RNA–Protein interactions for RNA: ENST00000372616.1

CTPS1-201, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTPS1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-201ENST00000372616 C16orf90A8MZG2 172 aa4.48□□□□□ -1.69
CTPS1-201ENST00000372616 LINC00472Q9H8W2 130 aa4.47□□□□□ -1.69
CTPS1-201ENST00000372616 PRKDCP78527 4128 aaKnown RBP4.47□□□□□ -1.69
CTPS1-201ENST00000372616 RPL37AP61513 92 aaKnown RBP4.46□□□□□ -1.69
CTPS1-201ENST00000372616 LINC01558Q9Y6Z2 57 aa4.46□□□□□ -1.69
CTPS1-201ENST00000372616 IGKV2-30P06310 120 aa4.46□□□□□ -1.7
CTPS1-201ENST00000372616 CNBPP62633 177 aaKnown RBP4.46□□□□□ -1.7
CTPS1-201ENST00000372616 SPTSSBQ8NFR3 76 aa4.46□□□□□ -1.7
CTPS1-201ENST00000372616 C14orf177Q52M58 125 aa4.45□□□□□ -1.7
CTPS1-201ENST00000372616 KRTAP7-1Q8IUC3 87 aa4.45□□□□□ -1.7
CTPS1-201ENST00000372616 C7orf65Q6ZTY9 151 aa4.45□□□□□ -1.7
CTPS1-201ENST00000372616 DEFB116Q30KQ4 102 aa4.44□□□□□ -1.7
CTPS1-201ENST00000372616 KMT2CQ8NEZ4 4911 aaKnown RBP4.43□□□□□ -1.7
CTPS1-201ENST00000372616 A6NN06 94 aa4.43□□□□□ -1.7
CTPS1-201ENST00000372616 Q6ZR54 194 aa4.43□□□□□ -1.7
CTPS1-201ENST00000372616 MMP24-AS1A0A0U1RRL7 71 aa4.43□□□□□ -1.7
CTPS1-201ENST00000372616 PRLHP81277 87 aa4.42□□□□□ -1.7
CTPS1-201ENST00000372616 LCA10Q71F78 164 aa4.42□□□□□ -1.7
CTPS1-201ENST00000372616 PLAC8Q9NZF1 115 aa4.42□□□□□ -1.7
CTPS1-201ENST00000372616 RBM12B-AS1Q9P1G2 102 aa4.42□□□□□ -1.7
CTPS1-201ENST00000372616 ASB16-AS1Q495Z4 193 aa4.41□□□□□ -1.7
CTPS1-201ENST00000372616 RYR3Q15413 4870 aa4.41□□□□□ -1.7
CTPS1-201ENST00000372616 NBDYA0A0U1RRE5 68 aa4.41□□□□□ -1.7
CTPS1-201ENST00000372616 A0A087X002 238 aa4.4□□□□□ -1.7
CTPS1-201ENST00000372616 DYNC2H1Q8NCM8 4307 aaKnown RBP4.4□□□□□ -1.71
CTPS1-201ENST00000372616 KRTAP17-1Q9BYP8 105 aa4.39□□□□□ -1.71
CTPS1-201ENST00000372616 A0A096LNI7 61 aa4.39□□□□□ -1.71
CTPS1-201ENST00000372616 CASC10Q5T4H9 136 aa4.39□□□□□ -1.71
CTPS1-201ENST00000372616 IGKV2-24A0A0C4DH68 120 aa4.38□□□□□ -1.71
CTPS1-201ENST00000372616 C8orf17Q9NRJ1 99 aa4.38□□□□□ -1.71
CTPS1-201ENST00000372616 ZNF706Q9Y5V0 76 aaPredicted RBP4.38□□□□□ -1.71
CTPS1-201ENST00000372616 SPAG11AQ6PDA7 123 aa4.38□□□□□ -1.71
CTPS1-201ENST00000372616 KRTAP1-5Q9BYS1 174 aa4.38□□□□□ -1.71
CTPS1-201ENST00000372616 DNAH7Q8WXX0 4024 aa4.38□□□□□ -1.71
CTPS1-201ENST00000372616 A0A0G2JQZ4 141 aa4.36□□□□□ -1.71
CTPS1-201ENST00000372616 A0A1B0GVX0 72 aa4.36□□□□□ -1.71
CTPS1-201ENST00000372616 A0A1W2PNN7 141 aa4.36□□□□□ -1.71
CTPS1-201ENST00000372616 MRPL34Q9BQ48 92 aaKnown RBP4.36□□□□□ -1.71
CTPS1-201ENST00000372616 TENM2Q9NT68 2774 aa4.36□□□□□ -1.71
CTPS1-201ENST00000372616 CSMD3Q7Z407 3707 aa4.36□□□□□ -1.71
CTPS1-201ENST00000372616 PCOTHQ58A44 107 aa4.36□□□□□ -1.71
CTPS1-201ENST00000372616 A8MU10 97 aa4.35□□□□□ -1.71
CTPS1-201ENST00000372616 LY6G6CO95867 125 aa4.35□□□□□ -1.71
CTPS1-201ENST00000372616 ACYP2P14621 99 aa4.35□□□□□ -1.71
CTPS1-201ENST00000372616 HRES1P13985 223 aa4.34□□□□□ -1.71
CTPS1-201ENST00000372616 KRTAP9-3Q9BYQ3 159 aa4.34□□□□□ -1.71
CTPS1-201ENST00000372616 LINC00483Q53H64 154 aa4.33□□□□□ -1.72
CTPS1-201ENST00000372616 C1orf134Q5TEV5 83 aa4.33□□□□□ -1.72
CTPS1-201ENST00000372616 Q6ZRN7 208 aaPredicted RBP4.33□□□□□ -1.72
CTPS1-201ENST00000372616 Q96NJ1 140 aa4.33□□□□□ -1.72
CTPS1-201ENST00000372616 NOTCH2NLQ7Z3S9 236 aa4.33□□□□□ -1.72
CTPS1-201ENST00000372616 KRTAP13-1Q8IUC0 172 aa4.32□□□□□ -1.72
CTPS1-201ENST00000372616 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
CTPS1-201ENST00000372616 BIRC6Q9NR09 4857 aa4.32□□□□□ -1.72
CTPS1-201ENST00000372616 IGHV6-1A0A0B4J1U7 121 aa4.31□□□□□ -1.72
CTPS1-201ENST00000372616 C8orf87E5RJ46 101 aa4.31□□□□□ -1.72
CTPS1-201ENST00000372616 SPINK7P58062 85 aa4.3□□□□□ -1.72
CTPS1-201ENST00000372616 PLECQ15149 4684 aaKnown RBP4.3□□□□□ -1.72
CTPS1-201ENST00000372616 STARD9Q9P2P6 4700 aa4.3□□□□□ -1.72
CTPS1-201ENST00000372616 VPS13DQ5THJ4 4388 aa4.3□□□□□ -1.72
CTPS1-201ENST00000372616 A0A087WTM6 91 aa4.29□□□□□ -1.72
CTPS1-201ENST00000372616 IGKV2D-30A0A075B6S6 120 aa4.29□□□□□ -1.72
CTPS1-201ENST00000372616 KRTAP4-5Q9BYR2 181 aa4.29□□□□□ -1.72
CTPS1-201ENST00000372616 DNAH1Q9P2D7 4330 aa4.29□□□□□ -1.72
CTPS1-201ENST00000372616 EPPK1P58107 5090 aaKnown RBP4.28□□□□□ -1.72
CTPS1-201ENST00000372616 LYSTQ99698 3801 aa4.28□□□□□ -1.73
CTPS1-201ENST00000372616 A0A1B0GU69 56 aa4.27□□□□□ -1.73
CTPS1-201ENST00000372616 DMAC1Q96GE9 116 aa4.27□□□□□ -1.73
CTPS1-201ENST00000372616 ALMS1Q8TCU4 4167 aa4.26□□□□□ -1.73
CTPS1-201ENST00000372616 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
CTPS1-201ENST00000372616 CHTF8P0CG12 524 aa4.25□□□□□ -1.73
CTPS1-201ENST00000372616 LINC00313P59037 77 aa4.25□□□□□ -1.73
CTPS1-201ENST00000372616 SPATA8Q6RVD6 105 aa4.25□□□□□ -1.73
CTPS1-201ENST00000372616 DNAH6Q9C0G6 4158 aa4.25□□□□□ -1.73
CTPS1-201ENST00000372616 UQCR11O14957 56 aa4.24□□□□□ -1.73
CTPS1-201ENST00000372616 RTL8CO15255 209 aa4.24□□□□□ -1.73
CTPS1-201ENST00000372616 KRTAP11-1Q8IUC1 163 aa4.24□□□□□ -1.73
CTPS1-201ENST00000372616 SPACA4Q8TDM5 124 aa4.24□□□□□ -1.73
CTPS1-201ENST00000372616 KRTAP13-3Q3SY46 172 aa4.23□□□□□ -1.73
CTPS1-201ENST00000372616 LINC01554Q52M75 96 aa4.22□□□□□ -1.73
CTPS1-201ENST00000372616 ZNF861PO60384 105 aa4.22□□□□□ -1.73
CTPS1-201ENST00000372616 RETNLBQ9BQ08 111 aa4.22□□□□□ -1.73
CTPS1-201ENST00000372616 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
CTPS1-201ENST00000372616 KRTAP5-3Q6L8H2 238 aa4.21□□□□□ -1.74
CTPS1-201ENST00000372616 SSBP3-AS1Q7Z2R9 100 aa4.21□□□□□ -1.74
CTPS1-201ENST00000372616 RYR2Q92736 4967 aa4.19□□□□□ -1.74
CTPS1-201ENST00000372616 DNAH10Q8IVF4 4471 aa4.19□□□□□ -1.74
CTPS1-201ENST00000372616 KMT2AQ03164 3969 aa4.19□□□□□ -1.74
CTPS1-201ENST00000372616 Q5W150 140 aa4.18□□□□□ -1.74
CTPS1-201ENST00000372616 PSORS1C2Q9UIG4 136 aa4.17□□□□□ -1.74
CTPS1-201ENST00000372616 SPINK6Q6UWN8 80 aa4.16□□□□□ -1.74
CTPS1-201ENST00000372616 DNAH2Q9P225 4427 aa4.16□□□□□ -1.74
CTPS1-201ENST00000372616 DNAH17Q9UFH2 4485 aa4.15□□□□□ -1.74
CTPS1-201ENST00000372616 PANO1I0J062 215 aa4.15□□□□□ -1.75
CTPS1-201ENST00000372616 HYDINQ4G0P3 5121 aa4.15□□□□□ -1.75
CTPS1-201ENST00000372616 PCLOQ9Y6V0 5065 aa4.14□□□□□ -1.75
CTPS1-201ENST00000372616 Q6ZSA8 131 aa4.14□□□□□ -1.75
CTPS1-201ENST00000372616 SACSQ9NZJ4 4579 aa4.14□□□□□ -1.75
CTPS1-201ENST00000372616 CIRBP-AS1Q8TBR5 109 aa4.13□□□□□ -1.75
CTPS1-201ENST00000372616 FRAS1Q86XX4 4008 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms