RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 FP248Q71RG6 208 aaPredicted RBP6.63□□□□□ -1.35
HDAC6-203ENST00000376619 SSBP3-AS1Q7Z2R9 100 aa6.63□□□□□ -1.35
HDAC6-203ENST00000376619 LINC00304Q8N9R0 145 aa6.62□□□□□ -1.35
HDAC6-203ENST00000376619 PRKDCP78527 4128 aaKnown RBP6.6□□□□□ -1.35
HDAC6-203ENST00000376619 C1orf195Q5TG92 126 aa6.6□□□□□ -1.35
HDAC6-203ENST00000376619 Q5XG85 94 aa6.58□□□□□ -1.36
HDAC6-203ENST00000376619 FAM229AH3BQW9 127 aa6.58□□□□□ -1.36
HDAC6-203ENST00000376619 SPRR1BP22528 89 aa6.58□□□□□ -1.36
HDAC6-203ENST00000376619 CD164Q04900 197 aa6.56□□□□□ -1.36
HDAC6-203ENST00000376619 PRO0628Q9UI54 55 aa6.56□□□□□ -1.36
HDAC6-203ENST00000376619 ACYP2P14621 99 aa6.55□□□□□ -1.36
HDAC6-203ENST00000376619 A0A1B0GU69 56 aa6.53□□□□□ -1.36
HDAC6-203ENST00000376619 LOC101927531A0A1B0GV80 90 aa6.53□□□□□ -1.36
HDAC6-203ENST00000376619 Q5W150 140 aa6.53□□□□□ -1.36
HDAC6-203ENST00000376619 H3BPC8 53 aa6.52□□□□□ -1.37
HDAC6-203ENST00000376619 KRTAP29-1A8MX34 341 aaPredicted RBP6.5□□□□□ -1.37
HDAC6-203ENST00000376619 DNAH10Q8IVF4 4471 aa6.5□□□□□ -1.37
HDAC6-203ENST00000376619 HRES1P13985 223 aa6.5□□□□□ -1.37
HDAC6-203ENST00000376619 HUWE1Q7Z6Z7 4374 aaKnown RBP6.5□□□□□ -1.37
HDAC6-203ENST00000376619 KRTAP13-1Q8IUC0 172 aa6.49□□□□□ -1.37
HDAC6-203ENST00000376619 C8orf87E5RJ46 101 aa6.49□□□□□ -1.37
HDAC6-203ENST00000376619 KRTAP13-2Q52LG2 175 aa6.47□□□□□ -1.37
HDAC6-203ENST00000376619 DNAH9Q9NYC9 4486 aa6.45□□□□□ -1.38
HDAC6-203ENST00000376619 A8MU10 97 aa6.44□□□□□ -1.38
HDAC6-203ENST00000376619 H3BS24 57 aa6.44□□□□□ -1.38
HDAC6-203ENST00000376619 LINC00483Q53H64 154 aa6.44□□□□□ -1.38
HDAC6-203ENST00000376619 ATP11AUNQ6ZP68 121 aa6.44□□□□□ -1.38
HDAC6-203ENST00000376619 CYP4F30PQ9H0H9 118 aa6.44□□□□□ -1.38
HDAC6-203ENST00000376619 LYSTQ99698 3801 aa6.43□□□□□ -1.38
HDAC6-203ENST00000376619 IGLV7-46A0A075B6I9 117 aa6.42□□□□□ -1.38
HDAC6-203ENST00000376619 ZCCHC13Q8WW36 166 aaKnown RBP6.4□□□□□ -1.39
HDAC6-203ENST00000376619 SPANXA2-OT1Q8N9U9 137 aa6.39□□□□□ -1.39
HDAC6-203ENST00000376619 PLECQ15149 4684 aaKnown RBP6.37□□□□□ -1.39
HDAC6-203ENST00000376619 CMYA5Q8N3K9 4069 aa6.37□□□□□ -1.39
HDAC6-203ENST00000376619 SPINK7P58062 85 aa6.35□□□□□ -1.39
HDAC6-203ENST00000376619 Q5VV11 94 aa6.34□□□□□ -1.4
HDAC6-203ENST00000376619 Q5VSD8 79 aa6.33□□□□□ -1.4
HDAC6-203ENST00000376619 J3QL48 77 aa6.33□□□□□ -1.4
HDAC6-203ENST00000376619 Q1T7F1 81 aa6.33□□□□□ -1.4
HDAC6-203ENST00000376619 A0A0D9SG42 100 aa6.32□□□□□ -1.4
HDAC6-203ENST00000376619 UQCR11O14957 56 aa6.27□□□□□ -1.41
HDAC6-203ENST00000376619 MIR22HGQ0VDD5 57 aa6.27□□□□□ -1.41
HDAC6-203ENST00000376619 STARD9Q9P2P6 4700 aa6.27□□□□□ -1.41
HDAC6-203ENST00000376619 K7ERS5 55 aa6.27□□□□□ -1.41
HDAC6-203ENST00000376619 KRTAP1-4P0C5Y4 121 aa6.25□□□□□ -1.41
HDAC6-203ENST00000376619 DNAH11Q96DT5 4516 aa6.25□□□□□ -1.41
HDAC6-203ENST00000376619 LINC01554Q52M75 96 aa6.25□□□□□ -1.41
HDAC6-203ENST00000376619 A0A0A0MQY5 61 aa6.24□□□□□ -1.41
HDAC6-203ENST00000376619 KMT2AQ03164 3969 aa6.23□□□□□ -1.41
HDAC6-203ENST00000376619 CRIPTQ9P021 101 aa6.22□□□□□ -1.41
HDAC6-203ENST00000376619 KMT2CQ8NEZ4 4911 aaKnown RBP6.22□□□□□ -1.41
HDAC6-203ENST00000376619 DNAH3Q8TD57 4116 aa6.21□□□□□ -1.41
HDAC6-203ENST00000376619 PRAC1Q96KF2 57 aa6.21□□□□□ -1.41
HDAC6-203ENST00000376619 Q6ZSA8 131 aa6.21□□□□□ -1.42
HDAC6-203ENST00000376619 LCA10Q71F78 164 aa6.2□□□□□ -1.42
HDAC6-203ENST00000376619 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
HDAC6-203ENST00000376619 CDC42SE1Q9NRR8 79 aa6.17□□□□□ -1.42
HDAC6-203ENST00000376619 A0A1B0GVY2 172 aa6.17□□□□□ -1.42
HDAC6-203ENST00000376619 Q75L30 129 aa6.16□□□□□ -1.42
HDAC6-203ENST00000376619 DNAH7Q8WXX0 4024 aa6.15□□□□□ -1.42
HDAC6-203ENST00000376619 DMAC1Q96GE9 116 aa6.15□□□□□ -1.42
HDAC6-203ENST00000376619 DNAH1Q9P2D7 4330 aa6.15□□□□□ -1.42
HDAC6-203ENST00000376619 COX6B2Q6YFQ2 88 aa6.14□□□□□ -1.43
HDAC6-203ENST00000376619 SPATA8Q6RVD6 105 aa6.14□□□□□ -1.43
HDAC6-203ENST00000376619 FAT1Q14517 4588 aa6.13□□□□□ -1.43
HDAC6-203ENST00000376619 SPINT4Q6UDR6 99 aa6.12□□□□□ -1.43
HDAC6-203ENST00000376619 A0A1B0GU33 70 aa6.1□□□□□ -1.43
HDAC6-203ENST00000376619 DNAH8Q96JB1 4490 aa6.1□□□□□ -1.43
HDAC6-203ENST00000376619 ASB16-AS1Q495Z4 193 aa6.07□□□□□ -1.44
HDAC6-203ENST00000376619 KTN1-AS1Q86SY8 53 aa6.06□□□□□ -1.44
HDAC6-203ENST00000376619 DNAH5Q8TE73 4624 aa6.05□□□□□ -1.44
HDAC6-203ENST00000376619 ADM2Q7Z4H4 148 aa6.05□□□□□ -1.44
HDAC6-203ENST00000376619 LRP1BQ9NZR2 4599 aa6.04□□□□□ -1.44
HDAC6-203ENST00000376619 FRAS1Q86XX4 4008 aa6.03□□□□□ -1.44
HDAC6-203ENST00000376619 HYDINQ4G0P3 5121 aa6.03□□□□□ -1.44
HDAC6-203ENST00000376619 KIAA1109Q2LD37 5005 aa6.03□□□□□ -1.44
HDAC6-203ENST00000376619 SACSQ9NZJ4 4579 aa6.02□□□□□ -1.45
HDAC6-203ENST00000376619 RBM12B-AS1Q9P1G2 102 aa6.02□□□□□ -1.45
HDAC6-203ENST00000376619 MYCBP2O75592 4640 aa6.01□□□□□ -1.45
HDAC6-203ENST00000376619 KRTAP16-1A8MUX0 517 aa6.01□□□□□ -1.45
HDAC6-203ENST00000376619 KRTAP4-5Q9BYR2 181 aa6□□□□□ -1.45
HDAC6-203ENST00000376619 RYR2Q92736 4967 aa6□□□□□ -1.45
HDAC6-203ENST00000376619 RYR3Q15413 4870 aa6□□□□□ -1.45
HDAC6-203ENST00000376619 VPS13DQ5THJ4 4388 aa5.99□□□□□ -1.45
HDAC6-203ENST00000376619 DNAH6Q9C0G6 4158 aa5.98□□□□□ -1.45
HDAC6-203ENST00000376619 ALMS1Q8TCU4 4167 aa5.97□□□□□ -1.45
HDAC6-203ENST00000376619 S4R3F8 94 aa5.97□□□□□ -1.45
HDAC6-203ENST00000376619 CSAG1Q6PB30 78 aa5.96□□□□□ -1.46
HDAC6-203ENST00000376619 KRTAP13-3Q3SY46 172 aa5.92□□□□□ -1.46
HDAC6-203ENST00000376619 DNAH17Q9UFH2 4485 aa5.92□□□□□ -1.46
HDAC6-203ENST00000376619 A8MUU9 505 aa5.91□□□□□ -1.46
HDAC6-203ENST00000376619 DNAH2Q9P225 4427 aa5.9□□□□□ -1.46
HDAC6-203ENST00000376619 EPPK1P58107 5090 aaKnown RBP5.9□□□□□ -1.46
HDAC6-203ENST00000376619 FAT3Q8TDW7 4589 aa5.9□□□□□ -1.47
HDAC6-203ENST00000376619 C20orf166-AS1Q96NR2 134 aa5.89□□□□□ -1.47
HDAC6-203ENST00000376619 H1FX-AS1Q4G0G2 97 aa5.88□□□□□ -1.47
HDAC6-203ENST00000376619 XP32Q5T750 250 aa5.88□□□□□ -1.47
HDAC6-203ENST00000376619 DYNC1H1Q14204 4646 aaKnown RBP5.87□□□□□ -1.47
HDAC6-203ENST00000376619 DYNC2H1Q8NCM8 4307 aaKnown RBP5.86□□□□□ -1.47
HDAC6-203ENST00000376619 PKHD1P08F94 4074 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms