RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 Q96NJ1 140 aa7.02□□□□□ -1.28
MCF2L-202ENST00000375597 WWC2-AS2Q96NR7 200 aa7.02□□□□□ -1.29
MCF2L-202ENST00000375597 LOC101927531A0A1B0GV80 90 aa7.01□□□□□ -1.29
MCF2L-202ENST00000375597 IGLV7-46A0A075B6I9 117 aa7□□□□□ -1.29
MCF2L-202ENST00000375597 KMT2AQ03164 3969 aa7□□□□□ -1.29
MCF2L-202ENST00000375597 ZNF861PO60384 105 aa7□□□□□ -1.29
MCF2L-202ENST00000375597 NUPR2A6NF83 97 aa6.99□□□□□ -1.29
MCF2L-202ENST00000375597 PRAC1Q96KF2 57 aa6.99□□□□□ -1.29
MCF2L-202ENST00000375597 DNAH3Q8TD57 4116 aa6.99□□□□□ -1.29
MCF2L-202ENST00000375597 SPRR1BP22528 89 aa6.99□□□□□ -1.29
MCF2L-202ENST00000375597 SPANXA2-OT1Q8N9U9 137 aa6.99□□□□□ -1.29
MCF2L-202ENST00000375597 ZNF706Q9Y5V0 76 aaPredicted RBP6.98□□□□□ -1.29
MCF2L-202ENST00000375597 STARD9Q9P2P6 4700 aa6.97□□□□□ -1.29
MCF2L-202ENST00000375597 DNAH1Q9P2D7 4330 aa6.97□□□□□ -1.29
MCF2L-202ENST00000375597 H3BPC8 53 aa6.97□□□□□ -1.29
MCF2L-202ENST00000375597 Q6ZRN7 208 aaPredicted RBP6.97□□□□□ -1.29
MCF2L-202ENST00000375597 TP53AIP1Q9HCN2 124 aa6.97□□□□□ -1.29
MCF2L-202ENST00000375597 C1orf134Q5TEV5 83 aa6.96□□□□□ -1.3
MCF2L-202ENST00000375597 KRTAP13-1Q8IUC0 172 aa6.95□□□□□ -1.3
MCF2L-202ENST00000375597 KRTAP10-2P60368 255 aa6.93□□□□□ -1.3
MCF2L-202ENST00000375597 LINC00313P59037 77 aa6.92□□□□□ -1.3
MCF2L-202ENST00000375597 ADM2Q7Z4H4 148 aa6.92□□□□□ -1.3
MCF2L-202ENST00000375597 Q8N1X5 172 aa6.92□□□□□ -1.3
MCF2L-202ENST00000375597 IGLV7-43P04211 117 aa6.91□□□□□ -1.3
MCF2L-202ENST00000375597 PRKDCP78527 4128 aaKnown RBP6.91□□□□□ -1.3
MCF2L-202ENST00000375597 Q75L30 129 aa6.9□□□□□ -1.3
MCF2L-202ENST00000375597 RBM12B-AS1Q9P1G2 102 aa6.9□□□□□ -1.3
MCF2L-202ENST00000375597 A0A1B0GU69 56 aa6.89□□□□□ -1.31
MCF2L-202ENST00000375597 Q6ZR54 194 aa6.89□□□□□ -1.31
MCF2L-202ENST00000375597 DNAH8Q96JB1 4490 aa6.88□□□□□ -1.31
MCF2L-202ENST00000375597 KTN1-AS1Q86SY8 53 aa6.88□□□□□ -1.31
MCF2L-202ENST00000375597 SMR3BP02814 79 aaPredicted RBP6.88□□□□□ -1.31
MCF2L-202ENST00000375597 DNAH11Q96DT5 4516 aa6.88□□□□□ -1.31
MCF2L-202ENST00000375597 ATP11AUNQ6ZP68 121 aa6.87□□□□□ -1.31
MCF2L-202ENST00000375597 C7orf65Q6ZTY9 151 aa6.87□□□□□ -1.31
MCF2L-202ENST00000375597 C4orf48Q5BLP8 95 aa6.87□□□□□ -1.31
MCF2L-202ENST00000375597 CDC42SE1Q9NRR8 79 aa6.87□□□□□ -1.31
MCF2L-202ENST00000375597 DNHD1Q96M86 4753 aa6.87□□□□□ -1.31
MCF2L-202ENST00000375597 ACYP2P14621 99 aa6.86□□□□□ -1.31
MCF2L-202ENST00000375597 DNAH17Q9UFH2 4485 aa6.85□□□□□ -1.31
MCF2L-202ENST00000375597 C9orf92A6NGG3 77 aa6.85□□□□□ -1.31
MCF2L-202ENST00000375597 DNAH6Q9C0G6 4158 aa6.84□□□□□ -1.31
MCF2L-202ENST00000375597 LINC01558Q9Y6Z2 57 aa6.84□□□□□ -1.31
MCF2L-202ENST00000375597 LINC00483Q53H64 154 aa6.82□□□□□ -1.32
MCF2L-202ENST00000375597 PLAC8Q9NZF1 115 aa6.82□□□□□ -1.32
MCF2L-202ENST00000375597 PLA2G1BP04054 148 aaKnown RBP6.81□□□□□ -1.32
MCF2L-202ENST00000375597 DNAH2Q9P225 4427 aa6.79□□□□□ -1.32
MCF2L-202ENST00000375597 KRTAP10-1P60331 282 aa6.78□□□□□ -1.32
MCF2L-202ENST00000375597 A6NN06 94 aa6.78□□□□□ -1.32
MCF2L-202ENST00000375597 VPS13DQ5THJ4 4388 aa6.78□□□□□ -1.32
MCF2L-202ENST00000375597 KRTAP13-2Q52LG2 175 aa6.77□□□□□ -1.33
MCF2L-202ENST00000375597 TYMSOSQ8TAI1 123 aa6.76□□□□□ -1.33
MCF2L-202ENST00000375597 FAM229AH3BQW9 127 aa6.76□□□□□ -1.33
MCF2L-202ENST00000375597 CRIPTQ9P021 101 aa6.74□□□□□ -1.33
MCF2L-202ENST00000375597 HECTD4Q9Y4D8 3996 aa6.74□□□□□ -1.33
MCF2L-202ENST00000375597 LRP1BQ9NZR2 4599 aa6.74□□□□□ -1.33
MCF2L-202ENST00000375597 ASB16-AS1Q495Z4 193 aa6.74□□□□□ -1.33
MCF2L-202ENST00000375597 MIR22HGQ0VDD5 57 aa6.73□□□□□ -1.33
MCF2L-202ENST00000375597 SSBP3-AS1Q7Z2R9 100 aa6.7□□□□□ -1.34
MCF2L-202ENST00000375597 DYNC2H1Q8NCM8 4307 aaKnown RBP6.69□□□□□ -1.34
MCF2L-202ENST00000375597 C8orf87E5RJ46 101 aa6.68□□□□□ -1.34
MCF2L-202ENST00000375597 UQCR11O14957 56 aa6.67□□□□□ -1.34
MCF2L-202ENST00000375597 DMAC1Q96GE9 116 aa6.67□□□□□ -1.34
MCF2L-202ENST00000375597 KRTAP13-3Q3SY46 172 aa6.63□□□□□ -1.35
MCF2L-202ENST00000375597 CSAG1Q6PB30 78 aa6.63□□□□□ -1.35
MCF2L-202ENST00000375597 FAT1Q14517 4588 aa6.61□□□□□ -1.35
MCF2L-202ENST00000375597 HYDINQ4G0P3 5121 aa6.6□□□□□ -1.35
MCF2L-202ENST00000375597 LINC00304Q8N9R0 145 aa6.59□□□□□ -1.36
MCF2L-202ENST00000375597 VPS13BQ7Z7G8 4022 aa6.58□□□□□ -1.36
MCF2L-202ENST00000375597 H3BS24 57 aa6.57□□□□□ -1.36
MCF2L-202ENST00000375597 SPATA8Q6RVD6 105 aa6.57□□□□□ -1.36
MCF2L-202ENST00000375597 DNAH5Q8TE73 4624 aa6.57□□□□□ -1.36
MCF2L-202ENST00000375597 PKHD1P08F94 4074 aa6.55□□□□□ -1.36
MCF2L-202ENST00000375597 KRTAP1-4P0C5Y4 121 aa6.55□□□□□ -1.36
MCF2L-202ENST00000375597 FAT2Q9NYQ8 4349 aa6.55□□□□□ -1.36
MCF2L-202ENST00000375597 ALMS1Q8TCU4 4167 aa6.55□□□□□ -1.36
MCF2L-202ENST00000375597 A0A0D9SG42 100 aa6.54□□□□□ -1.36
MCF2L-202ENST00000375597 KRTAP16-1A8MUX0 517 aa6.53□□□□□ -1.36
MCF2L-202ENST00000375597 MYCBP2O75592 4640 aa6.52□□□□□ -1.37
MCF2L-202ENST00000375597 LINC01554Q52M75 96 aa6.5□□□□□ -1.37
MCF2L-202ENST00000375597 KRTAP21-3Q3LHN1 58 aa6.43□□□□□ -1.38
MCF2L-202ENST00000375597 A0A1B0GU33 70 aa6.43□□□□□ -1.38
MCF2L-202ENST00000375597 Q6ZSA8 131 aa6.42□□□□□ -1.38
MCF2L-202ENST00000375597 H0YAA0 97 aa6.41□□□□□ -1.38
MCF2L-202ENST00000375597 LRP1Q07954 4544 aaKnown RBP6.35□□□□□ -1.39
MCF2L-202ENST00000375597 DYNC1H1Q14204 4646 aaKnown RBP6.33□□□□□ -1.4
MCF2L-202ENST00000375597 KRTAP3-1Q9BYR8 98 aa6.32□□□□□ -1.4
MCF2L-202ENST00000375597 K7ERS5 55 aa6.32□□□□□ -1.4
MCF2L-202ENST00000375597 FAT3Q8TDW7 4589 aa6.31□□□□□ -1.4
MCF2L-202ENST00000375597 H1FX-AS1Q4G0G2 97 aa6.29□□□□□ -1.4
MCF2L-202ENST00000375597 PKD1P98161 4303 aa6.27□□□□□ -1.41
MCF2L-202ENST00000375597 COX6B2Q6YFQ2 88 aa6.26□□□□□ -1.41
MCF2L-202ENST00000375597 SPINT4Q6UDR6 99 aa6.24□□□□□ -1.41
MCF2L-202ENST00000375597 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
MCF2L-202ENST00000375597 SACSQ9NZJ4 4579 aa6.24□□□□□ -1.41
MCF2L-202ENST00000375597 A8MUU9 505 aa6.22□□□□□ -1.41
MCF2L-202ENST00000375597 APOBP04114 4563 aaKnown RBP6.19□□□□□ -1.42
MCF2L-202ENST00000375597 KRTAP25-1Q3LHN0 102 aa6.19□□□□□ -1.42
MCF2L-202ENST00000375597 KMT2CQ8NEZ4 4911 aaKnown RBP6.18□□□□□ -1.42
MCF2L-202ENST00000375597 C20orf166-AS1Q96NR2 134 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms