -0.98
CSNK1A1-202ENST00000377843 HECTD4Q9Y4D8 3996 aa8.91□□□□□ -0.98
CSNK1A1-202ENST00000377843 IGKV2D-30A0A075B6S6 120 aa8.89□□□□□ -0.99
CSNK1A1-202ENST00000377843 NUPR2A6NF83 97 aa8.89□□□□□ -0.99
CSNK1A1-202ENST00000377843 NBDYA0A0U1RRE5 68 aa8.88□□□□□ -0.99
CSNK1A1-202ENST00000377843 KRTAP16-1A8MUX0 517 aa8.87□□□□□ -0.99
CSNK1A1-202ENST00000377843 SPINK1P00995 79 aa8.86□□□□□ -0.99
CSNK1A1-202ENST00000377843 A8MUU9 505 aa8.83□□□□□ -1
CSNK1A1-202ENST00000377843 HYDINQ4G0P3 5121 aa8.83□□□□□ -1
CSNK1A1-202ENST00000377843 KRTAP25-1Q3LHN0 102 aa8.83□□□□□ -1
CSNK1A1-202ENST00000377843 H0YAA0 97 aa8.82□□□□□ -1
CSNK1A1-202ENST00000377843 Q6ZSA8 131 aa8.8□□□□□ -1
CSNK1A1-202ENST00000377843 ROMO1P60602 79 aa8.8□□□□□ -1
CSNK1A1-202ENST00000377843 LINC00304Q8N9R0 145 aa8.8□□□□□ -1
CSNK1A1-202ENST00000377843 LY6G6CO95867 125 aa8.79□□□□□ -1
CSNK1A1-202ENST00000377843 A0A087WTM6 91 aa8.78□□□□□ -1
CSNK1A1-202ENST00000377843 Q8N1X5 172 aa8.77□□□□□ -1
CSNK1A1-202ENST00000377843 KRTAP21-3Q3LHN1 58 aa8.76□□□□□ -1.01
CSNK1A1-202ENST00000377843 SSBP3-AS1Q7Z2R9 100 aa8.76□□□□□ -1.01
CSNK1A1-202ENST00000377843 DNAH6Q9C0G6 4158 aa8.73□□□□□ -1.01
CSNK1A1-202ENST00000377843 TYMSOSQ8TAI1 123 aa8.72□□□□□ -1.01
CSNK1A1-202ENST00000377843 KRTAP13-2Q52LG2 175 aa8.7□□□□□ -1.02
CSNK1A1-202ENST00000377843 CRIPTQ9P021 101 aa8.7□□□□□ -1.02
CSNK1A1-202ENST00000377843 FLG2Q5D862 2391 aaPredicted RBP8.69□□□□□ -1.02
CSNK1A1-202ENST00000377843 DNAH11Q96DT5 4516 aa8.65□□□□□ -1.02
CSNK1A1-202ENST00000377843 P0C880 135 aa8.65□□□□□ -1.02
CSNK1A1-202ENST00000377843 DNAH5Q8TE73 4624 aa8.62□□□□□ -1.03
CSNK1A1-202ENST00000377843 A0A1B0GU33 70 aa8.61□□□□□ -1.03
CSNK1A1-202ENST00000377843 SACSQ9NZJ4 4579 aa8.6□□□□□ -1.03
CSNK1A1-202ENST00000377843 FAT2Q9NYQ8 4349 aa8.59□□□□□ -1.03
CSNK1A1-202ENST00000377843 H1FX-AS1Q4G0G2 97 aa8.57□□□□□ -1.04
CSNK1A1-202ENST00000377843 KMT2CQ8NEZ4 4911 aaKnown RBP8.56□□□□□ -1.04
CSNK1A1-202ENST00000377843 KRTAP10-2P60368 255 aa8.56□□□□□ -1.04
CSNK1A1-202ENST00000377843 PKD1P98161 4303 aa8.54□□□□□ -1.04
CSNK1A1-202ENST00000377843 LRP1BQ9NZR2 4599 aa8.54□□□□□ -1.04
CSNK1A1-202ENST00000377843 PKHD1P08F94 4074 aa8.53□□□□□ -1.04
CSNK1A1-202ENST00000377843 KRTAP3-1Q9BYR8 98 aa8.53□□□□□ -1.04
CSNK1A1-202ENST00000377843 KRTAP1-4P0C5Y4 121 aa8.47□□□□□ -1.05
CSNK1A1-202ENST00000377843 COX6B2Q6YFQ2 88 aa8.41□□□□□ -1.06
CSNK1A1-202ENST00000377843 KRTAP10-1P60331 282 aa8.41□□□□□ -1.06
CSNK1A1-202ENST00000377843 RYR2Q92736 4967 aa8.39□□□□□ -1.07
CSNK1A1-202ENST00000377843 VPS13BQ7Z7G8 4022 aa8.36□□□□□ -1.07
CSNK1A1-202ENST00000377843 TPRXLQ17RH7 258 aa8.36□□□□□ -1.07
CSNK1A1-202ENST00000377843 K7ERS5 55 aa8.36□□□□□ -1.07
CSNK1A1-202ENST00000377843 RYR3Q15413 4870 aa8.33□□□□□ -1.08
CSNK1A1-202ENST00000377843 DYNC1H1Q14204 4646 aaKnown RBP8.33□□□□□ -1.08
CSNK1A1-202ENST00000377843 SPINT4Q6UDR6 99 aa8.3□□□□□ -1.08
CSNK1A1-202ENST00000377843 C9orf92A6NGG3 77 aa8.29□□□□□ -1.08
CSNK1A1-202ENST00000377843 FAT1Q14517 4588 aa8.28□□□□□ -1.08
CSNK1A1-202ENST00000377843 C10orf95Q9H7T3 257 aa8.27□□□□□ -1.08
CSNK1A1-202ENST00000377843 KRTAP13-4Q3LI77 160 aa8.26□□□□□ -1.09
CSNK1A1-202ENST00000377843 NDUFAF8A1L188 74 aa8.24□□□□□ -1.09
CSNK1A1-202ENST00000377843 SMR3BP02814 79 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms