RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 C14orf132Q9NPU4 83 aa2.27□□□□□ -2.05
MCF2-203ENST00000370576 A6NED7 52 aa2.26□□□□□ -2.05
MCF2-203ENST00000370576 F8WEM9 126 aa2.26□□□□□ -2.05
MCF2-203ENST00000370576 H3BPC8 53 aa2.26□□□□□ -2.05
MCF2-203ENST00000370576 DEFB4AO15263 64 aa2.26□□□□□ -2.05
MCF2-203ENST00000370576 S100A7L2Q5SY68 101 aa2.26□□□□□ -2.05
MCF2-203ENST00000370576 KLK12Q9UKR0 248 aa2.26□□□□□ -2.05
MCF2-203ENST00000370576 IGLV7-46A0A075B6I9 117 aa2.25□□□□□ -2.05
MCF2-203ENST00000370576 A0A087WTM6 91 aa2.25□□□□□ -2.05
MCF2-203ENST00000370576 M0R2N4 97 aa2.25□□□□□ -2.05
MCF2-203ENST00000370576 ANGP03950 147 aaKnown RBP2.25□□□□□ -2.05
MCF2-203ENST00000370576 Q9BRP9 147 aa2.25□□□□□ -2.05
MCF2-203ENST00000370576 KRTAP11-1Q8IUC1 163 aa2.25□□□□□ -2.05
MCF2-203ENST00000370576 RYR1P21817 5038 aa2.25□□□□□ -2.05
MCF2-203ENST00000370576 CRPP02741 224 aa2.24□□□□□ -2.05
MCF2-203ENST00000370576 HTN1P15515 57 aa2.24□□□□□ -2.05
MCF2-203ENST00000370576 Q6ZRX8 168 aa2.24□□□□□ -2.05
MCF2-203ENST00000370576 A0A087WYN8 130 aa2.24□□□□□ -2.05
MCF2-203ENST00000370576 CSAG1Q6PB30 78 aa2.24□□□□□ -2.05
MCF2-203ENST00000370576 WNK1Q9H4A3 2382 aa2.24□□□□□ -2.05
MCF2-203ENST00000370576 H7C2G1 150 aa2.23□□□□□ -2.05
MCF2-203ENST00000370576 KRTAP10-8P60410 259 aa2.23□□□□□ -2.05
MCF2-203ENST00000370576 RPS29P62273 56 aaKnown RBP2.23□□□□□ -2.05
MCF2-203ENST00000370576 NDUFAF8A1L188 74 aa2.23□□□□□ -2.05
MCF2-203ENST00000370576 SORL1Q92673 2214 aa2.23□□□□□ -2.05
MCF2-203ENST00000370576 TRAV23DV6A0A075B6W5 121 aa2.23□□□□□ -2.05
MCF2-203ENST00000370576 ABCA13Q86UQ4 5058 aa2.23□□□□□ -2.05
MCF2-203ENST00000370576 BAALC-AS2P0C853 105 aa2.22□□□□□ -2.05
MCF2-203ENST00000370576 KRTAP25-1Q3LHN0 102 aa2.22□□□□□ -2.05
MCF2-203ENST00000370576 LIMD2Q9BT23 127 aa2.22□□□□□ -2.05
MCF2-203ENST00000370576 PRO2289Q9P1D8 64 aa2.22□□□□□ -2.05
MCF2-203ENST00000370576 A0A096LNI7 61 aa2.22□□□□□ -2.05
MCF2-203ENST00000370576 A0A1W2PNN7 141 aa2.22□□□□□ -2.05
MCF2-203ENST00000370576 C1orf137Q5JT78 98 aa2.22□□□□□ -2.05
MCF2-203ENST00000370576 PDE6GP18545 87 aa2.22□□□□□ -2.05
MCF2-203ENST00000370576 LCE5AQ5TCM9 118 aa2.22□□□□□ -2.05
MCF2-203ENST00000370576 ZCCHC13Q8WW36 166 aaKnown RBP2.22□□□□□ -2.05
MCF2-203ENST00000370576 C20orf197Q8N268 126 aa2.21□□□□□ -2.06
MCF2-203ENST00000370576 KIAA1109Q2LD37 5005 aa2.21□□□□□ -2.06
MCF2-203ENST00000370576 LOC100996750A0A140TA64 210 aa2.21□□□□□ -2.06
MCF2-203ENST00000370576 JMJD7-PLA2G4BH0Y9G9 81 aa2.21□□□□□ -2.06
MCF2-203ENST00000370576 KRTAP4-6Q9BYQ5 205 aa2.21□□□□□ -2.06
MCF2-203ENST00000370576 XP32Q5T750 250 aa2.2□□□□□ -2.06
MCF2-203ENST00000370576 Q96NJ1 140 aa2.2□□□□□ -2.06
MCF2-203ENST00000370576 NOTCH1P46531 2555 aa2.2□□□□□ -2.06
MCF2-203ENST00000370576 KRTAP1-4P0C5Y4 121 aa2.2□□□□□ -2.06
MCF2-203ENST00000370576 ATP5EP2Q5VTU8 51 aa2.2□□□□□ -2.06
MCF2-203ENST00000370576 DEFB104AQ8WTQ1 72 aa2.2□□□□□ -2.06
MCF2-203ENST00000370576 KRTAP10-2P60368 255 aa2.2□□□□□ -2.06
MCF2-203ENST00000370576 NOTCH3Q9UM47 2321 aa2.2□□□□□ -2.06
MCF2-203ENST00000370576 NBEAL2Q6ZNJ1 2754 aa2.19□□□□□ -2.06
MCF2-203ENST00000370576 CASC2Q6XLA1 102 aa2.19□□□□□ -2.06
MCF2-203ENST00000370576 TENM2Q9NT68 2774 aa2.19□□□□□ -2.06
MCF2-203ENST00000370576 COX6CP09669 75 aa2.19□□□□□ -2.06
MCF2-203ENST00000370576 COX7BP24311 80 aa2.19□□□□□ -2.06
MCF2-203ENST00000370576 ZNF861PO60384 105 aa2.18□□□□□ -2.06
MCF2-203ENST00000370576 LINC00158P58513 81 aa2.18□□□□□ -2.06
MCF2-203ENST00000370576 ORMDL1Q9P0S3 153 aa2.18□□□□□ -2.06
MCF2-203ENST00000370576 KRTAP13-3Q3SY46 172 aa2.18□□□□□ -2.06
MCF2-203ENST00000370576 TYMSOSQ8TAI1 123 aa2.18□□□□□ -2.06
MCF2-203ENST00000370576 LRP1Q07954 4544 aaKnown RBP2.18□□□□□ -2.06
MCF2-203ENST00000370576 TPRXLQ17RH7 258 aa2.17□□□□□ -2.06
MCF2-203ENST00000370576 SPTSSBQ8NFR3 76 aa2.17□□□□□ -2.06
MCF2-203ENST00000370576 CLPSL2Q6UWE3 100 aa2.17□□□□□ -2.06
MCF2-203ENST00000370576 IGKV3D-7A0A0C4DH55 119 aa2.16□□□□□ -2.06
MCF2-203ENST00000370576 IGKV3OR2-268A0A0C4DH90 116 aa2.16□□□□□ -2.06
MCF2-203ENST00000370576 KRTAP29-1A8MX34 341 aaPredicted RBP2.16□□□□□ -2.06
MCF2-203ENST00000370576 HIGD2BQ4VC39 106 aa2.16□□□□□ -2.06
MCF2-203ENST00000370576 LINC00472Q9H8W2 130 aa2.16□□□□□ -2.06
MCF2-203ENST00000370576 IGKV2D-24A0A075B6R9 120 aa2.16□□□□□ -2.06
MCF2-203ENST00000370576 LINC01558Q9Y6Z2 57 aa2.16□□□□□ -2.06
MCF2-203ENST00000370576 NCR3O14931 201 aa2.15□□□□□ -2.06
MCF2-203ENST00000370576 PSORS1C2Q9UIG4 136 aa2.15□□□□□ -2.06
MCF2-203ENST00000370576 A0A087WVE0 104 aa2.15□□□□□ -2.07
MCF2-203ENST00000370576 IGLV7-43P04211 117 aa2.15□□□□□ -2.07
MCF2-203ENST00000370576 KRTAP10-1P60331 282 aa2.15□□□□□ -2.07
MCF2-203ENST00000370576 KRTAP2-2Q9BYT5 123 aa2.15□□□□□ -2.07
MCF2-203ENST00000370576 MYCBP2O75592 4640 aa2.15□□□□□ -2.07
MCF2-203ENST00000370576 DEFB116Q30KQ4 102 aa2.15□□□□□ -2.07
MCF2-203ENST00000370576 CHKB-CPT1BH3BT56 60 aa2.14□□□□□ -2.07
MCF2-203ENST00000370576 LY6G6CO95867 125 aa2.14□□□□□ -2.07
MCF2-203ENST00000370576 HTN3P15516 51 aa2.14□□□□□ -2.07
MCF2-203ENST00000370576 LINC00846Q9NV44 126 aa2.14□□□□□ -2.07
MCF2-203ENST00000370576 TMEM254Q8TBM7 123 aa2.13□□□□□ -2.07
MCF2-203ENST00000370576 TOMM7Q9P0U1 55 aa2.13□□□□□ -2.07
MCF2-203ENST00000370576 FLGP20930 4061 aaPredicted RBP2.13□□□□□ -2.07
MCF2-203ENST00000370576 KRTAP13-2Q52LG2 175 aa2.13□□□□□ -2.07
MCF2-203ENST00000370576 IGFL1Q6UW32 110 aa2.13□□□□□ -2.07
MCF2-203ENST00000370576 IGKV4-1P06312 121 aa2.12□□□□□ -2.07
MCF2-203ENST00000370576 R4GN34 69 aa2.12□□□□□ -2.07
MCF2-203ENST00000370576 DSCR10P59022 87 aa2.12□□□□□ -2.07
MCF2-203ENST00000370576 SPINK6Q6UWN8 80 aa2.12□□□□□ -2.07
MCF2-203ENST00000370576 Q6ZQY7 126 aa2.12□□□□□ -2.07
MCF2-203ENST00000370576 SSBP3-AS1Q7Z2R9 100 aa2.12□□□□□ -2.07
MCF2-203ENST00000370576 DMAC1Q96GE9 116 aa2.12□□□□□ -2.07
MCF2-203ENST00000370576 SPINK7P58062 85 aa2.11□□□□□ -2.07
MCF2-203ENST00000370576 SPATA8Q6RVD6 105 aa2.11□□□□□ -2.07
MCF2-203ENST00000370576 SNURFQ9Y675 71 aa2.11□□□□□ -2.07
MCF2-203ENST00000370576 STAB2Q8WWQ8 2551 aa2.1□□□□□ -2.07
MCF2-203ENST00000370576 UBE2DNLQ8IWF7 75 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms