RNA–Protein interactions for RNA: ENST00000368453.8

SHC1-205, Transcript of SHC adaptor protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHC1, Length 3,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-205ENST00000368453 PLA2G1BP04054 148 aaKnown RBP8.89□□□□□ -0.99
SHC1-205ENST00000368453 MIR22HGQ0VDD5 57 aa8.89□□□□□ -0.99
SHC1-205ENST00000368453 CIRBP-AS1Q8TBR5 109 aa8.89□□□□□ -0.99
SHC1-205ENST00000368453 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.89□□□□□ -0.99
SHC1-205ENST00000368453 MGAM2Q2M2H8 2515 aa8.88□□□□□ -0.99
SHC1-205ENST00000368453 WWC2-AS2Q96NR7 200 aa8.87□□□□□ -0.99
SHC1-205ENST00000368453 H3BS24 57 aa8.87□□□□□ -0.99
SHC1-205ENST00000368453 ZNF706Q9Y5V0 76 aaPredicted RBP8.85□□□□□ -0.99
SHC1-205ENST00000368453 UQCR11O14957 56 aa8.85□□□□□ -0.99
SHC1-205ENST00000368453 LYSTQ99698 3801 aa8.84□□□□□ -0.99
SHC1-205ENST00000368453 DNAH1Q9P2D7 4330 aa8.84□□□□□ -0.99
SHC1-205ENST00000368453 CSAG1Q6PB30 78 aa8.83□□□□□ -1
SHC1-205ENST00000368453 KRTAP24-1Q3LI83 254 aa8.82□□□□□ -1
SHC1-205ENST00000368453 SPATA8Q6RVD6 105 aa8.82□□□□□ -1
SHC1-205ENST00000368453 PSORS1C2Q9UIG4 136 aa8.82□□□□□ -1
SHC1-205ENST00000368453 DMAC1Q96GE9 116 aa8.82□□□□□ -1
SHC1-205ENST00000368453 RTL8CO15255 209 aa8.8□□□□□ -1
SHC1-205ENST00000368453 LINC00483Q53H64 154 aa8.8□□□□□ -1
SHC1-205ENST00000368453 SPINK1P00995 79 aa8.78□□□□□ -1
SHC1-205ENST00000368453 KRTAP13-3Q3SY46 172 aa8.78□□□□□ -1
SHC1-205ENST00000368453 IGKV2D-30A0A075B6S6 120 aa8.77□□□□□ -1.01
SHC1-205ENST00000368453 IGKV2-30P06310 120 aa8.77□□□□□ -1.01
SHC1-205ENST00000368453 DNAH9Q9NYC9 4486 aa8.77□□□□□ -1.01
SHC1-205ENST00000368453 SPACA4Q8TDM5 124 aa8.76□□□□□ -1.01
SHC1-205ENST00000368453 ZNF861PO60384 105 aa8.74□□□□□ -1.01
SHC1-205ENST00000368453 NBDYA0A0U1RRE5 68 aa8.73□□□□□ -1.01
SHC1-205ENST00000368453 FAM229AH3BQW9 127 aa8.73□□□□□ -1.01
SHC1-205ENST00000368453 APLNQ9ULZ1 77 aa8.73□□□□□ -1.01
SHC1-205ENST00000368453 IGLV5-52A0A0A0MRZ9 124 aa8.72□□□□□ -1.01
SHC1-205ENST00000368453 HUWE1Q7Z6Z7 4374 aaKnown RBP8.68□□□□□ -1.02
SHC1-205ENST00000368453 TGP01266 2768 aa8.65□□□□□ -1.03
SHC1-205ENST00000368453 FLG2Q5D862 2391 aaPredicted RBP8.64□□□□□ -1.03
SHC1-205ENST00000368453 ALMS1Q8TCU4 4167 aa8.63□□□□□ -1.03
SHC1-205ENST00000368453 Q6ZRN7 208 aaPredicted RBP8.62□□□□□ -1.03
SHC1-205ENST00000368453 A0A087WTM6 91 aa8.61□□□□□ -1.03
SHC1-205ENST00000368453 FRAS1Q86XX4 4008 aa8.61□□□□□ -1.03
SHC1-205ENST00000368453 Q8N1X5 172 aa8.59□□□□□ -1.03
SHC1-205ENST00000368453 IGLV7-43P04211 117 aa8.58□□□□□ -1.04
SHC1-205ENST00000368453 C1orf134Q5TEV5 83 aa8.58□□□□□ -1.04
SHC1-205ENST00000368453 CMYA5Q8N3K9 4069 aa8.57□□□□□ -1.04
SHC1-205ENST00000368453 SSBP3-AS1Q7Z2R9 100 aa8.55□□□□□ -1.04
SHC1-205ENST00000368453 DNAH7Q8WXX0 4024 aa8.55□□□□□ -1.04
SHC1-205ENST00000368453 DNAH8Q96JB1 4490 aa8.53□□□□□ -1.04
SHC1-205ENST00000368453 FBN3Q75N90 2809 aa8.52□□□□□ -1.05
SHC1-205ENST00000368453 MEGF8Q7Z7M0 2845 aa8.51□□□□□ -1.05
SHC1-205ENST00000368453 CRIPTQ9P021 101 aa8.49□□□□□ -1.05
SHC1-205ENST00000368453 DNAH3Q8TD57 4116 aa8.46□□□□□ -1.06
SHC1-205ENST00000368453 NUPR2A6NF83 97 aa8.45□□□□□ -1.06
SHC1-205ENST00000368453 PLECQ15149 4684 aaKnown RBP8.44□□□□□ -1.06
SHC1-205ENST00000368453 KRTAP16-1A8MUX0 517 aa8.43□□□□□ -1.06
SHC1-205ENST00000368453 Q6ZSA8 131 aa8.42□□□□□ -1.06
SHC1-205ENST00000368453 KRTAP25-1Q3LHN0 102 aa8.41□□□□□ -1.06
SHC1-205ENST00000368453 H0YAA0 97 aa8.41□□□□□ -1.06
SHC1-205ENST00000368453 LY6G6CO95867 125 aa8.4□□□□□ -1.06
SHC1-205ENST00000368453 KRTAP13-2Q52LG2 175 aa8.4□□□□□ -1.06
SHC1-205ENST00000368453 LINC00304Q8N9R0 145 aa8.4□□□□□ -1.06
SHC1-205ENST00000368453 A8MUU9 505 aa8.38□□□□□ -1.07
SHC1-205ENST00000368453 TYMSOSQ8TAI1 123 aa8.38□□□□□ -1.07
SHC1-205ENST00000368453 ROMO1P60602 79 aa8.37□□□□□ -1.07
SHC1-205ENST00000368453 DNAH17Q9UFH2 4485 aa8.37□□□□□ -1.07
SHC1-205ENST00000368453 A0A1B0GU33 70 aa8.36□□□□□ -1.07
SHC1-205ENST00000368453 DMBT1Q9UGM3 2413 aaPredicted RBP8.33□□□□□ -1.08
SHC1-205ENST00000368453 HECTD4Q9Y4D8 3996 aa8.28□□□□□ -1.08
SHC1-205ENST00000368453 K7ERS5 55 aa8.28□□□□□ -1.08
SHC1-205ENST00000368453 H1FX-AS1Q4G0G2 97 aa8.25□□□□□ -1.09
SHC1-205ENST00000368453 KRTAP10-2P60368 255 aa8.23□□□□□ -1.09
SHC1-205ENST00000368453 KMT2AQ03164 3969 aa8.23□□□□□ -1.09
SHC1-205ENST00000368453 C9orf92A6NGG3 77 aa8.21□□□□□ -1.09
SHC1-205ENST00000368453 STARD9Q9P2P6 4700 aa8.2□□□□□ -1.1
SHC1-205ENST00000368453 VPS13DQ5THJ4 4388 aa8.17□□□□□ -1.1
SHC1-205ENST00000368453 KRTAP1-4P0C5Y4 121 aa8.16□□□□□ -1.1
SHC1-205ENST00000368453 SPINT4Q6UDR6 99 aa8.15□□□□□ -1.1
SHC1-205ENST00000368453 DNAH2Q9P225 4427 aa8.14□□□□□ -1.11
SHC1-205ENST00000368453 P0C880 135 aa8.14□□□□□ -1.11
SHC1-205ENST00000368453 DYNC2H1Q8NCM8 4307 aaKnown RBP8.12□□□□□ -1.11
SHC1-205ENST00000368453 DNAH6Q9C0G6 4158 aa8.12□□□□□ -1.11
SHC1-205ENST00000368453 DNAH11Q96DT5 4516 aa8.12□□□□□ -1.11
SHC1-205ENST00000368453 KRTAP10-1P60331 282 aa8.11□□□□□ -1.11
SHC1-205ENST00000368453 KRTAP3-1Q9BYR8 98 aa8.11□□□□□ -1.11
SHC1-205ENST00000368453 COX6B2Q6YFQ2 88 aa8.11□□□□□ -1.11
SHC1-205ENST00000368453 A0A0D9SG42 100 aa8.1□□□□□ -1.11
SHC1-205ENST00000368453 LRP1BQ9NZR2 4599 aa8.05□□□□□ -1.12
SHC1-205ENST00000368453 RPL37P61927 97 aaKnown RBP7.98□□□□□ -1.13
SHC1-205ENST00000368453 C10orf95Q9H7T3 257 aa7.98□□□□□ -1.13
SHC1-205ENST00000368453 DNAH5Q8TE73 4624 aa7.95□□□□□ -1.14
SHC1-205ENST00000368453 NDUFAF8A1L188 74 aa7.94□□□□□ -1.14
SHC1-205ENST00000368453 TPRXLQ17RH7 258 aa7.94□□□□□ -1.14
SHC1-205ENST00000368453 VPS13BQ7Z7G8 4022 aa7.92□□□□□ -1.14
SHC1-205ENST00000368453 C20orf166-AS1Q96NR2 134 aa7.92□□□□□ -1.14
SHC1-205ENST00000368453 SMR3BP02814 79 aaPredicted RBP7.91□□□□□ -1.14
SHC1-205ENST00000368453 PRKDCP78527 4128 aaKnown RBP7.9□□□□□ -1.15
SHC1-205ENST00000368453 KRTAP13-4Q3LI77 160 aa7.87□□□□□ -1.15
SHC1-205ENST00000368453 KRTAP10-6P60371 365 aaPredicted RBP7.8□□□□□ -1.16
SHC1-205ENST00000368453 RPS29P62273 56 aaKnown RBP7.79□□□□□ -1.16
SHC1-205ENST00000368453 FAT2Q9NYQ8 4349 aa7.73□□□□□ -1.17
SHC1-205ENST00000368453 S4R3F8 94 aa7.72□□□□□ -1.17
SHC1-205ENST00000368453 KRTAP15-1Q3LI76 137 aa7.71□□□□□ -1.17
SHC1-205ENST00000368453 KRTAP3-3Q9BYR6 98 aa7.69□□□□□ -1.18
SHC1-205ENST00000368453 KRTAP3-2Q9BYR7 98 aa7.68□□□□□ -1.18
SHC1-205ENST00000368453 KRTAP12-2P59991 146 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms