RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 TP53AIP1Q9HCN2 124 aa7.37□□□□□ -1.23
PHGDH-201ENST00000369407 PLECQ15149 4684 aaKnown RBP7.37□□□□□ -1.23
PHGDH-201ENST00000369407 CDK2AP2O75956 126 aa7.37□□□□□ -1.23
PHGDH-201ENST00000369407 KRTAP13-1Q8IUC0 172 aa7.37□□□□□ -1.23
PHGDH-201ENST00000369407 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
PHGDH-201ENST00000369407 A0A1B0GVX0 72 aa7.36□□□□□ -1.23
PHGDH-201ENST00000369407 Q6ZR54 194 aa7.36□□□□□ -1.23
PHGDH-201ENST00000369407 RETNLBQ9BQ08 111 aa7.36□□□□□ -1.23
PHGDH-201ENST00000369407 ASB16-AS1Q495Z4 193 aa7.36□□□□□ -1.23
PHGDH-201ENST00000369407 MRPL34Q9BQ48 92 aaKnown RBP7.35□□□□□ -1.23
PHGDH-201ENST00000369407 DNAH8Q96JB1 4490 aa7.35□□□□□ -1.23
PHGDH-201ENST00000369407 Q5W150 140 aa7.34□□□□□ -1.23
PHGDH-201ENST00000369407 PLAC8Q9NZF1 115 aa7.34□□□□□ -1.23
PHGDH-201ENST00000369407 C14orf177Q52M58 125 aa7.33□□□□□ -1.24
PHGDH-201ENST00000369407 CSAG1Q6PB30 78 aa7.33□□□□□ -1.24
PHGDH-201ENST00000369407 APLNQ9ULZ1 77 aa7.3□□□□□ -1.24
PHGDH-201ENST00000369407 WWC2-AS2Q96NR7 200 aa7.29□□□□□ -1.24
PHGDH-201ENST00000369407 PSORS1C2Q9UIG4 136 aa7.27□□□□□ -1.25
PHGDH-201ENST00000369407 ZNF706Q9Y5V0 76 aaPredicted RBP7.27□□□□□ -1.25
PHGDH-201ENST00000369407 SPACA4Q8TDM5 124 aa7.26□□□□□ -1.25
PHGDH-201ENST00000369407 NBDYA0A0U1RRE5 68 aa7.25□□□□□ -1.25
PHGDH-201ENST00000369407 LINC00483Q53H64 154 aa7.24□□□□□ -1.25
PHGDH-201ENST00000369407 CIRBP-AS1Q8TBR5 109 aa7.24□□□□□ -1.25
PHGDH-201ENST00000369407 TGP01266 2768 aa7.24□□□□□ -1.25
PHGDH-201ENST00000369407 A0A1B0GU69 56 aa7.24□□□□□ -1.25
PHGDH-201ENST00000369407 DNAH17Q9UFH2 4485 aa7.23□□□□□ -1.25
PHGDH-201ENST00000369407 Q6ZRN7 208 aaPredicted RBP7.22□□□□□ -1.25
PHGDH-201ENST00000369407 HECTD4Q9Y4D8 3996 aa7.22□□□□□ -1.25
PHGDH-201ENST00000369407 PLA2G1BP04054 148 aaKnown RBP7.22□□□□□ -1.25
PHGDH-201ENST00000369407 IGLV5-52A0A0A0MRZ9 124 aa7.19□□□□□ -1.26
PHGDH-201ENST00000369407 ALMS1Q8TCU4 4167 aa7.19□□□□□ -1.26
PHGDH-201ENST00000369407 KRTAP13-3Q3SY46 172 aa7.19□□□□□ -1.26
PHGDH-201ENST00000369407 C1orf134Q5TEV5 83 aa7.19□□□□□ -1.26
PHGDH-201ENST00000369407 STARD9Q9P2P6 4700 aa7.19□□□□□ -1.26
PHGDH-201ENST00000369407 ACYP2P14621 99 aa7.18□□□□□ -1.26
PHGDH-201ENST00000369407 KMT2AQ03164 3969 aa7.18□□□□□ -1.26
PHGDH-201ENST00000369407 ZNF861PO60384 105 aa7.18□□□□□ -1.26
PHGDH-201ENST00000369407 MIR22HGQ0VDD5 57 aa7.18□□□□□ -1.26
PHGDH-201ENST00000369407 DYNC2H1Q8NCM8 4307 aaKnown RBP7.17□□□□□ -1.26
PHGDH-201ENST00000369407 DNAH2Q9P225 4427 aa7.16□□□□□ -1.26
PHGDH-201ENST00000369407 RTL8CO15255 209 aa7.16□□□□□ -1.26
PHGDH-201ENST00000369407 A0A087WTM6 91 aa7.15□□□□□ -1.26
PHGDH-201ENST00000369407 FBN3Q75N90 2809 aa7.14□□□□□ -1.27
PHGDH-201ENST00000369407 DMBT1Q9UGM3 2413 aaPredicted RBP7.13□□□□□ -1.27
PHGDH-201ENST00000369407 VPS13DQ5THJ4 4388 aa7.12□□□□□ -1.27
PHGDH-201ENST00000369407 MEGF8Q7Z7M0 2845 aa7.12□□□□□ -1.27
PHGDH-201ENST00000369407 CRIPTQ9P021 101 aa7.12□□□□□ -1.27
PHGDH-201ENST00000369407 DMAC1Q96GE9 116 aa7.11□□□□□ -1.27
PHGDH-201ENST00000369407 SPINK1P00995 79 aa7.1□□□□□ -1.27
PHGDH-201ENST00000369407 UQCR11O14957 56 aa7.1□□□□□ -1.27
PHGDH-201ENST00000369407 DNAH6Q9C0G6 4158 aa7.08□□□□□ -1.28
PHGDH-201ENST00000369407 IGKV2D-30A0A075B6S6 120 aa7.08□□□□□ -1.28
PHGDH-201ENST00000369407 IGKV2-30P06310 120 aa7.08□□□□□ -1.28
PHGDH-201ENST00000369407 IGLV7-43P04211 117 aa7.07□□□□□ -1.28
PHGDH-201ENST00000369407 DNAH11Q96DT5 4516 aa7.06□□□□□ -1.28
PHGDH-201ENST00000369407 SPATA8Q6RVD6 105 aa7.04□□□□□ -1.28
PHGDH-201ENST00000369407 FAM229AH3BQW9 127 aa7.04□□□□□ -1.28
PHGDH-201ENST00000369407 NUPR2A6NF83 97 aa7.02□□□□□ -1.29
PHGDH-201ENST00000369407 PRKDCP78527 4128 aaKnown RBP7.01□□□□□ -1.29
PHGDH-201ENST00000369407 DNHD1Q96M86 4753 aa6.98□□□□□ -1.29
PHGDH-201ENST00000369407 LRP1BQ9NZR2 4599 aa6.98□□□□□ -1.29
PHGDH-201ENST00000369407 KRTAP13-2Q52LG2 175 aa6.97□□□□□ -1.29
PHGDH-201ENST00000369407 SSBP3-AS1Q7Z2R9 100 aa6.97□□□□□ -1.29
PHGDH-201ENST00000369407 ROMO1P60602 79 aa6.96□□□□□ -1.3
PHGDH-201ENST00000369407 DNAH5Q8TE73 4624 aa6.96□□□□□ -1.3
PHGDH-201ENST00000369407 Q8N1X5 172 aa6.96□□□□□ -1.3
PHGDH-201ENST00000369407 KRTAP16-1A8MUX0 517 aa6.95□□□□□ -1.3
PHGDH-201ENST00000369407 KRTAP10-2P60368 255 aa6.91□□□□□ -1.3
PHGDH-201ENST00000369407 LY6G6CO95867 125 aa6.88□□□□□ -1.31
PHGDH-201ENST00000369407 KRTAP25-1Q3LHN0 102 aa6.87□□□□□ -1.31
PHGDH-201ENST00000369407 VPS13BQ7Z7G8 4022 aa6.85□□□□□ -1.31
PHGDH-201ENST00000369407 A8MUU9 505 aa6.83□□□□□ -1.32
PHGDH-201ENST00000369407 SPINT4Q6UDR6 99 aa6.81□□□□□ -1.32
PHGDH-201ENST00000369407 FAT2Q9NYQ8 4349 aa6.8□□□□□ -1.32
PHGDH-201ENST00000369407 P0C880 135 aa6.8□□□□□ -1.32
PHGDH-201ENST00000369407 KRTAP1-4P0C5Y4 121 aa6.8□□□□□ -1.32
PHGDH-201ENST00000369407 KRTAP10-1P60331 282 aa6.8□□□□□ -1.32
PHGDH-201ENST00000369407 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
PHGDH-201ENST00000369407 LINC00304Q8N9R0 145 aa6.79□□□□□ -1.32
PHGDH-201ENST00000369407 Q6ZSA8 131 aa6.79□□□□□ -1.32
PHGDH-201ENST00000369407 H0YAA0 97 aa6.78□□□□□ -1.32
PHGDH-201ENST00000369407 HYDINQ4G0P3 5121 aa6.78□□□□□ -1.32
PHGDH-201ENST00000369407 C9orf92A6NGG3 77 aa6.74□□□□□ -1.33
PHGDH-201ENST00000369407 PKD1P98161 4303 aa6.74□□□□□ -1.33
PHGDH-201ENST00000369407 NDUFAF8A1L188 74 aa6.72□□□□□ -1.33
PHGDH-201ENST00000369407 A0A1B0GU33 70 aa6.68□□□□□ -1.34
PHGDH-201ENST00000369407 KRTAP3-1Q9BYR8 98 aa6.67□□□□□ -1.34
PHGDH-201ENST00000369407 PKHD1P08F94 4074 aa6.65□□□□□ -1.35
PHGDH-201ENST00000369407 K7ERS5 55 aa6.64□□□□□ -1.35
PHGDH-201ENST00000369407 A0A0A0MQY5 61 aa6.62□□□□□ -1.35
PHGDH-201ENST00000369407 H1FX-AS1Q4G0G2 97 aa6.62□□□□□ -1.35
PHGDH-201ENST00000369407 FAT1Q14517 4588 aa6.6□□□□□ -1.35
PHGDH-201ENST00000369407 SMR3BP02814 79 aaPredicted RBP6.6□□□□□ -1.35
PHGDH-201ENST00000369407 A0A0D9SG42 100 aa6.59□□□□□ -1.35
PHGDH-201ENST00000369407 C10orf95Q9H7T3 257 aa6.59□□□□□ -1.35
PHGDH-201ENST00000369407 SACSQ9NZJ4 4579 aa6.53□□□□□ -1.36
PHGDH-201ENST00000369407 COX6B2Q6YFQ2 88 aa6.53□□□□□ -1.36
PHGDH-201ENST00000369407 C20orf166-AS1Q96NR2 134 aa6.53□□□□□ -1.36
PHGDH-201ENST00000369407 DYNC1H1Q14204 4646 aaKnown RBP6.48□□□□□ -1.37
PHGDH-201ENST00000369407 TPRXLQ17RH7 258 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms