RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 H7BZZ5 65 aa5.06□□□□□ -1.6
CRNKL1-202ENST00000377340 ANK3Q12955 4377 aaKnown RBP5.06□□□□□ -1.6
CRNKL1-202ENST00000377340 LINC01554Q52M75 96 aa5.04□□□□□ -1.6
CRNKL1-202ENST00000377340 KRTAP7-1Q8IUC3 87 aa5.04□□□□□ -1.6
CRNKL1-202ENST00000377340 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
CRNKL1-202ENST00000377340 M0R2T5 61 aa5.03□□□□□ -1.61
CRNKL1-202ENST00000377340 SPRR1BP22528 89 aa5.01□□□□□ -1.61
CRNKL1-202ENST00000377340 Q8N1X5 172 aa5.01□□□□□ -1.61
CRNKL1-202ENST00000377340 VPS13CQ709C8 3753 aa5.01□□□□□ -1.61
CRNKL1-202ENST00000377340 ZNF469Q96JG9 3925 aaPredicted RBP5.01□□□□□ -1.61
CRNKL1-202ENST00000377340 LOC101927531A0A1B0GV80 90 aa5□□□□□ -1.61
CRNKL1-202ENST00000377340 KRTAP4-16G5E9R7 235 aaPredicted RBP5□□□□□ -1.61
CRNKL1-202ENST00000377340 K7ERS5 55 aa5□□□□□ -1.61
CRNKL1-202ENST00000377340 IGLV8-61A0A075B6I0 122 aa5□□□□□ -1.61
CRNKL1-202ENST00000377340 ACYP2P14621 99 aa4.99□□□□□ -1.61
CRNKL1-202ENST00000377340 KLKP1Q107X0 134 aa4.96□□□□□ -1.62
CRNKL1-202ENST00000377340 MEGF8Q7Z7M0 2845 aa4.95□□□□□ -1.62
CRNKL1-202ENST00000377340 H3BPC8 53 aa4.94□□□□□ -1.62
CRNKL1-202ENST00000377340 SEC61BP60468 96 aaKnown RBP4.93□□□□□ -1.62
CRNKL1-202ENST00000377340 LINC00483Q53H64 154 aa4.93□□□□□ -1.62
CRNKL1-202ENST00000377340 LINC00472Q9H8W2 130 aa4.93□□□□□ -1.62
CRNKL1-202ENST00000377340 KRTAP13-2Q52LG2 175 aa4.92□□□□□ -1.62
CRNKL1-202ENST00000377340 SPINT4Q6UDR6 99 aa4.91□□□□□ -1.62
CRNKL1-202ENST00000377340 A0A1B0GU69 56 aa4.9□□□□□ -1.63
CRNKL1-202ENST00000377340 MMP24-AS1A0A0U1RRL7 71 aa4.89□□□□□ -1.63
CRNKL1-202ENST00000377340 SPINK7P58062 85 aa4.89□□□□□ -1.63
CRNKL1-202ENST00000377340 ZCCHC13Q8WW36 166 aaKnown RBP4.88□□□□□ -1.63
CRNKL1-202ENST00000377340 CYP4F30PQ9H0H9 118 aa4.88□□□□□ -1.63
CRNKL1-202ENST00000377340 KRTAP13-1Q8IUC0 172 aa4.87□□□□□ -1.63
CRNKL1-202ENST00000377340 Q8N9P0 234 aaPredicted RBP4.87□□□□□ -1.63
CRNKL1-202ENST00000377340 DNHD1Q96M86 4753 aa4.85□□□□□ -1.63
CRNKL1-202ENST00000377340 NOTCH2NLQ7Z3S9 236 aa4.85□□□□□ -1.63
CRNKL1-202ENST00000377340 Q1T7F1 81 aa4.84□□□□□ -1.63
CRNKL1-202ENST00000377340 COA5Q86WW8 74 aa4.83□□□□□ -1.64
CRNKL1-202ENST00000377340 A8MU10 97 aa4.83□□□□□ -1.64
CRNKL1-202ENST00000377340 CDC42SE1Q9NRR8 79 aa4.83□□□□□ -1.64
CRNKL1-202ENST00000377340 HRES1P13985 223 aa4.82□□□□□ -1.64
CRNKL1-202ENST00000377340 OCR1Q9BZK8 76 aa4.81□□□□□ -1.64
CRNKL1-202ENST00000377340 A0A1B0GVY2 172 aa4.81□□□□□ -1.64
CRNKL1-202ENST00000377340 KRTAP16-1A8MUX0 517 aa4.8□□□□□ -1.64
CRNKL1-202ENST00000377340 Q5W150 140 aa4.8□□□□□ -1.64
CRNKL1-202ENST00000377340 CSAG1Q6PB30 78 aa4.8□□□□□ -1.64
CRNKL1-202ENST00000377340 KRTAP1-4P0C5Y4 121 aa4.79□□□□□ -1.64
CRNKL1-202ENST00000377340 MIR22HGQ0VDD5 57 aa4.79□□□□□ -1.64
CRNKL1-202ENST00000377340 AKAP9Q99996 3911 aa4.78□□□□□ -1.64
CRNKL1-202ENST00000377340 Q5VV11 94 aa4.78□□□□□ -1.64
CRNKL1-202ENST00000377340 A0A0D9SG42 100 aa4.76□□□□□ -1.65
CRNKL1-202ENST00000377340 LUZP6Q538Z0 58 aa4.73□□□□□ -1.65
CRNKL1-202ENST00000377340 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
CRNKL1-202ENST00000377340 RPS29P62273 56 aaKnown RBP4.72□□□□□ -1.65
CRNKL1-202ENST00000377340 S4R3F8 94 aa4.71□□□□□ -1.66
CRNKL1-202ENST00000377340 A6NN06 94 aa4.69□□□□□ -1.66
CRNKL1-202ENST00000377340 ASB16-AS1Q495Z4 193 aa4.69□□□□□ -1.66
CRNKL1-202ENST00000377340 CSMD3Q7Z407 3707 aa4.68□□□□□ -1.66
CRNKL1-202ENST00000377340 Q75L30 129 aa4.68□□□□□ -1.66
CRNKL1-202ENST00000377340 UQCR11O14957 56 aa4.67□□□□□ -1.66
CRNKL1-202ENST00000377340 KRTAP29-1A8MX34 341 aaPredicted RBP4.67□□□□□ -1.66
CRNKL1-202ENST00000377340 SPANXA2-OT1Q8N9U9 137 aa4.67□□□□□ -1.66
CRNKL1-202ENST00000377340 RPL37P61927 97 aaKnown RBP4.66□□□□□ -1.66
CRNKL1-202ENST00000377340 CRIPTQ9P021 101 aa4.65□□□□□ -1.67
CRNKL1-202ENST00000377340 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
CRNKL1-202ENST00000377340 R4GN34 69 aa4.63□□□□□ -1.67
CRNKL1-202ENST00000377340 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
CRNKL1-202ENST00000377340 XP32Q5T750 250 aa4.62□□□□□ -1.67
CRNKL1-202ENST00000377340 KRTAP10-8P60410 259 aa4.61□□□□□ -1.67
CRNKL1-202ENST00000377340 C20orf166-AS1Q96NR2 134 aa4.6□□□□□ -1.67
CRNKL1-202ENST00000377340 HUWE1Q7Z6Z7 4374 aaKnown RBP4.6□□□□□ -1.67
CRNKL1-202ENST00000377340 A0A1B0GU33 70 aa4.59□□□□□ -1.68
CRNKL1-202ENST00000377340 KRTAP4-5Q9BYR2 181 aa4.57□□□□□ -1.68
CRNKL1-202ENST00000377340 ROMO1P60602 79 aa4.57□□□□□ -1.68
CRNKL1-202ENST00000377340 H1FX-AS1Q4G0G2 97 aa4.56□□□□□ -1.68
CRNKL1-202ENST00000377340 A8MUU9 505 aa4.56□□□□□ -1.68
CRNKL1-202ENST00000377340 TPRXLQ17RH7 258 aa4.56□□□□□ -1.68
CRNKL1-202ENST00000377340 M0QZ58 72 aa4.55□□□□□ -1.68
CRNKL1-202ENST00000377340 LINC01558Q9Y6Z2 57 aa4.54□□□□□ -1.68
CRNKL1-202ENST00000377340 KRTAP13-3Q3SY46 172 aa4.53□□□□□ -1.68
CRNKL1-202ENST00000377340 DMAC1Q96GE9 116 aa4.52□□□□□ -1.69
CRNKL1-202ENST00000377340 DNAH9Q9NYC9 4486 aa4.52□□□□□ -1.69
CRNKL1-202ENST00000377340 PRKDCP78527 4128 aaKnown RBP4.47□□□□□ -1.69
CRNKL1-202ENST00000377340 SPATA8Q6RVD6 105 aa4.45□□□□□ -1.7
CRNKL1-202ENST00000377340 PLAC4Q8WY50 150 aa4.43□□□□□ -1.7
CRNKL1-202ENST00000377340 MT1HL1P0DM35 61 aa4.42□□□□□ -1.7
CRNKL1-202ENST00000377340 PLECQ15149 4684 aaKnown RBP4.41□□□□□ -1.7
CRNKL1-202ENST00000377340 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
CRNKL1-202ENST00000377340 DNAH5Q8TE73 4624 aa4.39□□□□□ -1.71
CRNKL1-202ENST00000377340 KRTAP10-10P60014 251 aa4.38□□□□□ -1.71
CRNKL1-202ENST00000377340 KRTAP10-4P60372 401 aaPredicted RBP4.36□□□□□ -1.71
CRNKL1-202ENST00000377340 KIAA1109Q2LD37 5005 aa4.35□□□□□ -1.71
CRNKL1-202ENST00000377340 DNAH11Q96DT5 4516 aa4.35□□□□□ -1.71
CRNKL1-202ENST00000377340 STARD9Q9P2P6 4700 aa4.33□□□□□ -1.72
CRNKL1-202ENST00000377340 RYR1P21817 5038 aa4.33□□□□□ -1.72
CRNKL1-202ENST00000377340 FAT1Q14517 4588 aa4.32□□□□□ -1.72
CRNKL1-202ENST00000377340 DNAH1Q9P2D7 4330 aa4.29□□□□□ -1.72
CRNKL1-202ENST00000377340 ANK2Q01484 3957 aa4.27□□□□□ -1.73
CRNKL1-202ENST00000377340 RYR3Q15413 4870 aa4.25□□□□□ -1.73
CRNKL1-202ENST00000377340 DYNC1H1Q14204 4646 aaKnown RBP4.24□□□□□ -1.73
CRNKL1-202ENST00000377340 LYSTQ99698 3801 aa4.24□□□□□ -1.73
CRNKL1-202ENST00000377340 HYDINQ4G0P3 5121 aa4.23□□□□□ -1.73
CRNKL1-202ENST00000377340 DNAH10Q8IVF4 4471 aa4.22□□□□□ -1.73
CRNKL1-202ENST00000377340 LRP1BQ9NZR2 4599 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms