RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 APLNQ9ULZ1 77 aa11□□□□□ -0.65
MMP9-201ENST00000372330 DNAH7Q8WXX0 4024 aa11□□□□□ -0.65
MMP9-201ENST00000372330 RETNLBQ9BQ08 111 aa10.98□□□□□ -0.65
MMP9-201ENST00000372330 UQCR11O14957 56 aa10.96□□□□□ -0.66
MMP9-201ENST00000372330 MIR22HGQ0VDD5 57 aa10.96□□□□□ -0.66
MMP9-201ENST00000372330 C14orf177Q52M58 125 aa10.95□□□□□ -0.66
MMP9-201ENST00000372330 DYNC2H1Q8NCM8 4307 aaKnown RBP10.94□□□□□ -0.66
MMP9-201ENST00000372330 KRTAP11-1Q8IUC1 163 aa10.94□□□□□ -0.66
MMP9-201ENST00000372330 DMAC1Q96GE9 116 aa10.94□□□□□ -0.66
MMP9-201ENST00000372330 PLECQ15149 4684 aaKnown RBP10.92□□□□□ -0.66
MMP9-201ENST00000372330 KRTAP13-3Q3SY46 172 aa10.91□□□□□ -0.66
MMP9-201ENST00000372330 ALMS1Q8TCU4 4167 aa10.9□□□□□ -0.66
MMP9-201ENST00000372330 CHTF8P0CG12 524 aa10.89□□□□□ -0.67
MMP9-201ENST00000372330 CSAG1Q6PB30 78 aa10.88□□□□□ -0.67
MMP9-201ENST00000372330 SRRM2Q9UQ35 2752 aaKnown RBP10.88□□□□□ -0.67
MMP9-201ENST00000372330 Q5W150 140 aa10.87□□□□□ -0.67
MMP9-201ENST00000372330 IGLV9-49A0A0B4J1Y8 123 aa10.86□□□□□ -0.67
MMP9-201ENST00000372330 KRTAP13-1Q8IUC0 172 aa10.86□□□□□ -0.67
MMP9-201ENST00000372330 PRKDCP78527 4128 aaKnown RBP10.86□□□□□ -0.67
MMP9-201ENST00000372330 NBDYA0A0U1RRE5 68 aa10.85□□□□□ -0.67
MMP9-201ENST00000372330 NOTCH2NLQ7Z3S9 236 aa10.84□□□□□ -0.67
MMP9-201ENST00000372330 DNHD1Q96M86 4753 aa10.82□□□□□ -0.68
MMP9-201ENST00000372330 NUPR2A6NF83 97 aa10.81□□□□□ -0.68
MMP9-201ENST00000372330 LINC00483Q53H64 154 aa10.81□□□□□ -0.68
MMP9-201ENST00000372330 Q6ZRN7 208 aaPredicted RBP10.8□□□□□ -0.68
MMP9-201ENST00000372330 STARD9Q9P2P6 4700 aa10.8□□□□□ -0.68
MMP9-201ENST00000372330 PANO1I0J062 215 aa10.75□□□□□ -0.69
MMP9-201ENST00000372330 MEGF8Q7Z7M0 2845 aa10.75□□□□□ -0.69
MMP9-201ENST00000372330 ZNF706Q9Y5V0 76 aaPredicted RBP10.75□□□□□ -0.69
MMP9-201ENST00000372330 ZNF861PO60384 105 aa10.74□□□□□ -0.69
MMP9-201ENST00000372330 VPS13DQ5THJ4 4388 aa10.72□□□□□ -0.69
MMP9-201ENST00000372330 WWC2-AS2Q96NR7 200 aa10.7□□□□□ -0.7
MMP9-201ENST00000372330 FAM229AH3BQW9 127 aa10.69□□□□□ -0.7
MMP9-201ENST00000372330 SPACA4Q8TDM5 124 aa10.68□□□□□ -0.7
MMP9-201ENST00000372330 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.68□□□□□ -0.7
MMP9-201ENST00000372330 C1orf134Q5TEV5 83 aa10.65□□□□□ -0.7
MMP9-201ENST00000372330 A0A087WTM6 91 aa10.64□□□□□ -0.71
MMP9-201ENST00000372330 IGLV7-43P04211 117 aa10.64□□□□□ -0.71
MMP9-201ENST00000372330 IGKV2-30P06310 120 aa10.64□□□□□ -0.71
MMP9-201ENST00000372330 HECTD4Q9Y4D8 3996 aa10.62□□□□□ -0.71
MMP9-201ENST00000372330 SPINK6Q6UWN8 80 aa10.62□□□□□ -0.71
MMP9-201ENST00000372330 KMT2AQ03164 3969 aa10.61□□□□□ -0.71
MMP9-201ENST00000372330 DNAH2Q9P225 4427 aa10.59□□□□□ -0.71
MMP9-201ENST00000372330 FBN3Q75N90 2809 aa10.57□□□□□ -0.72
MMP9-201ENST00000372330 ROMO1P60602 79 aa10.56□□□□□ -0.72
MMP9-201ENST00000372330 KRTAP25-1Q3LHN0 102 aa10.56□□□□□ -0.72
MMP9-201ENST00000372330 DNAH17Q9UFH2 4485 aa10.53□□□□□ -0.72
MMP9-201ENST00000372330 TGP01266 2768 aa10.52□□□□□ -0.73
MMP9-201ENST00000372330 PSORS1C2Q9UIG4 136 aa10.52□□□□□ -0.73
MMP9-201ENST00000372330 IGLV5-52A0A0A0MRZ9 124 aa10.51□□□□□ -0.73
MMP9-201ENST00000372330 A8MUU9 505 aa10.49□□□□□ -0.73
MMP9-201ENST00000372330 FRAS1Q86XX4 4008 aa10.48□□□□□ -0.73
MMP9-201ENST00000372330 DNAH8Q96JB1 4490 aa10.47□□□□□ -0.73
MMP9-201ENST00000372330 ANAPC11Q9NYG5 84 aa10.47□□□□□ -0.73
MMP9-201ENST00000372330 LY6G6CO95867 125 aa10.45□□□□□ -0.74
MMP9-201ENST00000372330 IGKV2D-30A0A075B6S6 120 aa10.44□□□□□ -0.74
MMP9-201ENST00000372330 CIRBP-AS1Q8TBR5 109 aa10.4□□□□□ -0.74
MMP9-201ENST00000372330 SSBP3-AS1Q7Z2R9 100 aa10.4□□□□□ -0.74
MMP9-201ENST00000372330 KRTAP21-3Q3LHN1 58 aa10.39□□□□□ -0.75
MMP9-201ENST00000372330 LINC00304Q8N9R0 145 aa10.39□□□□□ -0.75
MMP9-201ENST00000372330 DNAH6Q9C0G6 4158 aa10.36□□□□□ -0.75
MMP9-201ENST00000372330 H0YAA0 97 aa10.33□□□□□ -0.76
MMP9-201ENST00000372330 Q6ZSA8 131 aa10.33□□□□□ -0.76
MMP9-201ENST00000372330 KRTAP16-1A8MUX0 517 aa10.32□□□□□ -0.76
MMP9-201ENST00000372330 DNAH5Q8TE73 4624 aa10.3□□□□□ -0.76
MMP9-201ENST00000372330 DNAH11Q96DT5 4516 aa10.3□□□□□ -0.76
MMP9-201ENST00000372330 SPINK1P00995 79 aa10.28□□□□□ -0.76
MMP9-201ENST00000372330 HYDINQ4G0P3 5121 aa10.28□□□□□ -0.76
MMP9-201ENST00000372330 KRTAP10-2P60368 255 aa10.24□□□□□ -0.77
MMP9-201ENST00000372330 A0A1B0GU33 70 aa10.22□□□□□ -0.77
MMP9-201ENST00000372330 PKD1P98161 4303 aa10.18□□□□□ -0.78
MMP9-201ENST00000372330 K7ERS5 55 aa10.18□□□□□ -0.78
MMP9-201ENST00000372330 P0C880 135 aa10.18□□□□□ -0.78
MMP9-201ENST00000372330 FAT2Q9NYQ8 4349 aa10.15□□□□□ -0.78
MMP9-201ENST00000372330 LRP1BQ9NZR2 4599 aa10.15□□□□□ -0.78
MMP9-201ENST00000372330 H1FX-AS1Q4G0G2 97 aa10.15□□□□□ -0.79
MMP9-201ENST00000372330 Q8N1X5 172 aa10.14□□□□□ -0.79
MMP9-201ENST00000372330 KRTAP10-1P60331 282 aa10.11□□□□□ -0.79
MMP9-201ENST00000372330 TYMSOSQ8TAI1 123 aa10.1□□□□□ -0.79
MMP9-201ENST00000372330 KRTAP13-2Q52LG2 175 aa10.07□□□□□ -0.8
MMP9-201ENST00000372330 SACSQ9NZJ4 4579 aa10.03□□□□□ -0.8
MMP9-201ENST00000372330 CRIPTQ9P021 101 aa10.01□□□□□ -0.81
MMP9-201ENST00000372330 KRTAP1-4P0C5Y4 121 aa9.99□□□□□ -0.81
MMP9-201ENST00000372330 VPS13BQ7Z7G8 4022 aa9.99□□□□□ -0.81
MMP9-201ENST00000372330 FLG2Q5D862 2391 aaPredicted RBP9.95□□□□□ -0.82
MMP9-201ENST00000372330 PKHD1P08F94 4074 aa9.94□□□□□ -0.82
MMP9-201ENST00000372330 SPINT4Q6UDR6 99 aa9.93□□□□□ -0.82
MMP9-201ENST00000372330 COX6B2Q6YFQ2 88 aa9.88□□□□□ -0.83
MMP9-201ENST00000372330 KRTAP3-1Q9BYR8 98 aa9.84□□□□□ -0.83
MMP9-201ENST00000372330 C20orf166-AS1Q96NR2 134 aa9.83□□□□□ -0.84
MMP9-201ENST00000372330 RPL37P61927 97 aaKnown RBP9.82□□□□□ -0.84
MMP9-201ENST00000372330 DYNC1H1Q14204 4646 aaKnown RBP9.79□□□□□ -0.84
MMP9-201ENST00000372330 KRTAP15-1Q3LI76 137 aa9.79□□□□□ -0.84
MMP9-201ENST00000372330 NDUFAF8A1L188 74 aa9.78□□□□□ -0.84
MMP9-201ENST00000372330 TPRXLQ17RH7 258 aa9.78□□□□□ -0.84
MMP9-201ENST00000372330 RYR2Q92736 4967 aa9.76□□□□□ -0.85
MMP9-201ENST00000372330 A0A1B0GVY2 172 aa9.75□□□□□ -0.85
MMP9-201ENST00000372330 KMT2CQ8NEZ4 4911 aaKnown RBP9.74□□□□□ -0.85
MMP9-201ENST00000372330 SMR3BP02814 79 aaPredicted RBP9.71□□□□□ -0.85
MMP9-201ENST00000372330 RPS29P62273 56 aaKnown RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms