RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
USP1-202ENST00000371146 FRAS1Q86XX4 4008 aa4.31□□□□□ -1.72
USP1-202ENST00000371146 PLAC8Q9NZF1 115 aa4.31□□□□□ -1.72
USP1-202ENST00000371146 DNAH5Q8TE73 4624 aa4.31□□□□□ -1.72
USP1-202ENST00000371146 CDK2AP2O75956 126 aa4.3□□□□□ -1.72
USP1-202ENST00000371146 IGLV1-50A0A075B6I6 118 aa4.29□□□□□ -1.72
USP1-202ENST00000371146 A0A1B0GW54 56 aa4.29□□□□□ -1.72
USP1-202ENST00000371146 RYR2Q92736 4967 aa4.29□□□□□ -1.72
USP1-202ENST00000371146 C9orf92A6NGG3 77 aa4.29□□□□□ -1.72
USP1-202ENST00000371146 H3BQ85 93 aa4.28□□□□□ -1.72
USP1-202ENST00000371146 SPANXA2-OT1Q8N9U9 137 aa4.28□□□□□ -1.72
USP1-202ENST00000371146 PKHD1P08F94 4074 aa4.27□□□□□ -1.73
USP1-202ENST00000371146 DNAH3Q8TD57 4116 aa4.27□□□□□ -1.73
USP1-202ENST00000371146 LINC00208Q96KT6 92 aa4.26□□□□□ -1.73
USP1-202ENST00000371146 IGKV4-1P06312 121 aa4.26□□□□□ -1.73
USP1-202ENST00000371146 Q8NBF4 154 aa4.26□□□□□ -1.73
USP1-202ENST00000371146 PLA2G2DQ9UNK4 145 aa4.26□□□□□ -1.73
USP1-202ENST00000371146 LINC00304Q8N9R0 145 aa4.26□□□□□ -1.73
USP1-202ENST00000371146 LINC01558Q9Y6Z2 57 aa4.26□□□□□ -1.73
USP1-202ENST00000371146 KRTAP7-1Q8IUC3 87 aa4.25□□□□□ -1.73
USP1-202ENST00000371146 VPS13DQ5THJ4 4388 aa4.25□□□□□ -1.73
USP1-202ENST00000371146 TLX1NBP0CAT3 122 aa4.24□□□□□ -1.73
USP1-202ENST00000371146 Q6ZRX8 168 aa4.24□□□□□ -1.73
USP1-202ENST00000371146 DYNC1H1Q14204 4646 aaKnown RBP4.24□□□□□ -1.73
USP1-202ENST00000371146 DHRS4-AS1Q9P1J3 65 aa4.23□□□□□ -1.73
USP1-202ENST00000371146 ADM2Q7Z4H4 148 aa4.23□□□□□ -1.73
USP1-202ENST00000371146 A0A087WSZ3 146 aa4.22□□□□□ -1.73
USP1-202ENST00000371146 ROMO1P60602 79 aa4.22□□□□□ -1.73
USP1-202ENST00000371146 HERC2O95714 4834 aa4.22□□□□□ -1.73
USP1-202ENST00000371146 LRP1BQ9NZR2 4599 aa4.21□□□□□ -1.73
USP1-202ENST00000371146 MYCBP2O75592 4640 aa4.21□□□□□ -1.74
USP1-202ENST00000371146 Q6ZSA8 131 aa4.21□□□□□ -1.74
USP1-202ENST00000371146 A0A1W2PNM2 257 aa4.2□□□□□ -1.74
USP1-202ENST00000371146 SPRR4Q96PI1 79 aa4.2□□□□□ -1.74
USP1-202ENST00000371146 KRTAP17-1Q9BYP8 105 aa4.2□□□□□ -1.74
USP1-202ENST00000371146 KCNQ1DNQ9H478 68 aa4.2□□□□□ -1.74
USP1-202ENST00000371146 FAT3Q8TDW7 4589 aa4.19□□□□□ -1.74
USP1-202ENST00000371146 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.19□□□□□ -1.74
USP1-202ENST00000371146 IGLV7-46A0A075B6I9 117 aa4.18□□□□□ -1.74
USP1-202ENST00000371146 IGLV6-57P01721 117 aa4.18□□□□□ -1.74
USP1-202ENST00000371146 LINC00575Q6W349 94 aa4.18□□□□□ -1.74
USP1-202ENST00000371146 BIRC6Q9NR09 4857 aa4.17□□□□□ -1.74
USP1-202ENST00000371146 H3BPC8 53 aa4.17□□□□□ -1.74
USP1-202ENST00000371146 SPINK7P58062 85 aa4.17□□□□□ -1.74
USP1-202ENST00000371146 DNAH6Q9C0G6 4158 aa4.17□□□□□ -1.74
USP1-202ENST00000371146 SMIM29Q86T20 159 aa4.16□□□□□ -1.74
USP1-202ENST00000371146 APOBP04114 4563 aaKnown RBP4.16□□□□□ -1.74
USP1-202ENST00000371146 SEC61BP60468 96 aaKnown RBP4.16□□□□□ -1.74
USP1-202ENST00000371146 CSAG1Q6PB30 78 aa4.16□□□□□ -1.74
USP1-202ENST00000371146 VPS13BQ7Z7G8 4022 aa4.16□□□□□ -1.74
USP1-202ENST00000371146 DNAH2Q9P225 4427 aa4.15□□□□□ -1.74
USP1-202ENST00000371146 KRTAP16-1A8MUX0 517 aa4.14□□□□□ -1.75
USP1-202ENST00000371146 Q8N377 158 aa4.14□□□□□ -1.75
USP1-202ENST00000371146 LRP1Q07954 4544 aaKnown RBP4.14□□□□□ -1.75
USP1-202ENST00000371146 COA5Q86WW8 74 aa4.14□□□□□ -1.75
USP1-202ENST00000371146 Q8N9L7 120 aa4.13□□□□□ -1.75
USP1-202ENST00000371146 SPAG11AQ6PDA7 123 aa4.13□□□□□ -1.75
USP1-202ENST00000371146 COX6B2Q6YFQ2 88 aa4.12□□□□□ -1.75
USP1-202ENST00000371146 WFDC13Q8IUB5 93 aa4.12□□□□□ -1.75
USP1-202ENST00000371146 DYNC2H1Q8NCM8 4307 aaKnown RBP4.12□□□□□ -1.75
USP1-202ENST00000371146 PCLOQ9Y6V0 5065 aa4.12□□□□□ -1.75
USP1-202ENST00000371146 H0Y9P7 68 aa4.12□□□□□ -1.75
USP1-202ENST00000371146 KRTAP13-2Q52LG2 175 aa4.11□□□□□ -1.75
USP1-202ENST00000371146 Q96NJ1 140 aa4.11□□□□□ -1.75
USP1-202ENST00000371146 MIR22HGQ0VDD5 57 aa4.11□□□□□ -1.75
USP1-202ENST00000371146 ABCA13Q86UQ4 5058 aa4.1□□□□□ -1.75
USP1-202ENST00000371146 IGFL1Q6UW32 110 aa4.1□□□□□ -1.75
USP1-202ENST00000371146 HERC1Q15751 4861 aa4.09□□□□□ -1.75
USP1-202ENST00000371146 IGLV5-37A0A075B6J1 123 aa4.09□□□□□ -1.76
USP1-202ENST00000371146 ALMS1Q8TCU4 4167 aa4.09□□□□□ -1.76
USP1-202ENST00000371146 SPATA8Q6RVD6 105 aa4.08□□□□□ -1.76
USP1-202ENST00000371146 DSCR10P59022 87 aa4.08□□□□□ -1.76
USP1-202ENST00000371146 SSBP3-AS1Q7Z2R9 100 aa4.08□□□□□ -1.76
USP1-202ENST00000371146 P0C880 135 aa4.08□□□□□ -1.76
USP1-202ENST00000371146 IGLV8-61A0A075B6I0 122 aa4.07□□□□□ -1.76
USP1-202ENST00000371146 DNAH8Q96JB1 4490 aa4.06□□□□□ -1.76
USP1-202ENST00000371146 M0R2T5 61 aa4.06□□□□□ -1.76
USP1-202ENST00000371146 SPINK1P00995 79 aa4.06□□□□□ -1.76
USP1-202ENST00000371146 KRTAP1-4P0C5Y4 121 aa4.06□□□□□ -1.76
USP1-202ENST00000371146 DNAH17Q9UFH2 4485 aa4.05□□□□□ -1.76
USP1-202ENST00000371146 SPRR1AP35321 89 aa4.05□□□□□ -1.76
USP1-202ENST00000371146 KRTAP25-1Q3LHN0 102 aa4.04□□□□□ -1.76
USP1-202ENST00000371146 LRP2P98164 4655 aa4.03□□□□□ -1.76
USP1-202ENST00000371146 KRTAP4-16G5E9R7 235 aaPredicted RBP4.02□□□□□ -1.77
USP1-202ENST00000371146 LINC00483Q53H64 154 aa4.02□□□□□ -1.77
USP1-202ENST00000371146 IGKV2D-30A0A075B6S6 120 aa4.02□□□□□ -1.77
USP1-202ENST00000371146 IGKV2-30P06310 120 aa4.02□□□□□ -1.77
USP1-202ENST00000371146 KRTAP29-1A8MX34 341 aaPredicted RBP4.01□□□□□ -1.77
USP1-202ENST00000371146 FAT2Q9NYQ8 4349 aa4.01□□□□□ -1.77
USP1-202ENST00000371146 RNF213Q63HN8 5207 aa4.01□□□□□ -1.77
USP1-202ENST00000371146 PCOTHQ58A44 107 aa4□□□□□ -1.77
USP1-202ENST00000371146 HSPG2P98160 4391 aa3.99□□□□□ -1.77
USP1-202ENST00000371146 MT1HL1P0DM35 61 aa3.99□□□□□ -1.77
USP1-202ENST00000371146 KRTAP13-1Q8IUC0 172 aa3.99□□□□□ -1.77
USP1-202ENST00000371146 C20orf166-AS1Q96NR2 134 aa3.99□□□□□ -1.77
USP1-202ENST00000371146 C8orf17Q9NRJ1 99 aa3.98□□□□□ -1.77
USP1-202ENST00000371146 A8MWP4 228 aa3.98□□□□□ -1.77
USP1-202ENST00000371146 KRTAP10-4P60372 401 aaPredicted RBP3.98□□□□□ -1.77
USP1-202ENST00000371146 KRTAP10-8P60410 259 aa3.98□□□□□ -1.77
USP1-202ENST00000371146 UQCR11O14957 56 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms